Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre16.g683350.t1.2
CDS Infomation

pacid=30777206 polypeptide=Cre16.g683350.t1.2 locus=Cre16.g683350 ID=Cre16.g683350.t1.2.v5.5 annot-version=v5.6
Sequence

ATGATGGCCACGATACGCCTTGAGGAGCCATTAGAACTCAAAGTCGCAAGTCTAGCCGAG
GTGAAGAATGTCGCGCCGTTCTCCTATGAGGTTGGCGAGCACCGGCACCGGAGCCTAGGG
CTCCGCGGACTGCAAATCAAATTCAAGCCACGCCCAGACGACTCCACAGACGCCGACGCC
GACGCCCCGGGGCCCCTCGACTGGGCCATGCGGGCGCGGGTGGCGGGTTGGTTCGCCAAT
GCACGGCCAGGCAACAGCGCTGCGTCTGCCGCCCCGGCATCCGGGGGGCCGCCGGCGGGC
CCGGGCGTCAACACCAGCACCAGCACCAGCCAAGTCGCAGCTCCATTAGAACCACCTACC
GGGCCTGGGACTTCTGCGGCAGCAGGCCCTGGCACCCGCGCTGCCAGTGCTGCGAGTAAT
GCCGCTGGACCAGGGACCTCCGCATCAGCAGCAGCCGGCGCCAGCACTGGCGACAGCTCT
GGCGCCAGCACTGGCGCCAGCACCACCGGGCCTCGCGCGGCGCCGCCGGCCTCGCGCGCG
CCCTCTGACAGCTGGCTGGAGATGCTGTTCCCGTTCTCCTCCAACGCGGTGCTGCGGGAG
CAGTACCAGCGCTTCATGAGCAACAGCATGCGGTACGGGCTGCTGCTTGAGGACCTGGAC
ACACTGGCGGGTGACATCGCGGCCCGGCACGCGGGCGTTCGCGACCGGGTGCTGCTCACC
GCCTCCATAGACCGCATCTCGTGGCTGCAGGACCCGGACGTTGGTGAGATGACGCTATCG
CACGACCTCCGCATGGCGGGACAGGTGGTGTGGGCGGGCCGCAGCAGCATGGAGGTGCTT
ATCGAGCTGTCCCGCCGCGAGTCCAGCCAGCAGGCCTGGACGTTCCTTGGCCTGGCGCGC
TTCGTGCTGGTGGCGCGGACGCCCGACCGCACCGCCGCCGCCGACGTCCCTGTGCTGCTG
CCGCAGACCCCCCGCGAGCGGGAGCTGTTCGAGCAAGGGCAGAAGCACATGCAGCTGCGG
AACCAGCGGCGCGACACGCACACGGCTCGCAAGCCGCCCACAGTGGAGGAGGTGGCGCTG
GTGCACGACCTCATCCGCAACCACCACCTGGCACGAACCCTGGCGTCGCACCACCATCAC
CACTCCCCCTCTGCCGACGCGGTGCCCATGGCGCGCACTGGGCTGCAGAGCAGTGTGCTG
ATGCATAGCCAGGACCGCAACGCCTTCGACGTCATCTTTGGCGGCCACCTGCTGCGGCTG
GCCTACGAGCACGCCTTCGCCACCGCGGCGCTGCACGCGGGCGAGTACTGCGACCCCCTG
TCCATGGACGACGTGGCGTTCCTGCTGCCCGTGCCCATTGGCACCTTGCTGCGGCTGACC
GGCCAGGTGGTGTATGTGGAGGGGCCGGTGGTGCGGGTGCACGTGCGCGCCACCAAGCTG
GAGCCGGGCGCGCCGGAGCAGAGCGTCGTCACCAACGTGTTCAGTTTTGCGTTCGTGAGC
AAGAGCGGGGGCGTGCGGCGGGTGGTGCCTGAGACCATGGTGGAGGCAATGGAGTACCTG
ATGGGCTACCGGCAGCACGTGATGGACGAGACCAGCAGGATGGTGGCAGAGGACCGTGTC
AGGCCCAAGTTGTGA

Peptide Sequence

PEP ID

Cre16.g683350.t1.2
PEP Infomation

pacid=30777206 transcript=Cre16.g683350.t1.2 locus=Cre16.g683350 ID=Cre16.g683350.t1.2.v5.5 annot-version=v5.6
Sequence

MMATIRLEEPLELKVASLAEVKNVAPFSYEVGEHRHRSLGLRGLQIKFKPRPDDSTDADA
DAPGPLDWAMRARVAGWFANARPGNSAASAAPASGGPPAGPGVNTSTSTSQVAAPLEPPT
GPGTSAAAGPGTRAASAASNAAGPGTSASAAAGASTGDSSGASTGASTTGPRAAPPASRA
PSDSWLEMLFPFSSNAVLREQYQRFMSNSMRYGLLLEDLDTLAGDIAARHAGVRDRVLLT
ASIDRISWLQDPDVGEMTLSHDLRMAGQVVWAGRSSMEVLIELSRRESSQQAWTFLGLAR
FVLVARTPDRTAAADVPVLLPQTPRERELFEQGQKHMQLRNQRRDTHTARKPPTVEEVAL
VHDLIRNHHLARTLASHHHHHSPSADAVPMARTGLQSSVLMHSQDRNAFDVIFGGHLLRL
AYEHAFATAALHAGEYCDPLSMDDVAFLLPVPIGTLLRLTGQVVYVEGPVVRVHVRATKL
EPGAPEQSVVTNVFSFAFVSKSGGVRRVVPETMVEAMEYLMGYRQHVMDETSRMVAEDRV
RPKL*

Transcript Sequence

Transcript ID

Cre16.g683350.t1.2
Transcript Infomation

pacid=30777206 locus=Cre16.g683350 annot-version=v5.6
Sequence

GGAAGCGCCCCCATCGGGCCCCCGCGTGGACTCTTGCCGGGCTATGTAGTATAGAGCAGT
GGTTTGGTAGTTGATCGACCGATTCCGCAAGCCGCGGCTAACCGTTTTGCGGTAACCGTG
CAACCGTTTGCGACGCTCGTTACGCGTGCTGCTCAGCGTGCTGCCTCCAGCATCGCCAAC
TCTAAATGTATACTTTGAATGCGTGCCCGTCTCTCGTTGGGGGTACCCTCGGGCATAAAT
TAGGGAACTTGCGGGGGGGGAGGGGTAAACCCGCCGTGTCAACCCGAACCCGTAATTCAA
CCAGTCTGCGCCAGGCCATTGCCCAGATTGATGTCCATCCAACACCTCGCTACTGCAGTA
GTGGCCTCCTTGCAATGTTAGCTAGGCTTCTGCTCTGTATAAAAAGCACTGCACATTGCC
GGGCGACTCAACTTTGCAGGATGATGGCCACGATACGCCTTGAGGAGCCATTAGAACTCA
AAGTCGCAAGTCTAGCCGAGGTGAAGAATGTCGCGCCGTTCTCCTATGAGGTTGGCGAGC
ACCGGCACCGGAGCCTAGGGCTCCGCGGACTGCAAATCAAATTCAAGCCACGCCCAGACG
ACTCCACAGACGCCGACGCCGACGCCCCGGGGCCCCTCGACTGGGCCATGCGGGCGCGGG
TGGCGGGTTGGTTCGCCAATGCACGGCCAGGCAACAGCGCTGCGTCTGCCGCCCCGGCAT
ccggggggccgccggcgggcccgggcgTCAACACCAGCACCAGCACCAGCCAAGTCGCAG
CTCCATTAGAACCACCTACCGGGCCTGGGACTTCTGCGGCAGCAGGCCCTGGCACCCGCG
CTGCCAGTGCTGCGAGTAATGCCGCTGGACCAGGGACCTCCGCATCAGCAGCAGCCGGCG
CCAGCACTGGCGACAGCTCTGGCGCCAGCACTGGCGCCAGCACCAccgggcctcgcgcgg
cgccgccggcctcgcgcgcgcccTCTGACAGCTGGCTGGAGATGCTGTTCCCGTTCTCCT
CCAACGCGGTGCTGCGGGAGCAGTACCAGCGCTTCATGAGCAACAGCATGCGGTACGGGC
TGCTGCTTGAGGACCTGGACACACTGGCGGGTGACATCGCGGCCCGGCACGCGGGCGTTC
GCGACCGGGTGCTGCTCACCGCCTCCATAGACCGCATCTCGTGGCTGCAGGACCCGGACG
TTGGTGAGATGACGCTATCGCACGACCTCCGCATGGCGGGACAGGTGGTGTGGGCGGGCC
GCAGCAGCATGGAGGTGCTTATCGAGCTGTCCCGCCGCGAGTCCAGCCAGCAGGCCTGGA
CGTTCCTTGGCCTGGCGCGCTTCGTGCTGGTGGCGCGGACGCCCGACCGCACCGCCGCCG
CCGACGTCCCTGTGCTGCTGCCGCAGACCCCCCGCGAGCGGGAGCTGTTCGAGCAAGGGC
AGAAGCACATGCAGCTGCGGAACCAGCGGCGCGACACGCACACGGCTCGCAAGCCGCCCA
CAGTGGAGGAGGTGGCGCTGGTGCACGACCTCATCCGCAACCACCACCTGGCACGAACCC
TGGCGTCGCACCACCATCACCACTCCCCCTCTGCCGACGCGGTGCCCATGGCGCGCACTG
GGCTGCAGAGCAGTGTGCTGATGCATAGCCAGGACCGCAACGCCTTCGACGTCATCTTTG
GCGGCCACCTGCTGCGGCTGGCCTACGAGCACGCCTTCGCCACCGCGGCGCTGCACGCGG
GCGAGTACTGCGACCCCCTGTCCATGGACGACGTGGCGTTCCTGCTGCCCGTGCCCATTG
GCACCTTGCTGCGGCTGACCGGCCAGGTGGTGTATGTGGAGGGGCCGGTGGTGCGGGTGC
ACGTGCGCGCCACCAAGCTGGAGCCGGGCGCGCCGGAGCAGAGCGTCGTCACCAACGTGT
TCAGTTTTGCGTTCGTGAGCAAGAGCGGGGGCGTGCGGCGGGTGGTGCCTGAGACCATGG
TGGAGGCAATGGAGTACCTGATGGGCTACCGGCAGCACGTGATGGACGAGACCAGCAGGA
TGGTGGCAGAGGACCGTGTCAGGCCCAAGTTGTGATCGTGAGCAGTGATGGGGACGGCCT
CGCATCAGTGTTGTTCCGTGCAGCGGCGTGCAGCTGTGATGATGCTGTGGCCGCGACAAG
GCGTGATCAGGCGTGATTAAGATAGATTACGTGATGACGGGGTGTGGCATTGACTGGCAA
GGCGTACATACCGTACTGCCAGGAAGTATTTTTCATAATTCGTTTTTTGGCGTTGAAAAA
AACTTAATTTGGAAAAAGTTAATGATAATTCGCGTTCCAAATGAAAAAAACTTAATAGCT
GCGGGAAAACTGGGGGTTGCGCGGGGAAGGGCAGCGGGGTGGGGCACATGCGTGTGTGTT
CCGATGGTCACACACGCAGAGCCACACGTTTCTGGATGCACCCGATCATAGTGCGCATTG
GACGGAAATGGGTCGGCTGCTGGGCCAGATAGGTCGGAGAGCTTGGAATGGAGCAGTGGG
AGCCGTTTCCCTATGGCGTACCGTACCGTATGCTGTCTGGTGGGGCTGCGCCGGCGTGCG
GTAGGGCTGCGCCGGCGTGTGGCAGAGCACGCCGGCGCGGCCTCAGCATGTGCCGAAAAA
TTCCAGACTTAAATCCC