Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre17.g699400.t1.2
CDS Infomation

pacid=30782454 polypeptide=Cre17.g699400.t1.2 locus=Cre17.g699400 ID=Cre17.g699400.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCCAGCGAGGATGCGCTGCAGCACACCGCGTCGCTGCTGCTGCTCTCGCTGAGCCGC
GCGGCCGTGTCGGAGGGCGTGCACGCCGGCGAAACCCTGGACCGCGGCACGGTGCTCATC
ACCTGGACCCCCCGGGGGCTGGAGCTGTGCAAGCAGCTGCCGTACAAACATCGCTGCGTG
CTGGACACTGAGCACCGCACGTCCGGCAGCATGGGTTTCCACGGGCAGGGCTTCAACGCG
CTTGGGTTCGCCAAGGCCAAGTACATTCTCAACACGCTGGCGGTGGGGAACGATGTGCTG
TTCCTGGATGCAGACACACTCGTGTTGCGGGACCCACTGCCCTACCTGATAAGCCGCGGT
GCCGACATGTCCACCTCACTGGACCGCTGTCTGGTGTTCAACGACACGCTCGCGTACCGC
CGCCACCGGCCCACGCTCAGGAGCAGCAGCAGCAGCCACAGGCGCCTCAGCAGCCGCAGC
GCCCGCAGCAGTAGCAGCCACCACCATCACCACAGCAGCATCAGTGGCAGCAGCGCCAGC
AGCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCCAGTCAATCCAAGTCCCAG
AACAAAGAGCCCCAATCTGCAACGAGCAATCCAACCGCCTCAGGCTCCGAATCTGCCACC
AGCACCCACAGCCCCCAGCCCGAGCCTGAGCCCGACTACCTGTCTTGGCGCTGGCCGCTG
CCGCCCTCCAACATCGGCATGCTGTACTTCCGCGCCAACGCGGCGGTGACGCGCTGCGTG
TACTCTTGGATGACCGACATGCGCTTCGAGGCGGACATCAATCCCAAGATGTGGGATCAG
GACATGTACGGGCGTGTGATGTCCAAGTGCGCCGCACTGCTGGGGCTGAGGTGGCAGGCG
CTGGACCCGCGGCTGTTCCAGAGCGCGTGCTTCAAGGAGTGCGGGTGCGCGCACGAGGAC
GCGGACGTGGGGGAGCCGGGCCGTGTGGGCCGGGACGGCGGCCACCTCCCCTACATGGCG
CGGGGGGACGCGGTGGAGGCGGTGGAGGCGGTGGAGGCGGCTGGCCGTGCTGGTGGTGGT
GGTGGGGCTGGTGGGGCTGGTGGGGCTGGTGAGGGCATTGGTAGTGATCGTGACGAGGTC
CGGGCTGCAGGCGTGGCTTCAAGGCGCGACACGGTGGATGGGGACGACCGCCACCGACGT
ACGACGCGAGGGTCGTTGAAGGATGGGGTGGAGGGCGAAGTGGACGGGCAGGCAGGGGGT
GAGGACGCGGGCACCGATAAAACGGCGGAGGGCCAGCGAGAGGGAGGGCAGCGGCCGCAG
CAACAGGAGGAGCAGGAGGAGGATCAAGCTCCGGAACAGTGGGAGTTTGACTACATGTGT
GACCCGGCCTTGTTTGAGGGGTGGGTGGCACGGCATTTCCCCTGCTCCGGCCTGGCACCC
GTCAAGGCGCAGCTCATGGCAAACCTGCTGCGGGGGCTGCGGCAGCACACGCCGGTGCGG
ATACGATACCGGCCTTGA

Peptide Sequence

PEP ID

Cre17.g699400.t1.2
PEP Infomation

pacid=30782454 transcript=Cre17.g699400.t1.2 locus=Cre17.g699400 ID=Cre17.g699400.t1.2.v5.5 annot-version=v5.6
Sequence

MASEDALQHTASLLLLSLSRAAVSEGVHAGETLDRGTVLITWTPRGLELCKQLPYKHRCV
LDTEHRTSGSMGFHGQGFNALGFAKAKYILNTLAVGNDVLFLDADTLVLRDPLPYLISRG
ADMSTSLDRCLVFNDTLAYRRHRPTLRSSSSSHRRLSSRSARSSSSHHHHHSSISGSSAS
SNSGSSSSSSSSSASQSKSQNKEPQSATSNPTASGSESATSTHSPQPEPEPDYLSWRWPL
PPSNIGMLYFRANAAVTRCVYSWMTDMRFEADINPKMWDQDMYGRVMSKCAALLGLRWQA
LDPRLFQSACFKECGCAHEDADVGEPGRVGRDGGHLPYMARGDAVEAVEAVEAAGRAGGG
GGAGGAGGAGEGIGSDRDEVRAAGVASRRDTVDGDDRHRRTTRGSLKDGVEGEVDGQAGG
EDAGTDKTAEGQREGGQRPQQQEEQEEDQAPEQWEFDYMCDPALFEGWVARHFPCSGLAP
VKAQLMANLLRGLRQHTPVRIRYRP*

Transcript Sequence

Transcript ID

Cre17.g699400.t1.2
Transcript Infomation

pacid=30782454 locus=Cre17.g699400 annot-version=v5.6
Sequence

GCTAGCCGACCTAGCCGATAGCCACTTCGACACTCACGGCGCTAGACTCCCGACAAGGGA
ATTTGTACAGGCAGTCAAGGCAGCGGCGTTCAGCAGCGAGCACCAGTCGCGATGCCGCGG
TCGTCGCGCGGTTACAATTCTGGCGATGGCCAGCGAGGATGCGCTGCAGCACACCGCGTC
GCTGCTGCTGCTCTCGCTGAGCCGCGCGGCCGTGTCGGAGGGCGTGCACGCCGGCGAAAC
CCTGGACCGCGGCACGGTGCTCATCACCTGGACCCCCCGGGGGCTGGAGCTGTGCAAGCA
GCTGCCGTACAAACATCGCTGCGTGCTGGACACTGAGCACCGCACGTCCGGCAGCATGGG
TTTCCACGGGCAGGGCTTCAACGCGCTTGGGTTCGCCAAGGCCAAGTACATTCTCAACAC
GCTGGCGGTGGGGAACGATGTGCTGTTCCTGGATGCAGACACACTCGTGTTGCGGGACCC
ACTGCCCTACCTGATAAGCCGCGGTGCCGACATGTCCACCTCACTGGACCGCTGTCTGGT
GTTCAACGACACGCTCGCGTACCGCCGCCACCGGCCCACGCTCAGGAGCAGCAGCAGCAG
CCACAGGCgcctcagcagccgcagcgcccgcagcagtagcagccaccaccatcaccacag
cagcatcagtggcagcagcgccagcagcaacagcggcagcagcagcagcagcagcagcag
caGCGCCAGTCAATCCAAGTCCCAGAACAAAGAGCCCCAATCTGCAACGAGCAATCCAAC
CGCCTCAGGCTCCGAATCTGCCACCAGCACCCACAGCCCCCAGCCCGAGCCTGAGCCCGA
CTACCTGTCTTGGCGCTGGCCGCTGCCGCCCTCCAACATCGGCATGCTGTACTTCCGCGC
CAACGCGGCGGTGACGCGCTGCGTGTACTCTTGGATGACCGACATGCGCTTCGAGGCGGA
CATCAATCCCAAGATGTGGGATCAGGACATGTACGGGCGTGTGATGTCCAAGTGCGCCGC
ACTGCTGGGGCTGAGGTGGCAGGCGCTGGACCCGCGGCTGTTCCAGAGCGCGTGCTTCAA
GGAGTGCGGGTGCGCGCACGAGGACGCGGACGTGGGGGAGCCGGGCCGTGTGGGCCGGGA
CGGCGGCCACCTCCCCTACATGGCGCGGGGGGACGCggtggaggcggtggaggcggtgga
ggcggctggccgtgctggtggtggtggtggggctggtggggctggtggggctggtgAGGG
CATTGGTAGTGATCGTGACGAGGTCCGGGCTGCAGGCGTGGCTTCAAGGCGCGACACGGT
GGATGGGGACGACCGCCACCGACGTACGACGCGAGGGTCGTTGAAGGATGGGGTGGAGGG
CGAAGTGGACGGGCAGGCAGGGGGTGAGGACGCGGGCACCGATAAAACGGCGGAGGGCCA
GCGAGAGGGAGGGCAGCGGCCGCAGCAACAGGAGGAGCAGGAGGAGGATCAAGCTCCGGA
ACAGTGGGAGTTTGACTACATGTGTGACCCGGCCTTGTTTGAGGGGTGGGTGGCACGGCA
TTTCCCCTGCTCCGGCCTGGCACCCGTCAAGGCGCAGCTCATGGCAAACCTGCTGCGGGG
GCTGCGGCAGCACACGCCGGTGCGGATACGATACCGGCCTTGAGGCTTGAGCTGCGTGAC
AGCTTGACATGTGCAGCTGTAGCAGGTATGCGGCTAGAGTGAAGTACTGCCCTGAGTTGT
ATGTGCCTGGTATGCGTTGCTGGAACAATGTTGACAGTAGATGACATGCTGCGGTTTCTA
TGACGAGTCCCAAGGATAACATGAGCTAGTGATCACACGCGAATGGATTTACACGCCCAC
GTGCGCATGGCGAGCGTATGTCAAGTATCTAAGTGGTTCCTATGATGCGTGCACAAGAAT
GAGGATACCAACTCAAGTAGTACCGTACCGCCGTATGAGGTGTGTATGATGCATTACTGT
GTTAGCTAGCTGTGTGTTAAGAAGCAGAAGGGGGAAAGGTCGACACGGTGTTGGCTGTAA
ACGTGTGCGTGGGCCTGTGGATGGCGTGCAGTGCAGCAGCCGTGTGGGGCAGGGAGGATG
AGGCAGGTGGTCCAACAGCAGGTCACAGGCGCCAAGCAAGAAGCGTTGTCCACATGGTCA
AGAAATGGGGTGGCGCAGAGCAGTTTTGTGGGCGCAGGGAGGAGGGCGCGCTGAGTATGG
TGTACATGAGCGCAGAATCGTATATGTGTGGGGTAGAGGGGTAGTCGTGGTGTAGCCGTG
CTGCCAATGCATTTGGCGTGGCGAGGCGCTCTCCCAGAATGTGTTACAATCTGTAGCCAT
ATATATCG