Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre13.g572200.t1.2
CDS Infomation

pacid=30783977 polypeptide=Cre13.g572200.t1.2 locus=Cre13.g572200 ID=Cre13.g572200.t1.2.v5.5 annot-version=v5.6
Sequence

ATGAGTGCACAGTATCGAGCTCGTGTGGGTGCTCATGGCGGGCTGCCCCAGCTGCAACAC
CCGCGGGCAGCATCGCGAGATGTCGATGTCTTCACGCCGGAGGCGTATGAGCCGACTTAC
TGCCTGTACAACAACCTGAACCCGCGGACCATGAAGCGCGAGTCGGGAACGCTGTGGGGC
GCAACGCTGCTTGTGGCAGGCACCACCGCGGGCGCCGGCATCCTAGCGCTACCGGCCGTG
ACGCAGGAGTCGGGCTTCGCTGCCACCTCCGGTGCGATGGTGGGCGCCGCGGCCTTCGCC
ATGGCCACAGGGCTGCTGGTCGCCGAGGTGGCGCTCAATGTGGTGGCCCGGTACGGCAGC
GACAACGTCACCTTCACCACCATGGCCGAGAAGACTCTGGGTGGCACGGGCGCCTCCGCC
GCCACCTTCCTCTACATCTTCCACAACTACGCAATCCTTGTGGCGTACGTGGCTCGTGCC
GGTCAGATCCTGGCAGTGGCTGCGGGCGTGCCCCAGCTGGCCGCCGCCGCGCTGTTCTCA
GTGGGGCTGGGCGGCATGTGCTACGTCACCACGCCATCCCAGTTTGACCGGGTCAACGGG
GCGCTGCTGGCAACATACGCGTTGACCTTTGCGGCGCTGCTGACCATTGCGGGCTCGGAG
GTGGACGTGCCGGTGCTGGCCGCCGCCAACTGGGGCGCCGTGCCGCCCACCCTGCCGGTG
CTGGCCCTGGCCTTCGTGTTCCACAACGTCGTGCCGGTTGTGGTGCACAACCTGGAATGT
GACGCCGGCAAGATCCGCTCCTCCATCATCATGGGTGTGATCATCCCGCTGATCATGTAC
CTCCTGTGGGACGGCGTCATCCTCGGATCCCTAGATAACCTGGCGGCGACGGCCGCAGAG
GCCGCCGCCGCGGCGGCAGCAGCCATCTCCGCCGCCTCCGCGGCGGCGGCGGCGGCAGCC
GCCGCCGCAGCGGCCGCGGAAGCGGCCGCGGCCGCGGCCACCGCCGCCGCCGGTGACGCC
GCGGCGGGTGTGGGCGCTTCCGCCGTGGCGGCGGCGGACGCCGCCGCCACTGCTGCGGCA
TCAGCCGCGGCGGCGGCCGCGGATGCGGCCGCCGGCAGCGGAATCGCCGGCGCTCCGGCG
ATTGCTAGCTCCGCAGAGCTGACTGCTGCGCTGGACCCGCTGGTGCTGCTGCAGCAGTCG
GGTGGTCCGGTGGTGGCGCCGCTGGTGCAGGTGTTCAGCTTCCTGGCCATCGCCACCTCC
TTCACCGGGTTCGTGCTGGCGGCGGTGGACTTCCTGCCGGACGCCTTCAAGCCGCTGCGC
GACGTGCCGCGTGCGGGCCGCTACGCGCTGGTGTGCCTGCCCCCCATCCTGCTGTCCACC
GCCTCCCCCGGCATCTTCTTCGCCTCGTTGGACTTCGCGGGCACGTACGGCGTTATGACG
CTGTACGGCATGATGCCGGCCATGATGGCCTGGAGCAGCAGGTACGGCAGCAATACGGCA
GATAGTGCGGCGGGTGCGGTTGGGGGCATCGGCGGTTCAGAGGCGACGACGACGGCGGCT
GCGGCGGCAGTTACAGCGCTGGCGCCGGAGGTGCAAGGGGCGCAGAAGGCAGCGGCAGGG
GGCGGTGTGGAGGGTGCTCGGACGGTGGAGCTGGTTCCGGGCGGACAGGCGGTGCTGCTG
TTGACTGGGGGAGCGGCGGCGGCGGTGATCGTGAGCCAATGGGTCATGTAA

Peptide Sequence

PEP ID

Cre13.g572200.t1.2
PEP Infomation

pacid=30783977 transcript=Cre13.g572200.t1.2 locus=Cre13.g572200 ID=Cre13.g572200.t1.2.v5.5 annot-version=v5.6
Sequence

MSAQYRARVGAHGGLPQLQHPRAASRDVDVFTPEAYEPTYCLYNNLNPRTMKRESGTLWG
ATLLVAGTTAGAGILALPAVTQESGFAATSGAMVGAAAFAMATGLLVAEVALNVVARYGS
DNVTFTTMAEKTLGGTGASAATFLYIFHNYAILVAYVARAGQILAVAAGVPQLAAAALFS
VGLGGMCYVTTPSQFDRVNGALLATYALTFAALLTIAGSEVDVPVLAAANWGAVPPTLPV
LALAFVFHNVVPVVVHNLECDAGKIRSSIIMGVIIPLIMYLLWDGVILGSLDNLAATAAE
AAAAAAAAISAASAAAAAAAAAAAAAEAAAAAATAAAGDAAAGVGASAVAAADAAATAAA
SAAAAAADAAAGSGIAGAPAIASSAELTAALDPLVLLQQSGGPVVAPLVQVFSFLAIATS
FTGFVLAAVDFLPDAFKPLRDVPRAGRYALVCLPPILLSTASPGIFFASLDFAGTYGVMT
LYGMMPAMMAWSSRYGSNTADSAAGAVGGIGGSEATTTAAAAAVTALAPEVQGAQKAAAG
GGVEGARTVELVPGGQAVLLLTGGAAAAVIVSQWVM*

Transcript Sequence

Transcript ID

Cre13.g572200.t1.2
Transcript Infomation

pacid=30783977 locus=Cre13.g572200 annot-version=v5.6
Sequence

attgttcctggggagatgcctaggtccccagcccctagagctttcggtcttttctgccct
ccccagcccggtgcaaaaaggtccctggggagccgcccatagctcCACCTGAGCGCCAAC
GCAAACAGCGACTCCTCCAGCTTGGTTTATTGTCAGCGCATTACTGATTGAGCATACCTC
GATCTAACTCGTATCCATCCAACCATGGATCTTAGGGCTGCGCGAGCACAGGCCGTGGAC
CGTAGACCACCCTCGCGGCAGGCTGTATTTTCGCACCGAGCGACGCCATGCCTTTCACGG
ACGCCCAGCTTAATGAGTGCACAGTATCGAGCTCGTGTGGGTGCTCATGGCGGGCTGCCC
CAGCTGCAACACCCGCGGGCAGCATCGCGAGATGTCGATGTCTTCACGCCGGAGGCGTAT
GAGCCGACTTACTGCCTGTACAACAACCTGAACCCGCGGACCATGAAGCGCGAGTCGGGA
ACGCTGTGGGGCGCAACGCTGCTTGTGGCAGGCACCACCGCGGGCGCCGGCATCCTAGCG
CTACCGGCCGTGACGCAGGAGTCGGGCTTCGCTGCCACCTCCGGTGCGATGGTGGGCGCC
GCGGCCTTCGCCATGGCCACAGGGCTGCTGGTCGCCGAGGTGGCGCTCAATGTGGTGGCC
CGGTACGGCAGCGACAACGTCACCTTCACCACCATGGCCGAGAAGACTCTGGGTGGCACG
GGCGCCTCCGCCGCCACCTTCCTCTACATCTTCCACAACTACGCAATCCTTGTGGCGTAC
GTGGCTCGTGCCGGTCAGATCCTGGCAGTGGCTGCGGGCGTGCCCCAGCTGGCCGCCGCC
GCGCTGTTCTCAGTGGGGCTGGGCGGCATGTGCTACGTCACCACGCCATCCCAGTTTGAC
CGGGTCAACGGGGCGCTGCTGGCAACATACGCGTTGACCTTTGCGGCGCTGCTGACCATT
GCGGGCTCGGAGGTGGACGTGCCGGTGCTGGCCGCCGCCAACTGGGGCGCCGTGCCGCCC
ACCCTGCCGGTGCTGGCCCTGGCCTTCGTGTTCCACAACGTCGTGCCGGTTGTGGTGCAC
AACCTGGAATGTGACGCCGGCAAGATCCGCTCCTCCATCATCATGGGTGTGATCATCCCG
CTGATCATGTACCTCCTGTGGGACGGCGTCATCCTCGGATCCCTAGATAACCTGGCGGCG
ACGGCCGCAGAGgccgccgccgcggcggcagcagccatctccgccgcctccgcggcggcg
gcggcggcagccgccgccgcagcggccgcggaagcggccgcggccgcggccaccgccgcc
gccggtgacgccgcGGCGGGTGTGGGCGCTTCCgccgtggcggcggcggacgccgccgcc
actgctgcggcatcagccgcggcggcggccgcggatgcggccgccggcagcggaatcgcc
ggcgCTCCGGCGATTGCTAGCTCCGCAGAGCTGACTGCTGCGCTGGACCCGCTGGTGCTG
CTGCAGCAGTCGGGTGGTCCGGTGGTGGCGCCGCTGGTGCAGGTGTTCAGCTTCCTGGCC
ATCGCCACCTCCTTCACCGGGTTCGTGCTGGCGGCGGTGGACTTCCTGCCGGACGCCTTC
AAGCCGCTGCGCGACGTGCCGCGTGCGGGCCGCTACGCGCTGGTGTGCCTGCCCCCCATC
CTGCTGTCCACCGCCTCCCCCGGCATCTTCTTCGCCTCGTTGGACTTCGCGGGCACGTAC
GGCGTTATGACGCTGTACGGCATGATGCCGGCCATGATGGCCTGGAGCAGCAGGTACGGC
AGCAATACGGCAGATAGTgcggcgggtgcggttgggggcatcggcggttcagaggcgacg
acgacggcggctgcggcggcagttacagcgctggcgccggaggtgcaaggggcgcagaag
gcagcggcagggggcggtgTGGAGGGTGCTCGGACGGTGGAGCTGGTTCCGGGCGGACAG
GCGGTGCTGCTGTTGACTGGGGGAGCGGCGGCGGCGGTGATCGTGAGCCAATGGGTCATG
TAAGTGTGATGTTAAAGGTTAGAGATGTCAGGCGGTGAGAGCAGGCTATCCAGGCTGAAC
TGCTGGCTTGTGAGCGGGAGCGTGGCGGGCTTAATTTTGCTACGGTGTGCATGGCGTGTA
CGTAGTGCAATGGCACGGCTGCATACTGATGAGTGAGAGCGGAAAGATGAGATGCATGAT
AATGGGTAAAAGCATCGTCGATAACTTTTACGAGCGGAAAGACTCGTTTCGTGAATCCGG
GGCCCAGATTCGGGCATGTGACAGCTGACGCAATTGGCGAACGATGTGGTGGAATGGTGG
ATGCTAGCACTCAAttttgggctgagccccccgagcgaagcgatgaggagtgctgtggct
ggaggatttcctgctgtttggacgtgtttggttgtcctgtgctggctgtgcttgtgcttg
gcagcgggacgtggctgtacaaaccgattccggctatgtccgggagatgaggtagacgct
ggcggcctcagacttgatacgtggctcagccatttttgccatgcgagggaagagatcttg
tcacggcgcacAACTTGTGTCAGACGGCGCGCAGGATGAGCCGGAGCACAGTGTTCCGCG
GCCAATGGTACGGGGGGCCTGATCATTGCCTGATGGGTTCAAGCTCCGGGCGCTGGATAT
ACGTAAATCTGTAAATTCACATGCTC