Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre17.g727300.t1.2
CDS Infomation

pacid=30781808 polypeptide=Cre17.g727300.t1.2 locus=Cre17.g727300 ID=Cre17.g727300.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCCGCCTTGCCAATGGCCTCGTCGCTCATTGCTCCACTCAAGGTTGGGGCCCAGCAG
CTCGCGCACCGCATTTCCATGTCTGCTATGACACGACTCCGCATGTCGCCCGGCACGGAG
CTGCCAAACGACCTCGTGGCGCAGTACTACGAGCAACGCGCATCCAAGGGCGGACTGCTG
GTGACCGAGTGCGCCTACGTGCGACCGGACGGCCGCGGTTACGTCAGGGCGCCCGGCTTG
GCCACTGAAGCTCAGGCCACTGCTTGGAAGCCGGTGGTGCAGAAGGTTCACGGGAAGGGC
GGCATCCTGTACGCGCAGCTGTTCCACGCGGGTCGCGTGTCCCACAGCAGCCTGGTGGGC
AGCAAGCCCACGGTGTGCGCCAGCCCGGTGGGCATGGCGGGCAACCTGTACGTGGAGGGC
GGCGTTAAGGCCGACTACGAGGTGCCGCGTGCGCTCAGCACGGAGGAGGTGGAGCAGGTG
CCCAAGGACTTCGCGGCAGCGGCGCTGCGTGCCATCCAGGCCGGCGGCTTCGACGGCATT
GAGATCCACGGCGGCAACGGCTACCTGCTGCAGGCCTTCATGGCCCAGAAGACGAACCAG
CGCACCGACAAGTACGGCGGCTCGGTGGCCAACCGCTGCCGCCTGCTGCTGGAGACCGTT
GACGCGGTGGCGGCGGCGGTGGGGCCGGAGCGCACAGCCGTCAAGATCCAGCCGGGCATC
ACGTTCTCCGACCTGATTGAGCCGGAGGCCGACGTCAAGGAGACGCTTGAGTACCTGGGC
CCGGAGCTTTCCAAGCGCAACCTGGCGTACGTGTGCCTGTCGACCCTCAACAGCGAGCCG
TACTTCAGGTTCCTGGGCCTGTCGGAGCCGAACATCAAGTTCGACCCCTTCCGCCTCTTC
CGGAACACCTTCACCGGCACAGTCATGGCCAACGGCGGTATCAGCATCGAGGCGGGCGAG
GAGCTGGTCAAGAGCGGCACTGCGGACCTGGTGGCCTACGGGGTTCCGTTCATCGCCAAC
GCCAACCTGCCCGCCCTGGTGGCGGCTGGCGTCAAGACCGCGGGCCTCAACCCCGGTGGC
TTTGATGCCAAGGTGTGGTACGCCAAGGACCCTGCCAAGGACGTGATCGGCTTCACGGAC
TGGCCGCGGGTGGACCCCGCCACGATCAAGGCCTAG

Peptide Sequence

PEP ID

Cre17.g727300.t1.2
PEP Infomation

pacid=30781808 transcript=Cre17.g727300.t1.2 locus=Cre17.g727300 ID=Cre17.g727300.t1.2.v5.5 annot-version=v5.6
Sequence

MAALPMASSLIAPLKVGAQQLAHRISMSAMTRLRMSPGTELPNDLVAQYYEQRASKGGLL
VTECAYVRPDGRGYVRAPGLATEAQATAWKPVVQKVHGKGGILYAQLFHAGRVSHSSLVG
SKPTVCASPVGMAGNLYVEGGVKADYEVPRALSTEEVEQVPKDFAAAALRAIQAGGFDGI
EIHGGNGYLLQAFMAQKTNQRTDKYGGSVANRCRLLLETVDAVAAAVGPERTAVKIQPGI
TFSDLIEPEADVKETLEYLGPELSKRNLAYVCLSTLNSEPYFRFLGLSEPNIKFDPFRLF
RNTFTGTVMANGGISIEAGEELVKSGTADLVAYGVPFIANANLPALVAAGVKTAGLNPGG
FDAKVWYAKDPAKDVIGFTDWPRVDPATIKA*

Transcript Sequence

Transcript ID

Cre17.g727300.t1.2
Transcript Infomation

pacid=30781808 locus=Cre17.g727300 annot-version=v5.6
Sequence

TCAACACGCGCATTTAGAGTGCATGCGCGGGCAACGCTAACAGGTGCTAACGCAGGCGTC
GAAGGAGCCTGCGCCTCACATTGTAAATACTGTGCATGTGCATTTCCATGTGCATACTAG
ACTCATTTGGCCGTCTCGCCCGCCGTGCCCCCTAGTTGACGACGCTCGAACTCGGATTAT
CAGATTACGCGTGAGGTATGGGCCCTTACTTGGCCTCATCTTATAAGGCCCTTTCTCCTT
GAAAGTCTATTGGTAAAGACCATTACGACGTGGTGAAGAAGTCGACTGTTCACAGCGCTA
AGACTACGCGAGGACACTAGTGTCGAGACGCAAGAGCTTGCGAGCAGCTCCAAACAACAC
AGTCCACACATTACGCCTGCTAACTCAAGACTCAGACATGGCCGCCTTGCCAATGGCCTC
GTCGCTCATTGCTCCACTCAAGGTTGGGGCCCAGCAGCTCGCGCACCGCATTTCCATGTC
TGCTATGACACGACTCCGCATGTCGCCCGGCACGGAGCTGCCAAACGACCTCGTGGCGCA
GTACTACGAGCAACGCGCATCCAAGGGCGGACTGCTGGTGACCGAGTGCGCCTACGTGCG
ACCGGACGGCCGCGGTTACGTCAGGGCGCCCGGCTTGGCCACTGAAGCTCAGGCCACTGC
TTGGAAGCCGGTGGTGCAGAAGGTTCACGGGAAGGGCGGCATCCTGTACGCGCAGCTGTT
CCACGCGGGTCGCGTGTCCCACAGCAGCCTGGTGGGCAGCAAGCCCACGGTGTGCGCCAG
CCCGGTGGGCATGGCGGGCAACCTGTACGTGGAGGGCGGCGTTAAGGCCGACTACGAGGT
GCCGCGTGCGCTCAGCACGGAGGAGGTGGAGCAGGTGCCCAAGGACTTCGCGGCAGCGGC
GCTGCGTGCCATCCAGGCCGGCGGCTTCGACGGCATTGAGATCCACGGCGGCAACGGCTA
CCTGCTGCAGGCCTTCATGGCCCAGAAGACGAACCAGCGCACCGACAAGTACGGCGGCTC
GGTGGCCAACCGCTGCCGCCTGCTGCTGGAGACCGTTGACGCGGTGGCGGCGGCGGTGGG
GCCGGAGCGCACAGCCGTCAAGATCCAGCCGGGCATCACGTTCTCCGACCTGATTGAGCC
GGAGGCCGACGTCAAGGAGACGCTTGAGTACCTGGGCCCGGAGCTTTCCAAGCGCAACCT
GGCGTACGTGTGCCTGTCGACCCTCAACAGCGAGCCGTACTTCAGGTTCCTGGGCCTGTC
GGAGCCGAACATCAAGTTCGACCCCTTCCGCCTCTTCCGGAACACCTTCACCGGCACAGT
CATGGCCAACGGCGGTATCAGCATCGAGGCGGGCGAGGAGCTGGTCAAGAGCGGCACTGC
GGACCTGGTGGCCTACGGGGTTCCGTTCATCGCCAACGCCAACCTGCCCGCCCTGGTGGC
GGCTGGCGTCAAGACCGCGGGCCTCAACCCCGGTGGCTTTGATGCCAAGGTGTGGTACGC
CAAGGACCCTGCCAAGGACGTGATCGGCTTCACGGACTGGCCGCGGGTGGACCCCGCCAC
GATCAAGGCCTAGGCCTGACGTGCGTGCGTTTCGTTGTGACGCCCATCAGGGAAACTACT
GCTTGCACAGTTCGGCAGAATTGCTAGCGTTGGTAGCACACACGCACCCAAGCATCAGGG
CCCAAAGCACTGGGGGCGTTGAGCATCGGGCGGGCATTGTGACTTGTCTCGTATTATCGT
GTCCAATTTGCCCAACGCTGTTTAAATTATCGAGTTGGCGCAAAGACAAGGCTGTTCATC
AAAGGCTCTCGGGTATTAGTGTGATCCATTGTGCATTGCAATCCACCAGAGCTGACCAGA
GCTGCTCATTAGAACGGCACTGCTTCAGGCCGGATGCTGGCTTGGGCGCTCGGCACCACG
TGTAGTTCTGGCGTGGTGGGATAGCGTGGTGCCGCAGGCCCGACCATGCGCTCAACCTTG
TGAACTAAACACTTGCAGACTGCACAACGCAGCACGGGCTCGCCCTTGTAACAAACACGC
CAACAAGCGGCCATGCTTCACTCGTACAG