Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g556250.t1.2
CDS Infomation

pacid=30793455 polypeptide=Cre12.g556250.t1.2 locus=Cre12.g556250 ID=Cre12.g556250.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCCAGCACCTATCAGAAGTTTGCTGCCAGCCTTCGCGAGCAGGAGGGCCCGTCTGGG
AGCCTCCCCACCAACGGCCCCTCGACCACCACGCCTTTCGCCAACGCCACGAACCGCTAC
CTGAACAACCACTCCGGTCCCAACGACTTCGCCATGGCGGCCCCCGCCACCGAGGAGAAG
TTCGCGGGCGTGCCCCGCACCGGCACCATGCCGGAGCGCCGCCTGAGCATCAGCTCCAAC
TACAGCCGCGCCAGTGAGATGGTGTTCGGCAAGGACGCGCTGCTGGGCCCGCGCCGCCCG
CGGCCGCACAAGATCTGGAAGAAGAAGTACATCAAGCTGATCGTCGTGGGCGACTCGGGT
CTGGGCAAGACCACCCTCATCAAGTCGCTCATCTCCATCCCCGGCGAGCGCCTGCAGGTG
CACGACGGCAGCTACACGCCCACGGAGCAGTTCCGCCGCGACCCCGAGTCGCTGAGCTCC
ACGGTGTCTTGGCGCGACGAGGAGGACCGCGTCATCTGGGTCTACAAGATCCAGGACACG
CCCGGCTACGGCGACGAGCTGGACGTGTTCCGCAACCTCAAGATGGTGCAGGACTACATC
GAGAGCCAGAACCGCAAGTGGCTGGAGCTGGAGCAGGCTCGCGACCGCAAGGAGGACCTG
GCGGAGATTGAGGACCCGCGCGTTGACCTCTGCATCTTCTGCATCCCGCCGCACCGCCTG
CGCCCCATCGACCTCAAGTACATGTTCGAGCTGGGCAAGCACGTGCCGGTGGTGCCGGTG
GTCACCAAGGCCGACACCATGACGATACGTGAGGCCAACACCTACCGCACCGAGGTCGCC
AACCGCATCGCCAACCCCATGGTGCCCGGCATTCACGACAAGATCAACATCTTCAAGTTC
GAGCGCGACACGCTGGAGCGCGCCGGCGTGCAGGACCACGCCACGCCGCACCCGCCCTTC
CTGGTGATTGCCTCCAACGACATCAGCGAAGAGCTGGCGGCCGCGGAGCCGCCGCTGTTC
TGGCCGGAGCGGCGCTACCCCTGGGGCACCGCGGAGGCCTTCAACAAGGAGCACTCCGAC
CTGCTGGCTGTCCGGGCGCTGCTGATGAAGGAGGCGCTGGAGGAGATCAGCAAGACCAAG
CGCGCCCGCTACGAGGCGTGGCGCCGCACCACCCTGGGCGGCCTCAAGCTGGGCCGCCGC
ATCACGGGCGCGCTCATGTGGACCATCATCCCCGCCATCGTGTGCCTGCAGGTGGGCCGC
GCGGGCGTGCGCATGGAGGACGTGCGGCGCTTCATTGGCAACAACGTGGACCGCATCAAG
CGCCGCCTGCCCAAGAAGGCGGAGGCCAAGCCCGCGCCCGCCCCCGTGGAGGAGCCCAAG
CCCGCGCCCGCCCCCGCGCCGGCACCGCCGCCGCCCGCGCCCGCCAAGAAGGGCTGGGGC
TTCTAA

Peptide Sequence

PEP ID

Cre12.g556250.t1.2
PEP Infomation

pacid=30793455 transcript=Cre12.g556250.t1.2 locus=Cre12.g556250 ID=Cre12.g556250.t1.2.v5.5 annot-version=v5.6
Sequence

MSSTYQKFAASLREQEGPSGSLPTNGPSTTTPFANATNRYLNNHSGPNDFAMAAPATEEK
FAGVPRTGTMPERRLSISSNYSRASEMVFGKDALLGPRRPRPHKIWKKKYIKLIVVGDSG
LGKTTLIKSLISIPGERLQVHDGSYTPTEQFRRDPESLSSTVSWRDEEDRVIWVYKIQDT
PGYGDELDVFRNLKMVQDYIESQNRKWLELEQARDRKEDLAEIEDPRVDLCIFCIPPHRL
RPIDLKYMFELGKHVPVVPVVTKADTMTIREANTYRTEVANRIANPMVPGIHDKINIFKF
ERDTLERAGVQDHATPHPPFLVIASNDISEELAAAEPPLFWPERRYPWGTAEAFNKEHSD
LLAVRALLMKEALEEISKTKRARYEAWRRTTLGGLKLGRRITGALMWTIIPAIVCLQVGR
AGVRMEDVRRFIGNNVDRIKRRLPKKAEAKPAPAPVEEPKPAPAPAPAPPPPAPAKKGWG
F*

Transcript Sequence

Transcript ID

Cre12.g556250.t1.2
Transcript Infomation

pacid=30793455 locus=Cre12.g556250 annot-version=v5.6
Sequence

ATGTGCTGTTGTGAGCATACGGCCGCGCGTGACACCGCACGTATAAACTGCATGCAACTG
TTGCAGAACGAGCTGCTTCAATCAGGTTCATCTCGCTGGGTGACGCAGTGAACACCGCTG
AGTGATGTCCAGCACCTATCAGAAGTTTGCTGCCAGCCTTCGCGAGCAGGAGGGCCCGTC
TGGGAGCCTCCCCACCAACGGCCCCTCGACCACCACGCCTTTCGCCAACGCCACGAACCG
CTACCTGAACAACCACTCCGGTCCCAACGACTTCGCCATGGCGGCCCCCGCCACCGAGGA
GAAGTTCGCGGGCGTGCCCCGCACCGGCACCATGCCGGAGCGCCGCCTGAGCATCAGCTC
CAACTACAGCCGCGCCAGTGAGATGGTGTTCGGCAAGGACGCGCTGCTgggcccgcgccg
cccgcggccgcACAAGATCTGGAAGAAGAAGTACATCAAGCTGATCGTCGTGGGCGACTC
GGGTCTGGGCAAGACCACCCTCATCAAGTCGCTCATCTCCATCCCCGGCGAGCGCCTGCA
GGTGCACGACGGCAGCTACACGCCCACGGAGCAGTTCCGCCGCGACCCCGAGTCGCTGAG
CTCCACGGTGTCTTGGCGCGACGAGGAGGACCGCGTCATCTGGGTCTACAAGATCCAGGA
CACGCCCGGCTACGGCGACGAGCTGGACGTGTTCCGCAACCTCAAGATGGTGCAGGACTA
CATCGAGAGCCAGAACCGCAAGTGGCTGGAGCTGGAGCAGGCTCGCGACCGCAAGGAGGA
CCTGGCGGAGATTGAGGACCCGCGCGTTGACCTCTGCATCTTCTGCATCCCGCCGCACCG
CCTGCGCCCCATCGACCTCAAGTACATGTTCGAGCTGGGCAAGCACGTGCCGGTGGTGCC
GGTGGTCACCAAGGCCGACACCATGACGATACGTGAGGCCAACACCTACCGCACCGAGGT
CGCCAACCGCATCGCCAACCCCATGGTGCCCGGCATTCACGACAAGATCAACATCTTCAA
GTTCGAGCGCGACACGCTGGAGCGCGCCGGCGTGCAGGACCACGCCACGCCGCACCCGCC
CTTCCTGGTGATTGCCTCCAACGACATCAGCGAAGAGCTGGCGGCCGCGGAGCCGCCGCT
GTTCTGGCCGGAGCGGCGCTACCCCTGGGGCACCGCGGAGGCCTTCAACAAGGAGCACTC
CGACCTGCTGGCTGTCCGGGCGCTGCTGATGAAGGAGGCGCTGGAGGAGATCAGCAAGAC
CAAGCGCGCCCGCTACGAGGCGTGGCGCCGCACCACCCTGGGCGGCCTCAAGCTGGGCCG
CCGCATCACGGGCGCGCTCATGTGGACCATCATCCCCGCCATCGTGTGCCTGCAGGTGGG
CCGCGCGGGCGTGCGCATGGAGGACGTGCGGCGCTTCATTGGCAACAACGTGGACCGCAT
CAAGCGCCGCCTGCCCAAGAAGGCGGAGGCCAAGcccgcgcccgcccccgtggaggagcc
caagcccgcgcccgcccccgcgccggcaccgccgccgcccgcgcccGCCAAGAAGGGCTG
GGGCTTCTAAACCCCATGGAGCGGCTGGAGCATAAGCGAAGCGAGGCTGCTAAAGCTGCA
CACCCTACATGAGGGTCGTTGCTGGTTAGGCGGCGGTTCACTTTTATGCATCTCGTGTGA
AGGTACATGTGTGAGGGCTGGGTGACAGCGAGCAGGCGCGCCAGGGCAGTGCGTGGTTCA
GCCTGCGCCTGGCGCGGCCTAATCCGGTTTTGGCTGTGCGTGTGTGGATTGTCCGCCTGG
CCGCGGTGAGGAGAGACCTTCTCCCTCCCCCCTAGGCGTTGTATGGTCATGGACAGTGAG
TTAGGCAGGACTATAGGAAGGATCAGATGCAGGAAGACGAGCTAATGCAGGAGTAGTGCA
ACAGTGCCGCCAATCCATCGACGCCATGACACGTGCACATGCGGGTAGAGCGCGCAAAAG
GACCAAGGAGGCCGGACTTGAGTTCTATGAGGCTACTTTTTAGCAGGACAAGAAGAGTTA
CAGCAGGTGTGTTACAAAATTTGAGGAGCTGCGGCTTGAAGGGAGGAGCAAATGAGGGAG
TTGATTGGTAGGCCCCGCATCCCCGCCTAGTGCGGCACACGTTAGCCAAGGGGAACCCAG
CCGCGGCTTGTCTGAAGTCATGGTCTATGCATCGCCCTTCGAGGGGGCAGTGCCGCTGTA
GTGTTATCAATACCATTGCTCGCATGCTTGTGTCCATGCGCAGTATGAAACCTCTCTGCG
AC