Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre13.g587000.t1.2
CDS Infomation

pacid=30784703 polypeptide=Cre13.g587000.t1.2 locus=Cre13.g587000 ID=Cre13.g587000.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCAGGCAAACGAAAATCCTTGCGTGATGAGATAGCAGACTTGCTGGGCCCGGCGCCT
GCGCGGGAACATGACCCCGATGCGCTTGACATGGGCGATGGAGCTCAGCTCGCGGACGAC
GGCGATTATGAAGAGGCGCGGCGGGCGCCGACGCGGAGAGCTCCGGAGAATTCTATGCTA
ATGCGCGGGGAAATCGACCTCGAGGACGCAGCGTACCGTGGCCGGAAATCCTCGCGTGCT
GCTGTATTTGGGGAGGCGGACGATGATGACGAGGAGGACGATGATGAGGATGACGTGGAT
CTGGATCTGGGAGGCAGCGACGACGAGGATGGCGATGAGGATGAGGAGGATGAGGACGAG
GGCGGGAGGCGCTCAGCAGCAGCACGTGCGGGGCCCAGCGGGCGCGGGACAGGGCAAGCA
GCGGCAGCGACAAAGGGGCGACGGGGCGCGGCCAATGGCCACGCAGCCAGCGGCTCTGAA
GACGGGCTAGGCGATGCAGACGAGGACGAGGAGGAGGGCGACGATGATGAGGACGGCGGG
GACGACGAGGGCGCCGCAGGGACGGGGACAGGGACAGAGGACGGCGATGAGGATGAGGAC
GGGGACGGCGCAGCCGCGGCAGTGGCAGCGGCGGCCAAGGCCGCGCGCGCTGCCACGCGG
CGGCGCGCCACGGCTGGCGGCGATGACGACCTAGACGCGTTGGAGGCCGAGTATGAGGCG
CTGCAGGAGGAGGACGAGGCTCAGCTGATGACGCTGCGGCAGAAGGGCGAGCGGGACCGG
GTCAAGGGGCTGGCTGTGCGCAACCAGCAGGCTCTGTACGAGCGGGCATTGGAGCAGCGC
ATCCTGCTGCAGCGCTGCCTGCAGGCCAGCAACGGACTGCCGCGCCCGGACACACACGCG
GCGCTGGTGGGCACGCAGCCGGAGGTCCGCGAGGGTTTCGCCGACCTTGCCAGCGCCGCG
CGCTCCACCCTGACCCAGCTGATGGAGTTGCAGCACACGCTCATGGCCCGCACACCCGGC
ATCCAACTGCCAGCAGCCGCCGCGCCGCCGGCGCCCTCCAAACGGGACGCCAAGCGCAAG
CGCGACCAGAATGCCGACGACGAGGATGAGGACGACGACGAAGAGCAGGAGGAGGAGGAG
GAGGAGGATGGCGGCGCGGCGTTGGAGTCGTTGTGGCTGCGGCTGAGCAGTCAGCACGAG
GCGCTGACGCCCTACCGGGACACGGCACTGGACAGCTGGCACCGCCGCACGGTGCTCAGC
AGCGGCAGCGGCGCGATGCGCAACGCCGGGCTGCGTGCGCTCAACCAGTCCATCAGCAGC
CAGGTGGCGGCGCTGATGCGGGACCCAGCCAAGTTCATCAAGCGCACGCGCCTCACGCTC
AGCGCCTGCCCGCGCGTGCTCTGCGAGCCGCCGCACGAGTCGGCGGCCGCCACCACGGCG
GCTGACCCTCACGCCGCCGCGGACGTTGAGGCGGAGACGGCGGCGCTGGACGGCAGCAGC
CGCCGCGGCGGTGCCGCTGCCGGGGCTTCGGCGAGCGAGGCGCGCGATGTGCTTGAGGAG
GAGCGCGACGGGGAGACGTACGATGACGCGGAGTTCTATCAGCAGCTGCTGAAAGAGTTC
CTTGACAAAGGAATGGAGGGCGCGGCGGCCGGCGCACCCAAGGCGGCAAAGAAGCGAAAG
CTGGTGGACCGGAGAGCCAGCAAGGGACGCAAGCTGCGATACCATGTGCAGGAGAAGCTG
GTTGCGTTCATGGCACCAGTGGACTTCGAGCCGCCGACCTTCGCGGCGCAACTGTTCGCG
AACCTTTTCGGGCACGCGGGGCACTGA

Peptide Sequence

PEP ID

Cre13.g587000.t1.2
PEP Infomation

pacid=30784703 transcript=Cre13.g587000.t1.2 locus=Cre13.g587000 ID=Cre13.g587000.t1.2.v5.5 annot-version=v5.6
Sequence

MSGKRKSLRDEIADLLGPAPAREHDPDALDMGDGAQLADDGDYEEARRAPTRRAPENSML
MRGEIDLEDAAYRGRKSSRAAVFGEADDDDEEDDDEDDVDLDLGGSDDEDGDEDEEDEDE
GGRRSAAARAGPSGRGTGQAAAATKGRRGAANGHAASGSEDGLGDADEDEEEGDDDEDGG
DDEGAAGTGTGTEDGDEDEDGDGAAAAVAAAAKAARAATRRRATAGGDDDLDALEAEYEA
LQEEDEAQLMTLRQKGERDRVKGLAVRNQQALYERALEQRILLQRCLQASNGLPRPDTHA
ALVGTQPEVREGFADLASAARSTLTQLMELQHTLMARTPGIQLPAAAAPPAPSKRDAKRK
RDQNADDEDEDDDEEQEEEEEEDGGAALESLWLRLSSQHEALTPYRDTALDSWHRRTVLS
SGSGAMRNAGLRALNQSISSQVAALMRDPAKFIKRTRLTLSACPRVLCEPPHESAAATTA
ADPHAAADVEAETAALDGSSRRGGAAAGASASEARDVLEEERDGETYDDAEFYQQLLKEF
LDKGMEGAAAGAPKAAKKRKLVDRRASKGRKLRYHVQEKLVAFMAPVDFEPPTFAAQLFA
NLFGHAGH*

Transcript Sequence

Transcript ID

Cre13.g587000.t1.2
Transcript Infomation

pacid=30784703 locus=Cre13.g587000 annot-version=v5.6
Sequence

TTAATTGTGTTTTCGGCACGAAACAACACCTGGCAATTCACCAATTGCAGTTTATACCAG
CCCCAGGACAGTTCTTGGACAGTCGAATAGTACGATGTCAGGCAAACGAAAATCCTTGCG
TGATGAGATAGCAGACTTGCTGGGCCCGGCGCCTGCGCGGGAACATGACCCCGATGCGCT
TGACATGGGCGATGGAGCTCAGCTCGCGGACGACGGCGATTATGAAGAGGCGCGGCGGGC
GCCGACGCGGAGAGCTCCGGAGAATTCTATGCTAATGCGCGGGGAAATCGACCTCGAGGA
CGCAGCGTACCGTGGCCGGAAATCCTCGCGTGCTGCTGTATTTGGGGAGGCGGACGATGA
TGACGAGGAGGACGATGATGAGGATGACGTGGATCTGGATCTGGGAGGCAGCGACGACGA
GGATGGCGATGAGGATGAGGAGGATGAGGACGAGGGCGGGAGGCGCTCAGCAGCAGCACG
TGCGGGGCCCAGCGGGCGCGGGACAGGGCAAGCAGCGGCAGCGACAAAGGGGCGACGGGG
CGCGGCCAATGGCCACGCAGCCAGCGGCTCTGAAGACGGGCTAGGCGATGCAGACGAGGA
CGAGGAGGAGggcgacgatgatgaggacggcggggacgacgagggcgccgcagggacggg
gacagggacagaggacggcgatgaggatgaggacggggacggcgcagccgcggcagtggc
agcggcggccaaggccgcgcgcgctgccacgcggcggcgcgccacggctggcggcgatga
cgacCTAGACGCGTTGGAGGCCGAGTATGAGGCGCTGCAGGAGGAGGACGAGGCTCAGCT
GATGACGCTGCGGCAGAAGGGCGAGCGGGACCGGGTCAAGGGGCTGGCTGTGCGCAACCA
GCAGGCTCTGTACGAGCGGGCATTGGAGCAGCGCATCCTGCTGCAGCGCTGCCTGCAGGC
CAGCAACGGACTGCCGCGCCCGGACACACACGCGGCGCTGGTGGGCACGCAGCCGGAGGT
CCGCGAGGGTTTCGCCGACCTTGCCAGCGCCGCGCGCTCCACCCTGACCCAGCTGATGGA
GTTGCAGCACACGCTCATGGCCCGCACACCCGGCATCCAACTGCCAGCAgccgccgcgcc
gccggcgcccTCCAAACGGGACGCCAAGCGCAAGCGCGACCAGAATGCCGACGACgagga
tgaggacgacgacgaagagcaggaggaggaggaggaggaggaTGGCGGCGCGGCGTTGGA
GTCGTTGTGGCTGCGGCTGAGCAGTCAGCACGAGGCGCTGACGCCCTACCGGGACACGGC
ACTGGACAGCTGGCACCGCCGCACGGTGCTCAGCAGCGGCAGCGGCGCGATGCGCAACGC
CGGGCTGCGTGCGCTCAACCAGTCCATCAGCAGCCAGGTGGCGGCGCTGATGCGGGACCC
AGCCAAGTTCATCAAGCGCACGCGCCTCACGCTCAGCGCCTGCCCGCGCGTGCTCTGCGA
GCCGCCGCACGAGTCGGCGGCCGCCACCACGGCGGCTGACCCTCACGCCGCCGCGGACGT
TGAGGCGGAGACGGCGGCGCTGGACGGCAGCAGCCGCCGCGGCGGTGCCGCTGCCGGGGC
TTCGGCGAGCGAGGCGCGCGATGTGCTTGAGGAGGAGCGCGACGGGGAGACGTACGATGA
CGCGGAGTTCTATCAGCAGCTGCTGAAAGAGTTCCTTGACAAAGGAATGGAGGGCGCGGC
GGCCGGCGCACCCAAGGCGGCAAAGAAGCGAAAGCTGGTGGACCGGAGAGCCAGCAAGGG
ACGCAAGCTGCGATACCATGTGCAGGAGAAGCTGGTTGCGTTCATGGCACCAGTGGACTT
CGAGCCGCCGACCTTCGCGGCGCAACTGTTCGCGAACCTTTTCGGGCACGCGGGGCACTG
AGCTGGCGCCTTGTGTAGGCATATCACGATGGCGCCAGCCGGACAGGATGGGCCCGGTGC
AGGAAGAACATGCAGCCTGTGACGCTGCAAATGGCGATGGAAAGGAGGCTGGGAATGTCG
CGCGGGAGTGCGGAGAGAGGATGTGGGGGCCGGACCGCGGTTGAAGGCATGGGTTTGGGC
ATTGCAGAGCACGAGTCTTGCTTGCCAGACCCTGGCGCACTGTGTAAATGATGAACACAC
ATTGTACTGTTGCTGAGTGCCGGACAGTGACACCTTGGGAAGGTGGATGGGTCCAGCGGG
AAACCCGGTAATTCACGAAACAATGTCCATTGAAATGGCTCACTCGGGGTCGCCGATACC
CTGAGTCTTGTAACCTGCAATGCAT