Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre16.g678350.t1.2
CDS Infomation

pacid=30778031 polypeptide=Cre16.g678350.t1.2 locus=Cre16.g678350 ID=Cre16.g678350.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGGTGACACGCTGCTAGCTTCTTCGCTATTCGCGGCACGCCTGCCGTCTCCGTCGGTG
CTGACAGGAAACTATGCGCCACAAACGGCAGGCATATTCGTGGAGCAGGCCCTGCAGGAG
TCGCAGCGGCGAGCTGCGGGGTCCCGGCTGGCCACGCCAGCAGCGGGAGCATCACGCGGA
AACGCGGAGGAGGTGGGTGCACTGCGCAGCCTGGCATCGCGGCACCTCGGCACTCTGGGG
CGCGGCATGGGCATGGGGCCATTCCAGCCACCGCCCCAGCCCCTGACACCCAAGGGCCGC
CTGCCCGCTGCAGCCCTGCAACCGGGGCCTCAGCCGCCGCGTTCCATCTCCACGCCACCG
CTGCGCTGCCACACACCGGTGCTCCTATCCGGAGAGCCCGTGTACCACCGGGAGGGGCGA
GGAGGAGGCGGCGGCGGGGGCGCCGGGGGCGGCGGCGGCATTGCAGCCGCCTCAGGGATA
CAGAGCAGCCTGCCGCATCTGGTTGTGCCCAATCCAGCTACTGCTGACGTCGAAGCCGGG
ACCGGTACAGCCGGAGCCGGGACGGGGCCATCGGCGGGGTTCCTCTCACCACAGCACAAC
ATTACTGCAGCTAATTCGGGCGTGCGCTTCTCCGGCGGCGCGCTCAGCCTGGGCGGCGCA
CTGCCCTCCCGCCCCGCCACCGCGCTGTCGGTGCAGGATCTAAACCTGTCCGCACGCCCC
GGCAGCCGCATGGGGCCGCCGCCTGGCACGCCCCCCTCCCGCTCCCACCTCGGCACCGGC
AGCAGCAGCTTCTCAGCCACCGGCCGTACCAACCTGCCTGGGAACGCCTCGCCGCTACGC
GGCGGCTACCGGCACACCGTCACCAAGAGGCTCATAGAGACGTCGCCGGCGGCGGCCGCG
GCGGCGGAGGCCAACCGCCTGGGCGGGTTCCGGGTGACACGTGGCATGATGTACAGCGTG
TTTCAGGAGCTGGATGAGTACGACAGCGGGCGGCTGACGTACTCGGCGTTCGAGCAGGCG
GCGTGCCGGATCGGGATGCGGCCAACGCAGGCGCGGCGGCTGTTTGACCAGCTGGACCCG
GAGGGGCACGGGTACACCACGGTGAAGCGCTGGGTGGACCCGGTGGTGGAGCGGCAGATG
GAGCAGCTGATCAAGCTATACGTGCAGGCCACACGCGGCGAGGACGGCCGTCCCAAGCAC
GTGAATGAGATCGGCAGCATCCACATGGCCGTGCAGCTCGCCATGAACAAGCTCAAGCTC
AAGCGCTGCGGCCGGGCCGTCAGCATCGAGCGCCTGATCGATGCATTCAAATTCATCGAC
CGCGACGCCAGCGGCGCTCTGAGCCTGGAGGAGCTTGAGGACGCTCTGAACGCGCTGGGC
ATTTTTGTGACACGTGACGTATTGGACACCATGATGCATACATTTGACAAGGACGGAAAC
GGAGGTGTGGACTACCTGGAATTTGTCCACAGCCTGTTCCCGAACGAGGCGAGCAACATC
AGCTCGTCCTCACGCGCCCACTGA

Peptide Sequence

PEP ID

Cre16.g678350.t1.2
PEP Infomation

pacid=30778031 transcript=Cre16.g678350.t1.2 locus=Cre16.g678350 ID=Cre16.g678350.t1.2.v5.5 annot-version=v5.6
Sequence

MGDTLLASSLFAARLPSPSVLTGNYAPQTAGIFVEQALQESQRRAAGSRLATPAAGASRG
NAEEVGALRSLASRHLGTLGRGMGMGPFQPPPQPLTPKGRLPAAALQPGPQPPRSISTPP
LRCHTPVLLSGEPVYHREGRGGGGGGGAGGGGGIAAASGIQSSLPHLVVPNPATADVEAG
TGTAGAGTGPSAGFLSPQHNITAANSGVRFSGGALSLGGALPSRPATALSVQDLNLSARP
GSRMGPPPGTPPSRSHLGTGSSSFSATGRTNLPGNASPLRGGYRHTVTKRLIETSPAAAA
AAEANRLGGFRVTRGMMYSVFQELDEYDSGRLTYSAFEQAACRIGMRPTQARRLFDQLDP
EGHGYTTVKRWVDPVVERQMEQLIKLYVQATRGEDGRPKHVNEIGSIHMAVQLAMNKLKL
KRCGRAVSIERLIDAFKFIDRDASGALSLEELEDALNALGIFVTRDVLDTMMHTFDKDGN
GGVDYLEFVHSLFPNEASNISSSSRAH*

Transcript Sequence

Transcript ID

Cre16.g678350.t1.2
Transcript Infomation

pacid=30778031 locus=Cre16.g678350 annot-version=v5.6
Sequence

GAGTATTCGAATGATACATTTGCGCAAGCCTCTACAGTGCTTCGTGTCCGTGCTCTGAGG
CCGCGGTCAGCGTGTAATCCAGCACAGCGACTTCTTGCAGATGGTTTCGTAGCACGTAGA
CTCAAAGCAATAAGATGGGTGACACGCTGCTAGCTTCTTCGCTATTCGCGGCACGCCTGC
CGTCTCCGTCGGTGCTGACAGGAAACTATGCGCCACAAACGGCAGGCATATTCGTGGAGC
AGGCCCTGCAGGAGTCGCAGCGGCGAGCTGCGGGGTCCCGGCTGGCCACGCCAGCAGCGG
GAGCATCACGCGGAAACGCGGAGGAGGTGGGTGCACTGCGCAGCCTGGCATCGCGGCACC
TCGGCACTCTGGGGCGCGGCATGGGCATGGGGCCATTCCAGCCACCGCCCCAGCCCCTGA
CACCCAAGGGCCGCCTGCCCGCTGCAGCCCTGCAACCGGGGCCTCAGCCGCCGCGTTCCA
TCTCCACGCCACCGCTGCGCTGCCACACACCGGTGCTCCTATCCGGAGAGCCCGTGTACC
ACCGGGAGGGGCGAGGAGGAggcggcggcgggggcgccgggggcggcggcggcATTGCAG
CCGCCTCAGGGATACAGAGCAGCCTGCCGCATCTGGTTGTGCCCAATCCAGCTACTGCTG
ACGTCGAAGCCGGGACCGGTACAGCCGGAGCCGGGACGGGGCCATCGGCGGGGTTCCTCT
CACCACAGCACAACATTACTGCAGCTAATTCGGGCGTGCGCTTCTCCGGCGGCGCGCTCA
GCCTGGGCGGCGCACTGCCCTCCCGCCCCGCCACCGCGCTGTCGGTGCAGGATCTAAACC
TGTCCGCACGCCCCGGCAGCCGCATGGGGCCGCCGCCTGGCACGCCCCCCTCCCGCTCCC
ACCTCGGCACCGGCAGCAGCAGCTTCTCAGCCACCGGCCGTACCAACCTGCCTGGGAACG
CCTCGCCGCTACGCGGCGGCTACCGGCACACCGTCACCAAGAGGCTCATAGAGACGTcgc
cggcggcggccgcggcggcggAGGCCAACCGCCTGGGCGGGTTCCGGGTGACACGTGGCA
TGATGTACAGCGTGTTTCAGGAGCTGGATGAGTACGACAGCGGGCGGCTGACGTACTCGG
CGTTCGAGCAGGCGGCGTGCCGGATCGGGATGCGGCCAACGCAGGCGCGGCGGCTGTTTG
ACCAGCTGGACCCGGAGGGGCACGGGTACACCACGGTGAAGCGCTGGGTGGACCCGGTGG
TGGAGCGGCAGATGGAGCAGCTGATCAAGCTATACGTGCAGGCCACACGCGGCGAGGACG
GCCGTCCCAAGCACGTGAATGAGATCGGCAGCATCCACATGGCCGTGCAGCTCGCCATGA
ACAAGCTCAAGCTCAAGCGCTGCGGCCGGGCCGTCAGCATCGAGCGCCTGATCGATGCAT
TCAAATTCATCGACCGCGACGCCAGCGGCGCTCTGAGCCTGGAGGAGCTTGAGGACGCTC
TGAACGCGCTGGGCATTTTTGTGACACGTGACGTATTGGACACCATGATGCATACATTTG
ACAAGGACGGAAACGGAGGTGTGGACTACCTGGAATTTGTCCACAGCCTGTTCCCGAACG
AGGCGAGCAACATCAGCTCGTCCTCACGCGCCCACTGATGCGCCCATTGAGTGCCTTCGC
CCATGCGCACACTGACACATATACATACGGTACCCCCACGCGTGCGTGTGCGCGCACCAT
GAGCAAGAGAGCTCTTGCGAGCATGGGTGTGCGGTGGTGGATGGACGGGTGCGCAAGCGC
ATGACGCCCTTGGCAACGTTGAGTTAGTGGGGGTTCTGCAGTGGTTGCTGATGCGTCGTT
TGGTGATGCGGCTGGGGTGCGCGGGGGAGATCTAGCATCCTAGCAAGCCTGCACGGTTGC
GCATGCAGGGGTTCCCTGGTTGCATAAATGCGCGGCAACTTTGAACGGATCTTGGGCGAG
GGGCCCTTGTCTTTTGTACGATTGGCTTGATACCGTGCGCATTCGTTCTTTCAGCATCTT
CTATAAGTACTGTGCTGCAATGCATTGGAAAGTTGTGATTGTGGACGACAATTGCTGCCT
GTTGTGGAACCAGCAGGTCTAGTGGAGGGGCGTACCTGGCTGCGGGGGTTGAAGGTTTGT
CCACTGCAAGCGAGCCCAGAGCGAAAGAGTGTTATCTGGCCCGGGCATGGGCCCTGGTTT
GTCACAATCAGGGCTGCAGGGGCCGGGGTGAGCAACTCAGGTGTCACGCCCCGTTTGGCC
TGCTTGCAAAGGTGCAAAAGGCACCCCTCTGCCTGAGAATGCGCTCTAGCAGCAGCATGT
GTTTTGCACCGAAACGTGCCACCCGCTGACCCGCAATTGCATCCGCCCCTGGCCAGTGTG
TCGGGTACTATCGCCTGTGTAGCAGGGTAGCTGGTCAAAAGGCATCTCAAGATA