Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g556600.t1.2
CDS Infomation

pacid=30792763 polypeptide=Cre12.g556600.t1.2 locus=Cre12.g556600 ID=Cre12.g556600.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCTGCCCAAGAATTCTACGCACCAATCCTAGCATCGACTGGTGTCTACAAATTCTAC
ATTGACGGTCAGTGGAAGGAGAGCGTATCCGGGAAGTCGGTTGCCATCTCGAACCCTTCC
ACGCGCCAGACAGCGTACCAGGTCCAGGCCTGCACACAAGATGAGGTGAACAAGATGTTT
GAGTCGGCAAAGGTGGCCCAGAAGGCTTGGGCGCGGACTCCGCTGTACAAGCGCGCGGAG
GTGCTGCACAAGGTGGCCTCGCTGATGCGCCAGTACGCGCAGCCCATCGCGGACTGCCTG
GTCAAGGAGGTGGCCAAGCCGAGCAAGGACTCCCTGACGGAAGTGGTGCGCTCCGCAGAC
CTGATCGACTACACGGCGGAGGAGGGCGTGCGCTACCTGGGCGAGGGGCAGCTGCTCAAC
TCCGACAGCTTCCCGGGCAACGCCCGCAACAAGCTGTGCCTGGTGTCCAAGGTGCCGCTG
GGTGTGGTTCTGGCCATCCCGCCCTTCAACTACCCGGTCAACCTGGCGGTCTCCAAGCTG
GCCCCGGCGCTGATGGCGGGCAACGCGGTGGTGCTCAAGCCGCCCACACAGGGCGCCGTG
GCGGGCATCCACATGGTGCAGTGCTTCCATGCTGCGGGCTTGCCCGCCGGCCTGCTGTCA
GTGGCCACCGGTCGCGGCGCCGAGATTGGCGACTTCCTGACAACCCACCCCGACGTCAAC
TGCATCTCGTTCACCGGCGGAGACACGGGCATCTCCATCGCCAAGAAGGCCGGCATGGTG
CCGCTGCAGATGGAGCTGGGCGGCAAGGACGTGTGCATCGTGTGCGAGGACGCCGACCTG
GACCTGGCGGCAAAGCACATCATCAAGGGCGGCTTCAGCTACAGCGGCCAGCGCTGCACC
GCCGTCAAGCTGGTGCTGGTGGCGGCGCCCGTGGCGGACCGACTGGTGGCGGCGGTGGCG
GCGGGCGTGGCCAAGCTGAGTGTGGGGCGGCCGGAGGACGACTGTGACATTACGCCGGTG
GTGTCGGAGAGCTCGGCCAACTTCATCGAGGGGCTGGCGATGGACGCCAAAGCCAAGGGC
GCCACCTTTGTGACGGGCGAGTGGCGGCGCGAGGGCAACCTGATCTGGCCGGTGCTGCTG
GACCACGTGACGGCCGACATGCGGCTGGCGTGGGAGGAGCCGTTCGGGCCGGTGCTGCCG
GTGATGCGTGTGAGCAGCGTGGAGGCGGCGGTGGAGCACTGCAACAAGAGCAAGTACGGG
CTGCAGGGCTGTGTGTTCACCCGTGACATCAACGCCGCCATCCGCATCAGTGACGCAATG
GAGACCGGCACCGTGCAGGTCAACTCGGCGCCGGCTCGCGGCCCCGACCACTTCCCTTTC
CAGGGATTCCGCGACAGTGGCATTGGCAGCCAGGGCATCCGCAACTCGCTGGCGATGATG
ATTAAGACCAAGTCCACTGTGATCAACCTGGACAAGGAGTCCTACACGCTGGGCTAA

Peptide Sequence

PEP ID

Cre12.g556600.t1.2
PEP Infomation

pacid=30792763 transcript=Cre12.g556600.t1.2 locus=Cre12.g556600 ID=Cre12.g556600.t1.2.v5.5 annot-version=v5.6
Sequence

MSAQEFYAPILASTGVYKFYIDGQWKESVSGKSVAISNPSTRQTAYQVQACTQDEVNKMF
ESAKVAQKAWARTPLYKRAEVLHKVASLMRQYAQPIADCLVKEVAKPSKDSLTEVVRSAD
LIDYTAEEGVRYLGEGQLLNSDSFPGNARNKLCLVSKVPLGVVLAIPPFNYPVNLAVSKL
APALMAGNAVVLKPPTQGAVAGIHMVQCFHAAGLPAGLLSVATGRGAEIGDFLTTHPDVN
CISFTGGDTGISIAKKAGMVPLQMELGGKDVCIVCEDADLDLAAKHIIKGGFSYSGQRCT
AVKLVLVAAPVADRLVAAVAAGVAKLSVGRPEDDCDITPVVSESSANFIEGLAMDAKAKG
ATFVTGEWRREGNLIWPVLLDHVTADMRLAWEEPFGPVLPVMRVSSVEAAVEHCNKSKYG
LQGCVFTRDINAAIRISDAMETGTVQVNSAPARGPDHFPFQGFRDSGIGSQGIRNSLAMM
IKTKSTVINLDKESYTLG*

Transcript Sequence

Transcript ID

Cre12.g556600.t1.2
Transcript Infomation

pacid=30792763 locus=Cre12.g556600 annot-version=v5.6
Sequence

AAACAACAACGTGTTTCACCTGCAATACGACCACGAACCTGGCAGCGTCACTACTCTTCA
CTACACTTCGGCGCAGCTTTTCCACGATGTCTGCCCAAGAATTCTACGCACCAATCCTAG
CATCGACTGGTGTCTACAAATTCTACATTGACGGTCAGTGGAAGGAGAGCGTATCCGGGA
AGTCGGTTGCCATCTCGAACCCTTCCACGCGCCAGACAGCGTACCAGGTCCAGGCCTGCA
CACAAGATGAGGTGAACAAGATGTTTGAGTCGGCAAAGGTGGCCCAGAAGGCTTGGGCGC
GGACTCCGCTGTACAAGCGCGCGGAGGTGCTGCACAAGGTGGCCTCGCTGATGCGCCAGT
ACGCGCAGCCCATCGCGGACTGCCTGGTCAAGGAGGTGGCCAAGCCGAGCAAGGACTCCC
TGACGGAAGTGGTGCGCTCCGCAGACCTGATCGACTACACGGCGGAGGAGGGCGTGCGCT
ACCTGGGCGAGGGGCAGCTGCTCAACTCCGACAGCTTCCCGGGCAACGCCCGCAACAAGC
TGTGCCTGGTGTCCAAGGTGCCGCTGGGTGTGGTTCTGGCCATCCCGCCCTTCAACTACC
CGGTCAACCTGGCGGTCTCCAAGCTGGCCCCGGCGCTGATGGCGGGCAACGCGGTGGTGC
TCAAGCCGCCCACACAGGGCGCCGTGGCGGGCATCCACATGGTGCAGTGCTTCCATGCTG
CGGGCTTGCCCGCCGGCCTGCTGTCAGTGGCCACCGGTCGCGGCGCCGAGATTGGCGACT
TCCTGACAACCCACCCCGACGTCAACTGCATCTCGTTCACCGGCGGAGACACGGGCATCT
CCATCGCCAAGAAGGCCGGCATGGTGCCGCTGCAGATGGAGCTGGGCGGCAAGGACGTGT
GCATCGTGTGCGAGGACGCCGACCTGGACCTGGCGGCAAAGCACATCATCAAGGGCGGCT
TCAGCTACAGCGGCCAGCGCTGCACCGCCGTCAAGCTGGTGCTGGTGGCGGCGCCCGTGG
CGGACCGACTGGTGGCGGCGGTGGCGGCGGGCGTGGCCAAGCTGAGTGTGGGGCGGCCGG
AGGACGACTGTGACATTACGCCGGTGGTGTCGGAGAGCTCGGCCAACTTCATCGAGGGGC
TGGCGATGGACGCCAAAGCCAAGGGCGCCACCTTTGTGACGGGCGAGTGGCGGCGCGAGG
GCAACCTGATCTGGCCGGTGCTGCTGGACCACGTGACGGCCGACATGCGGCTGGCGTGGG
AGGAGCCGTTCGGGCCGGTGCTGCCGGTGATGCGTGTGAGCAGCGTGGAGGCGGCGGTGG
AGCACTGCAACAAGAGCAAGTACGGGCTGCAGGGCTGTGTGTTCACCCGTGACATCAACG
CCGCCATCCGCATCAGTGACGCAATGGAGACCGGCACCGTGCAGGTCAACTCGGCGCCGG
CTCGCGGCCCCGACCACTTCCCTTTCCAGGGATTCCGCGACAGTGGCATTGGCAGCCAGG
GCATCCGCAACTCGCTGGCGATGATGATTAAGACCAAGTCCACTGTGATCAACCTGGACA
AGGAGTCCTACACGCTGGGCTAAAATGTCTGTGCTGAAAAACCGCTGATAAGCCGATGAT
ACGGTAACCGGATTTGTCTTTGCCGGGCCTCGCCACCTGACTCCTGAGGAGCGGCGCGAG
GCGCAGCGAGAGGAGCAGAGAGAGGAGCGAGGGTGAGGAGATGAGAGCTGGGGAGGAGTG
TGCGGGTGCTCGGGGGCCGCCGCGACGGCGACACGCGTGTGTGTGTTTGTGTGTAGTGTG
CACCCAGCTGCTCTTGATGACAGAGAGGAAAGGATGACAAACTGCCCTATCACTGGATTC
GACTGGATTCGGAGGCGACATAGCACTAGGATTGCCTTTAATATAGAGCGGGTTGGCTCA
TGACGGTTTTCAGGGCTCCGTGCGTGAGAGATTCACTCGGGGCGGACAAGAGCCAACCGA
GTTGTCACTAGATTAGATTCATTCGTTAGGTCGAGTGCGGGAAGCGTGGACTGTGAAGGT
AGGCATGGCAGAGGCATGACCAGCCGTATGGCCGAGTGTGTGTGGGGGGGAGGGAGGGGG
CTACAGCACGGCCGACTGTGTTCGTGCTGTTCGGGTAATGAGCTTTGTCCATGGGATGGG
ATGTCCAGAGCGCTTGGGGCGCACAGCCTCGTGACCTGCGGCCCGGGTCCATGAGGTTTT
TGGTGGGCTTGGCTCGAAGCGTGGTGGTTTCTGGGTTTGCTGGGCTGTCACCACGGGCGT
CAATTGAAGAGCGCGCGTTTGACAAGGAAGGGAAGGGAAATGCCGAACCCGTGAGATCGA
CGTTGTGGTTGTGCGGTGCTATGCGGCGCGTTGGTATGCCCGCGGTGCCATCCGTCACTT
GCGCGTACAAACGTTTGTTTTGACTGAGTGGGGGATAAGAAATGAGAAGAACGATGTATT
GATAGGGCGGCCCAAAGGAGCAGAAGGAAGGTGGCGGGATACAGATGTGTCTCATGGCTT
TGCCAGGCTGGCCAACCAGCCGAGGCGAGGGGAACTTGAGGGGCCAGGTGTTGCAGACGC
CACCAGCGCGGCACTTAACGCGTCCGGATTTTGGTGTGGTACCGGGATGGCAAGGAAGAG
GGGCACGGGGAGGGGCCCAGACCATTGAGGCAAAGGCCGCGCGGGTGGAGCCGTGGAGGC
CTCATGGCTGTAATCAGCTCCTGCA