Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre16.g649700.t1.1
CDS Infomation

pacid=30777115 polypeptide=Cre16.g649700.t1.1 locus=Cre16.g649700 ID=Cre16.g649700.t1.1.v5.5 annot-version=v5.6
Sequence

ATGCCAAGCTTGTTATTAAGACCGGTGCCGTGCGCCACCTCACGCACGCCGCGAGGTTTG
TTGGGCGCGCCCATCGCGGCGTCGGTCGCCGTTGCTCTTGTTGAGACGACGACGGTCGAG
CCAGCCGCGGAGGCTGCCGTAGGCCCTGCGTCGGACCCGGAGGCTCTTGCGGCTCTCGCC
GAGGCGCAGCGGCTTGTGCGTTGCGGGCCGACCCCGCTCGGTCGCGGCCTGGTTGCCTTG
CAGCAGTTGGACCGCCAGTGCATCGTGTCGGTGCCGCTGCAAAACGCACTCGTCATCAGC
GACGAGCCCCTGAGCGGCATCAGCGTGTTTGGCGACCGTTGCCAGGAGCTGTGGCAGGAG
GCACACGGCCGCCTGCCGCCGCAGCTGCTGGATTTCATCACGGGTGAGGCGCGCTGGGAC
GTGCGCATGACCGCCTGGCTGCTGTGGGTGGCGTCGGAGCTGCCCGACTCGCCGCTGTGG
GCCGCATACATCGCCACTCTGCCGCCCGCGGACGAGGTGACGTGCCTCATCAACTACGGA
CCGGATGTGGCCAAGGAGCTGCAGATTAAAGATCTCGTGGAGGAGGCCAAGTCGCAGTAC
AACTGGGCCATGGGCGTGCACCGCAAGTACTTTGACGGTGTGCAGGGCGAGTTGGCGCAG
CTCAAGTTGGCGGCCAGCGCCCGAGACACCATGTGGGCCATGTCCATGGTTCGCACGCGC
ACCTTCAGCGAGAACGTCAACGGCGAGGGGCTGACGCTCATGGTTCCCTACGCCGACCTG
GCCAACCACTCCTTCCGGCCCAACGCCACCTTCTGCATGGCGCGAGACAACAAGCGGTTC
GAGCTGCGGCTGCTGGGTCCGCTGGCACCGGGCGAGGAGGCAGCCATCAGCTACGGCGAG
ACCAAGCCCAACCCCGAGGTTATGCGTGACTACGGCTTTGTCGTACCGGGCAACCCCAAC
GACCGAATCAAGCTGCCTGATCAGGACCAGCTGCCGCCGCTGTACGGCGCGTCCGTGATG
GAGTCGGTGGGCTTCAAGGGCGACTGGCGGGAGGGCACTGTGGCGCCCAAGCGGACCGTG
CTGGAGGCAGCGGATGGCGACCCAATGGAGCGAGTCAACCTCAACCGCCGCCGGTGTGCG
CTGCTGTCCATGACATTCACAGACGGCTTTCCGTCAGCCAGCCAGTCACAAGGTGGCCTG
TTTGGGAACTGGCCTCCCAAGGCCTGGACCGATTCGGGGCGCCCGCCGCCGCAACACGTG
CCGGCACAGCCTCGCGCGTTCGAGCTGGAGCGCGCAAATGTGGCGGCGGTACGGCATTCG
TACCAGGCGGCGCTGGACGAGCTGCCCACGTCCCTGCAGACAGACCTGCAGCTGCTCGCG
TCGCACGACAGCGGCGAGTTGCGGCTCGACGGGCTGGTGGCGGGCGCCGTACGGTGTCGT
ACGGAGCACAAGCTTCTGCTGGCGGAGGCAGTAGCAATTTTGGACGAGTACGACCGCTGG
CTTGCGAGGCACCAGGAAAAGATCGCAACCCGGGCCCGGTAG

Peptide Sequence

PEP ID

Cre16.g649700.t1.1
PEP Infomation

pacid=30777115 transcript=Cre16.g649700.t1.1 locus=Cre16.g649700 ID=Cre16.g649700.t1.1.v5.5 annot-version=v5.6
Sequence

MPSLLLRPVPCATSRTPRGLLGAPIAASVAVALVETTTVEPAAEAAVGPASDPEALAALA
EAQRLVRCGPTPLGRGLVALQQLDRQCIVSVPLQNALVISDEPLSGISVFGDRCQELWQE
AHGRLPPQLLDFITGEARWDVRMTAWLLWVASELPDSPLWAAYIATLPPADEVTCLINYG
PDVAKELQIKDLVEEAKSQYNWAMGVHRKYFDGVQGELAQLKLAASARDTMWAMSMVRTR
TFSENVNGEGLTLMVPYADLANHSFRPNATFCMARDNKRFELRLLGPLAPGEEAAISYGE
TKPNPEVMRDYGFVVPGNPNDRIKLPDQDQLPPLYGASVMESVGFKGDWREGTVAPKRTV
LEAADGDPMERVNLNRRRCALLSMTFTDGFPSASQSQGGLFGNWPPKAWTDSGRPPPQHV
PAQPRAFELERANVAAVRHSYQAALDELPTSLQTDLQLLASHDSGELRLDGLVAGAVRCR
TEHKLLLAEAVAILDEYDRWLARHQEKIATRAR*

Transcript Sequence

Transcript ID

Cre16.g649700.t1.1
Transcript Infomation

pacid=30777115 locus=Cre16.g649700 annot-version=v5.6
Sequence

CACACAGGCCACATAGGTTTTGTAGAGCAGCAAGAGCGACACTATGCAGCTATCCTTTGC
TTGCAGCGGGCCATGTGTCCCGCGCGTCGCTGGCCGGCCACATGCGGGCGCTTCTATGCC
AAGCTTGTTATTAAGACCGGTGCCGTGCGCCACCTCACGCACGCCGCGAGGTTTGTTGGG
CGCGCCCATCGCGGCGTCGGTCGCCGTTGCTCTTGTTGAGACGACGACGGTCGAGCCAGC
CGCGGAGGCTGCCGTAGGCCCTGCGTCGGACCCGGAGGCTCTTGCGGCTCTCGCCGAGGC
GCAGCGGCTTGTGCGTTGCGGGCCGACCCCGCTCGGTCGCGGCCTGGTTGCCTTGCAGCA
GTTGGACCGCCAGTGCATCGTGTCGGTGCCGCTGCAAAACGCACTCGTCATCAGCGACGA
GCCCCTGAGCGGCATCAGCGTGTTTGGCGACCGTTGCCAGGAGCTGTGGCAGGAGGCACA
CGGCCGCCTGCCGCCGCAGCTGCTGGATTTCATCACGGGTGAGGCGCGCTGGGACGTGCG
CATGACCGCCTGGCTGCTGTGGGTGGCGTCGGAGCTGCCCGACTCGCCGCTGTGGGCCGC
ATACATCGCCACTCTGCCGCCCGCGGACGAGGTGACGTGCCTCATCAACTACGGACCGGA
TGTGGCCAAGGAGCTGCAGATTAAAGATCTCGTGGAGGAGGCCAAGTCGCAGTACAACTG
GGCCATGGGCGTGCACCGCAAGTACTTTGACGGTGTGCAGGGCGAGTTGGCGCAGCTCAA
GTTGGCGGCCAGCGCCCGAGACACCATGTGGGCCATGTCCATGGTTCGCACGCGCACCTT
CAGCGAGAACGTCAACGGCGAGGGGCTGACGCTCATGGTTCCCTACGCCGACCTGGCCAA
CCACTCCTTCCGGCCCAACGCCACCTTCTGCATGGCGCGAGACAACAAGCGGTTCGAGCT
GCGGCTGCTGGGTCCGCTGGCACCGGGCGAGGAGGCAGCCATCAGCTACGGCGAGACCAA
GCCCAACCCCGAGGTTATGCGTGACTACGGCTTTGTCGTACCGGGCAACCCCAACGACCG
AATCAAGCTGCCTGATCAGGACCAGCTGCCGCCGCTGTACGGCGCGTCCGTGATGGAGTC
GGTGGGCTTCAAGGGCGACTGGCGGGAGGGCACTGTGGCGCCCAAGCGGACCGTGCTGGA
GGCAGCGGATGGCGACCCAATGGAGCGAGTCAACCTCAACCGCCGCCGGTGTGCGCTGCT
GTCCATGACATTCACAGACGGCTTTCCGTCAGCCAGCCAGTCACAAGGTGGCCTGTTTGG
GAACTGGCCTCCCAAGGCCTGGACCGATTCGGGGCGCCCGCCGCCGCAACACGTGCCGGC
ACAGCCTCGCGCGTTCGAGCTGGAGCGCGCAAATGTGGCGGCGGTACGGCATTCGTACCA
GGCGGCGCTGGACGAGCTGCCCACGTCCCTGCAGACAGACCTGCAGCTGCTCGCGTCGCA
CGACAGCGGCGAGTTGCGGCTCGACGGGCTGGTGGCGGGCGCCGTACGGTGTCGTACGGA
GCACAAGCTTCTGCTGGCGGAGGCAGTAGCAATTTTGGACGAGTACGACCGCTGGCTTGC
GAGGCACCAGGAAAAGATCGCAACCCGGGCCCGGTAGTAGCATCGAGCATGCACGCCGAG
GCCGGCCGTAGCAGGAGGTGTGGGCGCAGCAACAGCAGGCCGGCGCAGCTGTACCGTACT
AGGGAAGACGTGGGGACTGAGTATGCACAAATCACCACTTCACCTCTAAGCCTGAACTTT
AAAGATACAGACAATAAGCACATCGTGATTGTGAATGAGCCGATGTGCCACTGTATTCCT
TGCTTACTTTGCGGATCCTTGAGCAGCATCGACGTGCGGAGAAATGCGACGTTAAGCATC
CAGCTGTGTCTTGACATGAACAACACAGACTTCCGTTGCCGTTGTTTTCCCTTGTTTGCG
CGCGCATGCAGTCGGTGCGTTGCTTTTGTCTGAGGCGGCCGTCCGTGCATGCCGTATGCC
TGCTTATGCCCGGCAGGGCGGCTCAGGGCGGCTGTGCCAGATGCATGACACGGCACGGTG
CATGAAAGTTTGACGGAATGGACAGCAGGACAAGTGTAGTAGTGTGTAATGCAGTCTTAG
GTAACCTGGTGCTCTACCAGGGGGGGGGCAGCCGTTCATGTGAAGGACGGAGTGATTAAG
ACACCCAGTATGAagtgccgacgggattgaccttatgattcaaatgcacagagctcaaca
agagcgttcagaatctgcctgaagcgttttgatcagggtacggtacgtaaactcaagtga
cgggccctcatcccgaaggtttcgtcacgcagcatgtgggtggggctgccagattGAGAA
ttgtagaacgtttgtcctctggaatgcggccgcgtgtccgtccCCTGGCACCCCGCTGGC
TCCACGATGCATCGGGGCGGCAGGGGGCGGTGCTGCGTATATATGGTCAGGGCTTGCACT
TTTGTCCAGGGGCAGGCCCCGCCGCTGGAGAGAAGGACCCTAACCGTGTTCTCGCCCACG
GCATTCAGGGGCTTAttatcgatgtgcgttgcggaattaatgcgtacgtagacccgagcg
gaaggcggcttaaaagcggcTTTAAGCGTTTGGACTACGCCACCCTGCCTGAGGTGCTCT
GAgggcttctacgtgctcactccaccctctcccacccacccccggcaagggggagttggc
gagattcggggatagtatgcagccccacgcggtgaCTAGGTCGCCTGGAAGAGTGAAAGT
CACTCACTAAAGCACTCCATGACGGAAGTCAGTCAATTAGTAAGCGCCCCCGCACgga