Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g552400.t1.1
CDS Infomation

pacid=30793216 polypeptide=Cre12.g552400.t1.1 locus=Cre12.g552400 ID=Cre12.g552400.t1.1.v5.5 annot-version=v5.6
Sequence

ATGGCCTTCTCGACGTTTGTACTGTTCGCATGCGGGGTCGCTGCTTCTTCAAGGGCGACC
TCGGTCAGCACCGATACATCCATATTAATAAGCTCGGATTCTAGGCATGTGCCCTGGCTG
CAGCCTTCCTCTTGGCAGCCGGCCCATTCGGGGGTCACGGAACTCGATGCCCTGCTGAAA
TTGCGCGCGTCACCCTCGCGCTGGGTGACGGTGTACCTCTTGGCCCTGCCCACCAATGCT
ACCGCCCTAGACTCGGCGGAAACTCGGGCCTTCCTACGACTTGCGCTCAACACCTTCCTG
ACGTACAGGGTGTATGGGCACGCGGACCACGACATCGTGGCCTGCATGAACGCACCCGCC
CTGGACTGGTGCCGCCGCTACCGGCTGCCCTGCGCCGACGCCTCCACCTACGCGGCCGAC
GCCGCAAACCTGAAGCGCATCGGCTGGGCCAAGTTCAAAATGATGCGTGACATCCTCAAA
AAGGGCTACCACGTGCATCTGTCAGACCTGGATGTGTCGTACCTCAAGCCCCTGGCGCCG
GCGGTGGAGGAGGTGTTCAGCTGGAGCAACGGCGCCGCTGACGGCAGCATGATGCAGGAG
GAGTGGGTGCACCAGGACGACGCCGACAACACCGCCACGCGGCGGCCCATCTACCTGGCT
AACACGGGGGTGGTGTGGCTGCGGGCCAATGAGCGCGGCGTCAAGCTCATGGAGTCGCTG
TTGAAGTGGGAGGGAGACAGCTACCAGGATCAGTACATCGCGACGCACGTGGCGTACGAG
TCCTGGGCGCCCTGCCAGGAGGAGGCGACCTGCCTAGTGGTGCGCGGCCGCGGCATGGCT
GCCATCACGCGCCACCCGGCCCAGTTCGCACACAGCAACTGTGAGCCGGAGCCGCACTAC
GCCCACTGCGCCTCACGGCGGCTGTACGTGCACGCCATATGCCGCGGGCAGAACACGGAC
AAGGAGGCTTTCCTGAGGAGCGTCAAAGCCATGTTCATATTGCCGCCGCCGGTCGGAGCC
AGGAGCGGAGGCGGCAGCGGCCGATTGCAGGATGACGTGGCCGTGTTCGGACAGCAGGAC
ATGGCCGTGGCGGCCGCCGGCGGCCTGCCCTGCCCGGCACACCAGCAACGGGCCTGGTCG
GTTCGCTTCTACCCCGCCTACACGGCCTCGGGTGCCGACGTGGGTGCGGGGACTGCGGGC
GCATCCACTGCGGACGCTACAGGTCCCGGCCCGACAACGACGGCTGCTGGCGGCGCCGGC
GGCGCGCAAACGGGATCTGGGTCGGCGGCGGAAATGCAGACAAGTCAGGAGGCGGTGGCC
GCGCATATGAGTGCCGAGTCTGACAAAGTGCGGGCGCAGGCGCTGCAAGAGCGCACCAGC
AGCAGCAAGCCCGGTCACAGCCGCAAGGCGCACCAGCGCCCGCATCGCCACCTGATGCGG
CTGCGGAGCTAA

Peptide Sequence

PEP ID

Cre12.g552400.t1.1
PEP Infomation

pacid=30793216 transcript=Cre12.g552400.t1.1 locus=Cre12.g552400 ID=Cre12.g552400.t1.1.v5.5 annot-version=v5.6
Sequence

MAFSTFVLFACGVAASSRATSVSTDTSILISSDSRHVPWLQPSSWQPAHSGVTELDALLK
LRASPSRWVTVYLLALPTNATALDSAETRAFLRLALNTFLTYRVYGHADHDIVACMNAPA
LDWCRRYRLPCADASTYAADAANLKRIGWAKFKMMRDILKKGYHVHLSDLDVSYLKPLAP
AVEEVFSWSNGAADGSMMQEEWVHQDDADNTATRRPIYLANTGVVWLRANERGVKLMESL
LKWEGDSYQDQYIATHVAYESWAPCQEEATCLVVRGRGMAAITRHPAQFAHSNCEPEPHY
AHCASRRLYVHAICRGQNTDKEAFLRSVKAMFILPPPVGARSGGGSGRLQDDVAVFGQQD
MAVAAAGGLPCPAHQQRAWSVRFYPAYTASGADVGAGTAGASTADATGPGPTTTAAGGAG
GAQTGSGSAAEMQTSQEAVAAHMSAESDKVRAQALQERTSSSKPGHSRKAHQRPHRHLMR
LRS*

Transcript Sequence

Transcript ID

Cre12.g552400.t1.1
Transcript Infomation

pacid=30793216 locus=Cre12.g552400 annot-version=v5.6
Sequence

GAAACTTCTTGTTCATAGATTGCTTCACCTATCATGGCCCGAATGGCCTTCTCGACGTTT
GTACTGTTCGCATGCGGGGTCGCTGCTTCTTCAAGGGCGACCTCGGTCAGCACCGATACA
TCCATATTAATAAGCTCGGATTCTAGGCATGTGCCCTGGCTGCAGCCTTCCTCTTGGCAG
CCGGCCCATTCGGGGGTCACGGAACTCGATGCCCTGCTGAAATTGCGCGCGTCACCCTCG
CGCTGGGTGACGGTGTACCTCTTGGCCCTGCCCACCAATGCTACCGCCCTAGACTCGGCG
GAAACTCGGGCCTTCCTACGACTTGCGCTCAACACCTTCCTGACGTACAGGGTGTATGGG
CACGCGGACCACGACATCGTGGCCTGCATGAACGCACCCGCCCTGGACTGGTGCCGCCGC
TACCGGCTGCCCTGCGCCGACGCCTCCACCTACGCGGCCGACGCCGCAAACCTGAAGCGC
ATCGGCTGGGCCAAGTTCAAAATGATGCGTGACATCCTCAAAAAGGGCTACCACGTGCAT
CTGTCAGACCTGGATGTGTCGTACCTCAAGCCCCTGGCGCCGGCGGTGGAGGAGGTGTTC
AGCTGGAGCAACGGCGCCGCTGACGGCAGCATGATGCAGGAGGAGTGGGTGCACCAGGAC
GACGCCGACAACACCGCCACGCGGCGGCCCATCTACCTGGCTAACACGGGGGTGGTGTGG
CTGCGGGCCAATGAGCGCGGCGTCAAGCTCATGGAGTCGCTGTTGAAGTGGGAGGGAGAC
AGCTACCAGGATCAGTACATCGCGACGCACGTGGCGTACGAGTCCTGGGCGCCCTGCCAG
GAGGAGGCGACCTGCCTAGTGGTGCGCGGCCGCGGCATGGCTGCCATCACGCGCCACCCG
GCCCAGTTCGCACACAGCAACTGTGAGCCGGAGCCGCACTACGCCCACTGCGCCTCACGG
CGGCTGTACGTGCACGCCATATGCCGCGGGCAGAACACGGACAAGGAGGCTTTCCTGAGG
AGCGTCAAAGCCATGTTCATATTGCCGCCGCCGGTCGGAGCCAGGAGCGGAGGCGGCAGC
GGCCGATTGCAGGATGACGTGGCCGTGTTCGGACAGCAGGACATGGCCGTGGCGGCCGCC
GGCGGCCTGCCCTGCCCGGCACACCAGCAACGGGCCTGGTCGGTTCGCTTCTACCCCGCC
TACACGGCCTCGGGTGCCGACGTGGGTGCGGGGACTGCGGGCGCATCCACTGCGGACGCT
ACAGGTCCCGGCCCGACAACGACGGCTGCTGGCGGCGCCGGCGGCGCGCAAACGGGATCT
GGGTCGGCGGCGGAAATGCAGACAAGTCAGGAGGCGGTGGCCGCGCATATGAGTGCCGAG
TCTGACAAAGTGCGGGCGCAGGCGCTGCAAGAGCGCACCAGCAGCAGCAAGCCCGGTCAC
AGCCGCAAGGCGCACCAGCGCCCGCATCGCCACCTGATGCGGCTGCGGAGCTAAGGGCTA
TTTATTTGCAAGCAGCAGCTGTGTTGGCTTGGTGTACATATGGTGCGGTTCCTTTGGCAA
CGTTTGTGCTTTATGGCGCATGCAGCAGTCCAGAGCTTGGGGAAGATGCTTTGAGGAAAC
GAAATGCGCGGGAAGACAGGTGTAGCGCGCTCCATTATTATGTAAGCAATTCGGGGTTGC
GCTCGTACGACGGCACGTTTAGGCCTGTAGGGCGCCGTGCATTCATGCTAGCGACGCATT
CATGCAtttttgggctgagcccccccagcgaagcgttccaggggggggcgaagcccccca
ggaacacccctgtccgtgcgttcgttcgtgcgtgcgtcggcaaaacatagcatactggcg
caaaccgcgagtgctacgtattagtatttgttaatgtctattgcatgtaaataggtggca
gggaaacttcgggcggagcgagaagtgccttcgcggtccatggacaattgactttcgcga
ggtcgcaaggaaagcatccggtgcccgctgatatgcagtctctaaggcaaactatgttgg
cggcaagcaaagcggggaagtatatcgaaagtttaatgagcgacttgccgagccatgccg
acgcgccagaatgccgagaagccccgaggtcgcccccgccccgcgcctagccctttgagc
gtggggcgccggggaggtgttgagtatggcaggaggcgaaagaaatgcttggggtgtttg
ggaacgtggcaaggcacgcatgcgtggcgcgggaaatcccgcacgcccccaacccgagtg
tccctagccgatgcgcctgcgcgtcgtagcggcatggaggctctgacggggcgttacaca
cctattagctcccaagcgtacgggggctcagcccattttccagctgtacaaagctgacac
cccttgttgccttCATGCACGCTTTAGTACGGTAATGTTCATGTGGTATACTCCATTCCG
TGATATTCTTACCAGTTAATGCTGCACCGGCGGCACGTGAGGGTCATGGTGAACCTGATG
GGGCGTTGCTTCATGGCAGTGAGCAGTGACGTTTGCCAATGGGCGCAATGTGGGCCCCGG
GACTTTGCAAGTCAATGCGGAGGAGGATAACGATACTTCCCGGGTGCAGTTAGgaagtct
gtcagcggcgagctgctaccgggcgtccgggaacctagaggcggttgctagcacgagtgg
gacgtcggtgagcggacgctatgtccgtgcgtggcaatcggcagggcgggaggtgtggaa
cgtcgtggtgatggtgacgccccaggaacgcagcgcattgatcagggccgcacgcctggt
ccgcagcacaggtgtggtggtggcgccttacctgacgtccgtagggtgtgcactgcgcaa
ggagctttcgaagggtttcgagcagcagggctgaagccccgatggaagggaggggcgggc
attcggtgccaaggcacctaatcacctaggctgacgggctagcagttgacgtagttggca
ttgagtagtacagtcgaacacgcctaacttcgttgcgcaaagtaagtttcccggcgttat
aagggcccaccggcccgggccactggtacttacggggacaggatagcacgcatgctcgtg
cacaccaccttgtaaccaacaacaaca