Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre17.g709950.t1.2
CDS Infomation

pacid=30782557 polypeptide=Cre17.g709950.t1.2 locus=Cre17.g709950 ID=Cre17.g709950.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCCCGCTCCGGCCTTTCTCCAAAAGCTGCTTGCGGAAAAGCCCAAGACACCGTCAGAG
GTTGTCAGCAAGCTTACAGCTGCGTTTGAGGCCCTACAAGCAGCCCGGAGCGGCCGGGAT
GAGAAGGCGCTTGACAAGGCGCACGAGTCTGTCGCCAAGTACCTGGGGTACGCCAAGCTA
GTGCTCTTTGGCGACGAGGAGCACGAGGCGACAAAGGAAAACGCGCTGGCGCTGGCCCAG
GAGGCAGGCCGGACGGACTTGCTTTCGCTGATCGTAAAGAACCTGGCGGACCTTGAATTC
GAGTCGCGCAAAGACGCGGCCCAGGTGTTCGGCGCCATCATCCGCATCAAAGACAACGAT
GAACGGGGGCCAGGAGCCGCCTACGTGCTGGCCCATCCGGAGATTCCGACGCTGCTGTTC
GTTGGCTATGATGAGGCCGCCATCGCGCTCAACTGCGGCGCCATGCTGCGGGACTGCTTG
CGAGACGACCAAATCGCCAAGAAGGTGCTAGACGGGCCGGTGTTTCTCAAATTCTTCGAC
AAGGTGGAGGTGGCGAATTTCGAAATCGCTTCGGACGCGTTCAGCACGTTCAAGGACCTG
TTGACGCGGCACAAGGCGGTGGTGGCTCAGTACCTGCAGGAGCACTACACGGAGTTCTTC
GGGGCGTACATCCGGTTACTGCAGTCCACCAACTACGTCGTGCGGCGGCAGTCGCTTAAG
CTGTTGGGCGAGCTGCTTCTGGACCGCACCAACGTCAAGGTGATGCTCAAGTTCGTGAGC
GACGTGCAGCACCTGATGACCATGATGGTGCTACTCAAGGACCAGAGCCGATCCATCCAG
TTCGAGGCCTTCCACGTGTTCAAGGTGTTTGTGGCCAACCCCAACAAGCCCCAGCCCATT
GTGGACATCCTGGCCAACAACCGCGAGAAGCTGCTCAAGTACCTGGAGGACTTCCACACC
GAGAAGGAGGAGGACGAGCAGTTCAAGGAGGAGAAGGCGGTCATCATCAAAACAATATCC
ATGCTCGGCAACCCGGCGCCCGCGCCGGCGCCAGCACCCGCCGCGGCCGCCCCGCCGGCA
GCAGCACCGGCGCCAGCCCCGGCGCCCGCGCCAGCAGCACCCGCGTCCTCGCCACCGCAG
GGGTCATAG

Peptide Sequence

PEP ID

Cre17.g709950.t1.2
PEP Infomation

pacid=30782557 transcript=Cre17.g709950.t1.2 locus=Cre17.g709950 ID=Cre17.g709950.t1.2.v5.5 annot-version=v5.6
Sequence

MPAPAFLQKLLAEKPKTPSEVVSKLTAAFEALQAARSGRDEKALDKAHESVAKYLGYAKL
VLFGDEEHEATKENALALAQEAGRTDLLSLIVKNLADLEFESRKDAAQVFGAIIRIKDND
ERGPGAAYVLAHPEIPTLLFVGYDEAAIALNCGAMLRDCLRDDQIAKKVLDGPVFLKFFD
KVEVANFEIASDAFSTFKDLLTRHKAVVAQYLQEHYTEFFGAYIRLLQSTNYVVRRQSLK
LLGELLLDRTNVKVMLKFVSDVQHLMTMMVLLKDQSRSIQFEAFHVFKVFVANPNKPQPI
VDILANNREKLLKYLEDFHTEKEEDEQFKEEKAVIIKTISMLGNPAPAPAPAPAAAAPPA
AAPAPAPAPAPAAPASSPPQGS*

Transcript Sequence

Transcript ID

Cre17.g709950.t1.2
Transcript Infomation

pacid=30782557 locus=Cre17.g709950 annot-version=v5.6
Sequence

ATTGCGTATTAACTAACAGAAATCATCATTCCTAGCTGTTGCTTTCTTGAAGCTGCTTGG
GCAGGGCGGGGCCGGAACGCCGCCTGCCTGCTTGGGACGCTAGGAAATGCCACTTGAAGT
CTTTTACCTATAGCTTAGTCCTGGGCCGTCGTGGCGTCGAACTAGGGGGCAACCATGCCC
GCTCCGGCCTTTCTCCAAAAGCTGCTTGCGGAAAAGCCCAAGACACCGTCAGAGGTTGTC
AGCAAGCTTACAGCTGCGTTTGAGGCCCTACAAGCAGCCCGGAGCGGCCGGGATGAGAAG
GCGCTTGACAAGGCGCACGAGTCTGTCGCCAAGTACCTGGGGTACGCCAAGCTAGTGCTC
TTTGGCGACGAGGAGCACGAGGCGACAAAGGAAAACGCGCTGGCGCTGGCCCAGGAGGCA
GGCCGGACGGACTTGCTTTCGCTGATCGTAAAGAACCTGGCGGACCTTGAATTCGAGTCG
CGCAAAGACGCGGCCCAGGTGTTCGGCGCCATCATCCGCATCAAAGACAACGATGAACGG
GGGCCAGGAGCCGCCTACGTGCTGGCCCATCCGGAGATTCCGACGCTGCTGTTCGTTGGC
TATGATGAGGCCGCCATCGCGCTCAACTGCGGCGCCATGCTGCGGGACTGCTTGCGAGAC
GACCAAATCGCCAAGAAGGTGCTAGACGGGCCGGTGTTTCTCAAATTCTTCGACAAGGTG
GAGGTGGCGAATTTCGAAATCGCTTCGGACGCGTTCAGCACGTTCAAGGACCTGTTGACG
CGGCACAAGGCGGTGGTGGCTCAGTACCTGCAGGAGCACTACACGGAGTTCTTCGGGGCG
TACATCCGGTTACTGCAGTCCACCAACTACGTCGTGCGGCGGCAGTCGCTTAAGCTGTTG
GGCGAGCTGCTTCTGGACCGCACCAACGTCAAGGTGATGCTCAAGTTCGTGAGCGACGTG
CAGCACCTGATGACCATGATGGTGCTACTCAAGGACCAGAGCCGATCCATCCAGTTCGAG
GCCTTCCACGTGTTCAAGGTGTTTGTGGCCAACCCCAACAAGCCCCAGCCCATTGTGGAC
ATCCTGGCCAACAACCGCGAGAAGCTGCTCAAGTACCTGGAGGACTTCCACACCGAGAAG
GAGGAGGACGAGCAGTTCAAGGAGGAGAAGGCGGTCATCATCAAAACAATATCCATGCTC
GGCAACccggcgcccgcgccggcgccagcacccgccgcggccgccccgccggcagcagca
ccggcgccagccccggcgcccgcgccagcagcacccgcgtcctcgccaccgcAGGGGTCA
TAGACGCTTGGTCAGTGTCCAGGAGGCATGCGCTGTCATACAGGACGCTTGGCGGCGCAG
GCATAGCCGTTCATGCAGCGTATGCATAGGGCGTGGTGTATCTTAGCATTGAGATTGAAA
GCCGTGCTGCAGGCTGGTCTTGAAGTGCGGCGCGAATGGGCTTGTTTGCTAGCGTGGCGC
ATTGCGCAAGGCCCTGCATTGATTGTGGCCTGGCACGGCGGCGACGCGGCGGCACGTAAG
CGGCAGCAGCCGCCTGACGCGCTCTGTCTGGTCGCTGATGCTGTGGCGGCGGGTGGAGTG
TGGGGCGTCAGCCTGTCCTACTGCTGGGTGCCCATCAGCATTAGGAGTGCTATACGCTGG
CCGGTGGGTGAGCATGTAGCGAGAGGTCTCGAACCACGGCCGGGGGTCGTCACCGAGGAT
AGAGGCGGGTTCAGGCTTGGGCTTCAGGTGGGAGCACAATGTGTGCGAGTGGTGCGCCGG
CTCCGCTTTCTGTTTTGCGGATCAGACAGCGGAAAACGGTCGCTTGAGGGTGTAAGGCCT
GTCAAGTATCGTTGATATGGCAGGCGCGGGGCGTTGAGCTCGCCGACTCAGGCGTTGCTG
AAGCAAGTTGTCCGAGTGTTGGGCACTCGACGAAGAGGTTAGATGACTAGAGCGTGCGGT
GGAAATGCCCAAGCGGAAGAGCTGAGCCGACAGGGGCTTTGGTGATACTGCTGTGGAGTC
AAGGCAGTGCGAGGGCAGCACGATTGCGGCAGTCGGTGTGATGAGAGGTGGCGTGGGGGT
TTCCACGAATCGTGCTTCAGTCACGAGAGAGAAGCGCGTGCCTGCACTCGATGCCCTCGA
AAGACGCAGTAGGAAATGGACGCAGGGCGCCGGAGGTGTTGCAGAGGCTGGGGTGCTGCA
CCGGCTGTAACTCGACTGCGTT