Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g553250.t1.2
CDS Infomation

pacid=30791938 polypeptide=Cre12.g553250.t1.2 locus=Cre12.g553250 ID=Cre12.g553250.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTTGCTGCAGCGCCATGCGCCAGGCTTCACCAAGGTTCCGTCTCGGCAGTGCAAACCG
AGCGTACCGATTGCAAGGCAACCGCGCAGCAGCGTGTGTGCTCGCGCCACTCCCGGAGCA
GATCTGACCACGAACTATGTTATCGAGCCAGTCAGCTTTGGTGAGGATGCCGTTTTGGAA
TGCCCGGAGATGCGGTCGAAGCTGGTGGTCAGGCCCAGCCCCTTTGTCACTCACAACAAC
TTCGGTGGCGGCTTCGTGTCTGACCAGGACCGTGTGGCGTTGAACTCCATGCGCTTTGCC
TCCCCCGACTCCGCGGGCGCCAGCCGCTCCAACTTCTTCCCGCACGGCGGCAAGGGCGGC
ATCAACGTGCTGGAGGCGTCCATGGACCAGCTGAACATGACGCTGCCGCCCTGGGCCATC
CGCGCGGGGGCGAGGCGGGAGATCTACTTCGACCCCTCGCAGACCACCGCCGCCATCGTC
ACGTGCGGCGGCCTGTGCCCCGGCCTCAATGACGTCGTACAGGGCCTGGTGAACAAGCTG
ACTGACTACGGCGTGCCCGAGGGCAAGATCCTGGGCATCAAGTACGGATTCAGGGGCTTC
TACGACCCGCAGGTAAAGCCCATCGTGCTGAGCAAGCGCGTGGTGGACGGCATCCAGCTG
CAGGGCGGGACCATCCTGGGCACCAGCCGCGGAGGAGCCAACATCAGGGAGATCGTGAAG
CGCATTGACATGTGGGGCATTGACATGCTCTTTGTGGTGGGCGGCAACGGTGGCAACGCG
GGCGCCAACGCCATCAACGCTATGTGCCGGCAGCACGACGTGCCCTGCTCCGTGGTGGGC
GTGCCCAAGTCCATCGACAACGACATCCTGCTCATCGACAAGTGCTTTGGCTTCGACACG
GCGGTGGAGGAGAGCCAGCGCGCGCTCATGGCGGCAAAGGTTGAGGCCAGCAGCGCGCGC
AAGGGCATCGGCCTGGTCAAGCTGATGGGCCGCCAGTCGGGATTCATCGCCATGCAGGCC
TCCATGGCCAGCGGTGTGGTGGACGCCTGCCTCATCCCCGAGGTCAACTTCAAGCTGGAC
GGCGACAACGGGCTGCTCAAGTACCTGGACGGCGTCATCAAGGCCAAGGGGCACGCGGTG
GTGTGCGTGGCGGAGGGCGCGGGGCAGGACATTCTGGAGGACGGCGGCCAGATCGGCACC
GACGCCAGCGGCAACCCCATCCTCAAGGACATCGGCGCCTTCCTCAAGGACAAGTTCAAG
GCCTACTTCAAGGACGCAGACATCAAGTACATCGACCCCTCCTACATGATCCGCTCCGTG
TCCACCACCACCAACGACCGCATCTACTGCAAGATCCTGGCGCACAACGCCGTGCACGCC
GCCTTCGCCGGCTTCACCGGCATCACCGTGGGCCTGGTCAACACGCACTACGTCTACCTG
CCCATCCCGGTCATCATCCAGGCGCCGCGCAAGGTGGACCCGCGCGGCAAGGCCTGGAAC
CGCCTGCGTGCCGCCATCGGCCAGCCCAGCTTCCAGTAA

Peptide Sequence

PEP ID

Cre12.g553250.t1.2
PEP Infomation

pacid=30791938 transcript=Cre12.g553250.t1.2 locus=Cre12.g553250 ID=Cre12.g553250.t1.2.v5.5 annot-version=v5.6
Sequence

MLLQRHAPGFTKVPSRQCKPSVPIARQPRSSVCARATPGADLTTNYVIEPVSFGEDAVLE
CPEMRSKLVVRPSPFVTHNNFGGGFVSDQDRVALNSMRFASPDSAGASRSNFFPHGGKGG
INVLEASMDQLNMTLPPWAIRAGARREIYFDPSQTTAAIVTCGGLCPGLNDVVQGLVNKL
TDYGVPEGKILGIKYGFRGFYDPQVKPIVLSKRVVDGIQLQGGTILGTSRGGANIREIVK
RIDMWGIDMLFVVGGNGGNAGANAINAMCRQHDVPCSVVGVPKSIDNDILLIDKCFGFDT
AVEESQRALMAAKVEASSARKGIGLVKLMGRQSGFIAMQASMASGVVDACLIPEVNFKLD
GDNGLLKYLDGVIKAKGHAVVCVAEGAGQDILEDGGQIGTDASGNPILKDIGAFLKDKFK
AYFKDADIKYIDPSYMIRSVSTTTNDRIYCKILAHNAVHAAFAGFTGITVGLVNTHYVYL
PIPVIIQAPRKVDPRGKAWNRLRAAIGQPSFQ*

Transcript Sequence

Transcript ID

Cre12.g553250.t1.2
Transcript Infomation

pacid=30791938 locus=Cre12.g553250 annot-version=v5.6
Sequence

ATTATCTGAAAGGCGGAGTTCTGTGTAACTCGCATTGTATTATCGACTGACTCTTATCAT
CTCAGGCATAAAAGCCCAAGCTCTAGCACGCACGTTCTGACCGGCTGCCTTCGCTTCTGT
CTTTGGGCCAAATTGGACTTGCGGGGGTTCAAGTCACACGTGTTGGTAACATGTTGCTGC
AGCGCCATGCGCCAGGCTTCACCAAGGTTCCGTCTCGGCAGTGCAAACCGAGCGTACCGA
TTGCAAGGCAACCGCGCAGCAGCGTGTGTGCTCGCGCCACTCCCGGAGCAGATCTGACCA
CGAACTATGTTATCGAGCCAGTCAGCTTTGGTGAGGATGCCGTTTTGGAATGCCCGGAGA
TGCGGTCGAAGCTGGTGGTCAGGCCCAGCCCCTTTGTCACTCACAACAACTTCGGTGGCG
GCTTCGTGTCTGACCAGGACCGTGTGGCGTTGAACTCCATGCGCTTTGCCTCCCCCGACT
CCGCGGGCGCCAGCCGCTCCAACTTCTTCCCGCACGGCGGCAAGGGCGGCATCAACGTGC
TGGAGGCGTCCATGGACCAGCTGAACATGACGCTGCCGCCCTGGGCCATCCGCGCGGGGG
CGAGGCGGGAGATCTACTTCGACCCCTCGCAGACCACCGCCGCCATCGTCACGTGCGGCG
GCCTGTGCCCCGGCCTCAATGACGTCGTACAGGGCCTGGTGAACAAGCTGACTGACTACG
GCGTGCCCGAGGGCAAGATCCTGGGCATCAAGTACGGATTCAGGGGCTTCTACGACCCGC
AGGTAAAGCCCATCGTGCTGAGCAAGCGCGTGGTGGACGGCATCCAGCTGCAGGGCGGGA
CCATCCTGGGCACCAGCCGCGGAGGAGCCAACATCAGGGAGATCGTGAAGCGCATTGACA
TGTGGGGCATTGACATGCTCTTTGTGGTGGGCGGCAACGGTGGCAACGCGGGCGCCAACG
CCATCAACGCTATGTGCCGGCAGCACGACGTGCCCTGCTCCGTGGTGGGCGTGCCCAAGT
CCATCGACAACGACATCCTGCTCATCGACAAGTGCTTTGGCTTCGACACGGCGGTGGAGG
AGAGCCAGCGCGCGCTCATGGCGGCAAAGGTTGAGGCCAGCAGCGCGCGCAAGGGCATCG
GCCTGGTCAAGCTGATGGGCCGCCAGTCGGGATTCATCGCCATGCAGGCCTCCATGGCCA
GCGGTGTGGTGGACGCCTGCCTCATCCCCGAGGTCAACTTCAAGCTGGACGGCGACAACG
GGCTGCTCAAGTACCTGGACGGCGTCATCAAGGCCAAGGGGCACgcggtggtgtgcgtgg
cggagggcgcggggcagGACATTCTGGAGGACGGCGGCCAGATCGGCACCGACGCCAGCG
GCAACCCCATCCTCAAGGACATCGGCGCCTTCCTCAAGGACAAGTTCAAGGCCTACTTCA
AGGACGCAGACATCAAGTACATCGACCCCTCCTACATGATCCGCTCCGTGTCCACCACCA
CCAACGACCGCATCTACTGCAAGATCCTGGCGCACAACGCCGTGCACGCCGCCTTCGCCG
GCTTCACCGGCATCACCGTGGGCCTGGTCAACACGCACTACGTCTACCTGCCCATCCCGG
TCATCATCCAGGCGCCGCGCAAGGTGGACCCGCGCGGCAAGGCCTGGAACCGCCTGCGTG
CCGCCATCGGCCAGCCCAGCTTCCAGTAAGGAGGAGGGACTGACGGCGCTGGGCAGAGGA
TGGAATGGCGAGGAAGAGGAATGGCTAGGACGAGAGGTTGAGGGGCGGCGAGAAGGTGCC
GGAGGCAGGTGCAAGCAGGAGCACGCTCGCATGAGCGGGCGTGGAGGCAGCAGTACGGAG
GCGGGGGAGATTGGCAGTACTTTGTGCATCCAGAGGAGGGTTTTGTGCACCAGGGCATCA
CGGGGCAAGCATGCGCGTCCGTGGGGCCAGTGTGTGACTGGGCGAGTGCCACAGCTTGAG
GCCGCATTCGACATTGATGTGCCTAGACAGGTAGCTTGGGTTTGCACGCCGCGCCGCGCG
AAACACGTATCATCACGAGGCAATGCAGCTGAGACCAATACATGCACGTGCACGTGCACT
GCGCCTGCGCGTGCTTCTTCTTACCTAGCTGATTGGGAGGCGTCTCCGTCGTGTGTCACA
GGGCTGCCCGATATTATTCTTTGAGCATGAGTGTGTTTGCGGGGTGTGTAGGCACTAGGC
AGTGCGTCCATGCATGGCGGGCGTGGGGCGGGCATTCCTTCCCACTGCTGCCTGCGGGTA
ATGTACAACGTGTGAGCGGCACGTGACGGCTCACGGTGTTGGTGCACGGAGAGGGCTGGC
CAGCTGGACGGCCCCGGCAACGAACACCGCTGTGTGACTCTGTGTGAGGGATCAGGCGTG
TAACGTACAAGAGCTGT