Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre16.g679950.t1.2
CDS Infomation

pacid=30777561 polypeptide=Cre16.g679950.t1.2 locus=Cre16.g679950 ID=Cre16.g679950.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCCCCTATGGGTGGACAAGTATCGCCCGAACTCGTTTGACAAGTTCGTCGTGCACAAG
GATATCGCGGACAACCTCAAAAAGCTGGTGGCGACGGGGGACTTTCCACACACGTTATTC
TATGGGCCCCCGGGAGCTGGCAAGAAGACGCTGGTGATGGCGCTTCTAAGAGCCATCTAC
GGCGCAGGCGTGGAGAAGGTCCGCGTGGAGACGAAACCATGGAAGATTGATCTGCCCAGC
CGCAAGCTGGAGGTGGAGCTGACCACGCTGTCGTCAAACCACCATTTGGAGCTCAACCCC
GCGGATGTGGGCAGCAACGACCGATACGTGGTGCAGGAGATCATCAAGGAGATGGCGCGC
AGTCGGCCGATGGGCGCGGACGGCAGCCGCGGGTTCAAGGTCCTGGTGCTGAACGAGGTG
GACCGGCTGTCCAAGGAGGCGCAGCAGGGCCTGCGCCGCACCATGGAGAAGTACAGCAGC
GCCTGCAGGCTGATCATGGTGTGCAGCAACGTGTCCAAGGTGATGGAGCCAGTGCGCTCC
CGCTGCCTGTGCGTGCGCGTGGCGGCACCCAGCGACGCGCAGGTGATGGAGGTGCTCCAG
GGCGTGGCCAAGAAGGAGAACCTGGTGCTGCCGGAGGCCTTTGCGGCGCGGGTGGTGGAC
TACGCCGGCCGCAACCTGCGCAGGGCGCTGCTGTGCCTGGAGGTGTGCCGCGCGCAGCAG
TACCCCTTCGGCGACAGCCAAGAGCCGCAGCGGGCGGACTGGGAGCTGTACATTGCCGAG
GTGGCCAAAAACATTATGGATGAGCAGAGCCCCAAGCAGCTCTACCTAGTCCGCAGCAAG
CTGTACGAGCTGCTGGCCAACTGCGTGCCGCCCGAGCTCATCATGCGCCAGCTCACCTTC
GAGCTGCTTAAACGAATGGACGACGAAATCAAGCTGGAGACGGTGTCATATGCGGCCCAG
TTTGAGCAGCGGCTGCAGGAGGGCGCCAAGGCCATCTTCCACCTGGAGGCCTTCGTGGCG
CGGGTCATGAGCAACGTCAAGACGTACCTGGTCTCGTGCGGCCTGGCCTAG

Peptide Sequence

PEP ID

Cre16.g679950.t1.2
PEP Infomation

pacid=30777561 transcript=Cre16.g679950.t1.2 locus=Cre16.g679950 ID=Cre16.g679950.t1.2.v5.5 annot-version=v5.6
Sequence

MPLWVDKYRPNSFDKFVVHKDIADNLKKLVATGDFPHTLFYGPPGAGKKTLVMALLRAIY
GAGVEKVRVETKPWKIDLPSRKLEVELTTLSSNHHLELNPADVGSNDRYVVQEIIKEMAR
SRPMGADGSRGFKVLVLNEVDRLSKEAQQGLRRTMEKYSSACRLIMVCSNVSKVMEPVRS
RCLCVRVAAPSDAQVMEVLQGVAKKENLVLPEAFAARVVDYAGRNLRRALLCLEVCRAQQ
YPFGDSQEPQRADWELYIAEVAKNIMDEQSPKQLYLVRSKLYELLANCVPPELIMRQLTF
ELLKRMDDEIKLETVSYAAQFEQRLQEGAKAIFHLEAFVARVMSNVKTYLVSCGLA*

Transcript Sequence

Transcript ID

Cre16.g679950.t1.2
Transcript Infomation

pacid=30777561 locus=Cre16.g679950 annot-version=v5.6
Sequence

CATTTAATAGCACTGTGAAAGCATAGCGACCTGCTCTTCCGCTTCCTGAGCTGCTTCTGT
CCCTGCCGTTTAAACTATTTCCTAAGCACTTCTTAACAGCTGTATTGTATTCAGATATAG
GGATAGGCGTAGTGAGGAGCAAAAATGCCCCTATGGGTGGACAAGTATCGCCCGAACTCG
TTTGACAAGTTCGTCGTGCACAAGGATATCGCGGACAACCTCAAAAAGCTGGTGGCGACG
GGGGACTTTCCACACACGTTATTCTATGGGCCCCCGGGAGCTGGCAAGAAGACGCTGGTG
ATGGCGCTTCTAAGAGCCATCTACGGCGCAGGCGTGGAGAAGGTCCGCGTGGAGACGAAA
CCATGGAAGATTGATCTGCCCAGCCGCAAGCTGGAGGTGGAGCTGACCACGCTGTCGTCA
AACCACCATTTGGAGCTCAACCCCGCGGATGTGGGCAGCAACGACCGATACGTGGTGCag
GAGATCATCAAGGAGATGGCGCGCAGTCGGCCGATGGGCGCGGACGGCAGCCGCGGGTTC
AAGGTCCTGGTGCTGAACGAGGTGGACCGGCTGTCCAAGGAGGCGCAGCAGGGCCTGCGC
CGCACCATGGAGAAGTACAGCAGCGCCTGCAGGCTGATCATGGTGTGCAGCAACGTGTCC
AAGGTGATGGAGCCAGTGCGCTCCCGCTGCCTGTGCGTGCGCGTGGCGGCACCCAGCGAC
GCGCAGGTGATGGAGGTGCTCCAGGGCGTGGCCAAGAAGGAGAACCTGGTGCTGCCGGAG
GCCTTTGCGGCGCGGGTGGTGGACTACGCCGGCCGCAACCTGCGCAgGGCGCTGCTGTGC
CTGGAGGTGTGCCGCGCGCAGCAGTACCCCTTCGGCGACAGCCAAGAGCCGCAGCGGGCG
GACTGGGAGCTGTACATTGCCGAGGTGGCCAAAAACATTATGGATGAGCAGAGCCCCAAG
CAGCTCTACCTAGTCCGCAGCAAGCTGTACGAGCTGCTGGCCAACTGCGTGCCGCCCGAG
CTCATCATGCGCCAGCTCACCTTCGAGCTGCTTAAACGAATGGACGACGAAATCAAGCTG
GAGACGGTGTCATATGCGGCCCAGTTTGAGCAGCGGCTGCAGGAGGGCGCCAAGGCCATC
TTCCACCTGGAGGCCTTCGTGGCGCGGGTCATGAGCAACGTCAAGACGTACCTGGTCTCG
TGCGGCCTGGCCTAGggcggcggggatgagaggcgggctgagaggcggttgggttggtgt
atgatgggacagggtttagacaggttggcgaggtcccggagggtgcagctgatgcccata
ccccaagcagacggcagacagtttgcagtggcagagcagaagtgcatggctggtcgaacg
ccggagttactgtaccgacaagttgttggctggctggaagtttgctgatgcgcattcctc
acgctccgggcgcccggccaggcgatagcaccacacagacacaccgcaacgccacactcg
cgatgcagagccgcagcgcacctgcaggaagatggctagcgtccacggatgagcaccaga
ggcaaccgcagagaaaatgGTTGGGTTGGTGCCTTGGTGGGTGGAAGGTTGGGGGCATGG
CCGGTGTTCGGCGGCCCAGGGCGCAGGTAGGGAGTTGGTAGGCAGGCACTTGACACAGGC
AATTGACAGGATGCAGGGCAAAAGGCAGGTACGTTGAGCGCAGTGTTCACGATGCCGGTA
CGATGAGGATGCAGGCGGACCCGCTGCCTTGTTGCTTCGCCAGTGCGAAGTCATACAGGC
GTTGATGGGCAGGGACGCTGGTGTGTGTCGCATGTGAGCGTGAGCGGCAGCGACAGCAGT
GGCGGAGGATTAGTGCGTCCTGGTAGGTGCTCGACACTTGGCATGGTACATATCGTTTGC
GATTTCGAAGTGGGAAGGTCAGGCGTCCGGCGCGCCGCCTGACCGTGAGTGGCAGAGTGG
TACCCGCTTGAGGACTGCGCGTGGCATGTGCTGAGTGCCTGCATGTACTCCTGTACGTGT
gacttcgtccaggttgtgcttgctctcggcccttaaagttcc