Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre17.g705450.t1.2
CDS Infomation

pacid=30782083 polypeptide=Cre17.g705450.t1.2 locus=Cre17.g705450 ID=Cre17.g705450.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGACGCTGATGACCCGCAGCAGCGGCTGCTTCGTGCAGCGGCCGAGCGGGAGGAGGCG
GAGGGCCGCGCCGTTGGCGATGGGGGCGTTGAAATCGTCGGGCTAGGCCTCCGCTTGCGT
CAGCCCAAGCGCGTCCTAGTTGCCGGCGCGATCATTCTGGGCGTCTTTCTCGCGCTCACC
ACGTCCTGGGCATGGGCAGCGTCGGGCGCAACCTCAGCGGGCTCAAGCGCGCCGGGCTTG
GGCATTGCGGCGTCGGATGCACAGCGCGTACTGCAGCTCAACTACGTGAGCTTCCATCCG
TTCAACCTCATTTACCGGTTATCTGCCCAGACCCTCTTTGGGCTCCCAGGAGAGACCGCC
AGCCGCATCCCCATGCTGTTCTCGAACTACCAGCTGGAGGTGGTCCTGCGCACCATGGAC
CGCCATGGCACCGCTGCCAGCGGCAGCCACACCACACCAGCGGCCGGCATCCCCGACACC
AGCAACCAGCCCGGCGCCGCCGCCGGCGAGAAGGTCGCATGCACCACCGCAAGCCCTACA
CAACCACAGGGCGCTCTGCGGCAGGCCAGCACCCATGCCGTGGACGTGGCGGGATACCTG
GCCTCGCAGCCCGCCTCCGCTGCCCTGTACGCCGCAGGGCTGCTCACGGCGCCTCGCGCC
GCGCTGCTGGTAGCGTGGCTGTGGGATGCCGACCCAGATGGCGGTGCCGTCGGCGCGCTC
ATGGCGATGCGCAATACACGGGTAGACATTGCGGGCGCCGCCAACAAGCTAACGTTTGGC
TGGATGCGCACCCTGGGCCTGTACATGTGGCGGGACGAGGCGTCCAAAGGGCCGCAGGCG
CCTCCGAGCGGCCTAAGCGGGCTGTGCTTCTGGGCCCTGGCGTTACTGTGCCCCAGCGCC
CTCACCTGCTACTTCGCCATGAGCCTGGCGGCCACCGCGCCCTTGACCGCCGCTTGGGCC
GTGCTGTCAAGCCTCACCCGCGGCGCTTGTGAGCTGCGTGTGGCGGCGCACCTGATTGCG
CTGGTGTGGCGGCGGCAGCCGCAGGCGGCGCTGCAGTGCGTGGCGTGCAGTCACGGCGTG
CCGGCCGTACTGGGCTGCCATGTGCTGGGCGGGCTGTGGCTGGCGGCGGGGCTGCTGCCA
GGCCGCGTGCTGCTGGGCATGGCGGTGTACATGTACGGGCTGTGGGCGCCGTTCGCGGCG
GCGGCAATGATGCTCATGGCGCTGCAGCCCAACCAGGGCGGGATGCTGGATATTGGCGGC
CTGCACCATCACCACCGGCAGGGCGCCGGCGGCTTTGCCGGCGAGGATGCCGACGGCGCT
AACGACGGTGGTGTGCGGCCCCATGTCCCGGGCACTGGCGTGACGGCTTGCGTGGTGGTG
CGCCGCCGGCAGCACTGGCCGCCGCCGGTGGAGGTGCCGGCGGCGTTGCAGGAGGAGGCA
GAGCACGCGCCGCGGCACCTGCTGTGCCCAATCACACACCTCATCCTGACCGAGCCCGCC
GTCACCGTCACGGGCGCTACGTACGAGCGCTCCGCCATCATTGGTTGGCTGCAGCAGGCC
AGAAAGGACCCGCTGACGGGCCACGAGGTGTCGCCGGAGGAGGTGTTCCCGAACCTGGCC
ATGTACGCCGTTCTGGAGGAGTACGTGCGGGAGCAGGCGCCCAAGCTGCAGCAGCGGGCA
GCGGCAGCGGAGGCCGAGGGTGAGGGTGTGGCGGCGTGA

Peptide Sequence

PEP ID

Cre17.g705450.t1.2
PEP Infomation

pacid=30782083 transcript=Cre17.g705450.t1.2 locus=Cre17.g705450 ID=Cre17.g705450.t1.2.v5.5 annot-version=v5.6
Sequence

MDADDPQQRLLRAAAEREEAEGRAVGDGGVEIVGLGLRLRQPKRVLVAGAIILGVFLALT
TSWAWAASGATSAGSSAPGLGIAASDAQRVLQLNYVSFHPFNLIYRLSAQTLFGLPGETA
SRIPMLFSNYQLEVVLRTMDRHGTAASGSHTTPAAGIPDTSNQPGAAAGEKVACTTASPT
QPQGALRQASTHAVDVAGYLASQPASAALYAAGLLTAPRAALLVAWLWDADPDGGAVGAL
MAMRNTRVDIAGAANKLTFGWMRTLGLYMWRDEASKGPQAPPSGLSGLCFWALALLCPSA
LTCYFAMSLAATAPLTAAWAVLSSLTRGACELRVAAHLIALVWRRQPQAALQCVACSHGV
PAVLGCHVLGGLWLAAGLLPGRVLLGMAVYMYGLWAPFAAAAMMLMALQPNQGGMLDIGG
LHHHHRQGAGGFAGEDADGANDGGVRPHVPGTGVTACVVVRRRQHWPPPVEVPAALQEEA
EHAPRHLLCPITHLILTEPAVTVTGATYERSAIIGWLQQARKDPLTGHEVSPEEVFPNLA
MYAVLEEYVREQAPKLQQRAAAAEAEGEGVAA*

Transcript Sequence

Transcript ID

Cre17.g705450.t1.2
Transcript Infomation

pacid=30782083 locus=Cre17.g705450 annot-version=v5.6
Sequence

CATAACATCATGGAAAAGCCCTGAGCTCGGGATTAAGAAACACGCCCCTCCACCTCAGCA
AACCGCCCTCGTATCCATGCGGGCGGAATTCGAGACTCGAAACTTTGCTTGCGTTCCCTG
CTTGATTTCAACACTTGTTTTAAAATCTGAGCTATAGAATCAATTCTGCATACTCGTGAT
CCATTGCTAGTGTCCAAATCTATTATATCGAAGCGAGCCCAGGCGCCAGCTCAAACCGCG
AAACTTGCAAGCCTGTGGGTTTGCCACAGACCCTGTACGTATATTGTTGCATACTATGGA
CGCTGATGACCCGCAGCAGCGGCTGCTTCGTGCAGCGGCCGAGCGGGAGGAGGCGGAGGG
CCGCGCCGTTGGCGATGGGGGCGTTGAAATCGTCGGGCTAGGCCTCCGCTTGCGTCAGCC
CAAGCGCGTCCTAGTTGCCGGCGCGATCATTCTGGGCGTCTTTCTCGCGCTCACCACGTC
CTGGGCATGGGCAGCGTCGGGCGCAACCTCAGCGGGCTCAAGCGCGCCGGGCTTGGGCAT
TGCGGCGTCGGATGCACAGCGCGTACTGCAGCTCAACTACGTGAGCTTCCATCCGTTCAA
CCTCATTTACCGGTTATCTGCCCAGACCCTCTTTGGGCTCCCAGGAGAGACCGCCAGCCG
CATCCCCATGCTGTTCTCGAACTACCAGCTGGAGGTGGTCCTGCGCACCATGGACCGCCA
TGGCACCGCTGCCAGCGGCAGCCACACCACACCAGCGGCCGGCATCCCCGACACCAGCAA
CCAGCCCGGCGCCGCCGCCGGCGAGAAGGTCGCATGCACCACCGCAAGCCCTACACAACC
ACAGGGCGCTCTGCGGCAGGCCAGCACCCATGCCGTGGACGTGGCGGGATACCTGGCCTC
GCAGCCCGCCTCCGCTGCCCTGTACGCCGCAGGGCTGCTCACGGCGCCTCGCGCCGCGCT
GCTGGTAGCGTGGCTGTGGGATGCCGACCCAGATGGCGGTGCCGTCGGCGCGCTCATGGC
GATGCGCAATACACGGGTAGACATTGCGGGCGCCGCCAACAAGCTAACGTTTGGCTGGAT
GCGCACCCTGGGCCTGTACATGTGGCGGGACGAGGCGTCCAAAGGGCCGCAGGCGCCTCC
GAGCGGCCTAAGCGGGCTGTGCTTCTGGGCCCTGGCGTTACTGTGCCCCAGCGCCCTCAC
CTGCTACTTCGCCATGAGCCTGGCGGCCACCGCGCCCTTGACCGCCGCTTGGGCCGTGCT
GTCAAGCCTCACCCGCGGCGCTTGTGAGCTGCGTGTGGCGGCGCACCTGATTGCGCTGGT
GTGGCGGCGGCAGCCGCAGGCGGCGCTGCAGTGCGTGGCGTGCAGTCACGGCGTGCCGGC
CGTACTGGGCTGCCATGTGCTGGGCGGGCTGTGGCTGGCGGCGGGGCTGCTGCCAGGCCG
CGTGCTGCTGGGCATGGCGGTGTACATGTACGGGCTGTGGGCGCCGTTCGCGGCGGCGGC
AATGATGCTCATGGCGCTGCAGCCCAACCAGGGCGGGATGCTGGATATTGGCGGCCTGCA
CCATCACCACCGGCAGGGCGCCGGCGGCTTTGCCGGCGAGGATGCCGACGGCGCTAACGA
CGGTGGTGTGCGGCCCCATGTCCCGGGCACTGGCGTGACGGCTTGCGTGGTGGTGCGCCG
CCGGCAGCACTGGCCGCCGCCGGTGGAGGTGCCGGCGGCGTTGCAGGAGGAGGCAGAGCA
CGCGCCGCGGCACCTGCTGTGCCCAATCACACACCTCATCCTGACCGAGCCCGCCGTCAC
CGTCACGGGCGCTACGTACGAGCGCTCCGCCATCATTGGTTGGCTGCAGCAGGCCAGAAA
GGACCCGCTGACGGGCCACGAGGTGTCGCCGGAGGAGGTGTTCCCGAACCTGGCCATGTA
CGCCGTTCTGGAGGAGTACGTGCGGGAGCAGGCGCCCAAGCTGCAGCAGCGGGCAGCGGC
AGCGGAGGCCGAGGGTGAGGGTGTGGCGGCGTGAGGTGGAGGCAGGTTTTGCGTGACGTG
TGAGCGGCTGCGACTTCATACAACAGCATTGTGGTGGCAAGTGGCAACCGCGCCCGCCAA
TTTTGGGTCGGTCGTATTTGGTTGCTTAGTGAGTGGGACGCAGCTCTGTACATTATTGGT
CTTGCGATGAAGACGCAATTTAGCAGCATCATGGGGACAAGCGGCAAGGCCACACATGCC
AGCGGTTGACACGCCCGTACATGCGACAGTACCCAGGGTTGGAAGGCAGAGTCAAGCGTG
GTTGTCGTGCCGCTTGTAGTCAGGAAGCCAAGAACTGATACGCGCTGGTGATTGCGCTTA
CTGAAGCGGAGGCTCAGGCAGGCTCATGGGCTCTTAAAGCCGGGCTGCAGTGTGCAGTCG
GTCGTCCCTCTTGCCTAAGTCAATCCATTTGTTGTGCGGGTGACATAAAGTCCATGCTAT
GACTGGCAATGGCTGTAAGAATGCCACCAT