Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g549800.t1.2
CDS Infomation

pacid=30792221 polypeptide=Cre12.g549800.t1.2 locus=Cre12.g549800 ID=Cre12.g549800.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCGCCTCCTAAACGCTATCCCAAGTCGAACCGGCGCAAGGACGGCCTAAGGCTTGTT
GCTAGAGACCACGCTACTGCGCTGCTGAAGAAGCCGGCTGCCTATTACGACGACAGCCTG
AATGTCACTTGGGGCAGCCAAGACCAGTATGAGGTCATTAAGCAGCTAGGCAAGGGCAAA
TATGGCGAGGTGTATGAGGGTATCAACCTTCGGCTGGCTTCCCGAGACAAGGACCGCGTC
TGCGTCATAAAAGTGATGCGCCCCGTGAAGGAGCACCGGCTGCGGCGCGAGGTGAAGATC
CTGCAGCACGTGAGCGGCGGCCCCAACATCGTGCGGCTGCTGGACATTGTGCGTGACCCG
GACACCAAGACGCCCTCCTTCGTGTTTGACTTCGTGGACGCCATGCCCTTCAAAGAGCTG
CAGGCCGCGGTGACGGACCTGGATGTGCGCTACTACATCTTCCAGCTGCTCATTGCGCTG
GACTACTGCCACTCGCGCGGCATCATGCACAGGGACGTCAAGCCGGGCAATGTGCTGATC
GACCACGCCAAGCGGCAGCTCAAGCTCATCGACTGGGGCCTGGCGGACTTTTACACGCCC
GGCAAGGAGTACCCGGTGCGTGTGGCCACGCGCTTCTACAAGGGGCCGGAGCTGCTGGTG
GACATCAAGGACTACACGTACAGCCTGGACGTGTGGGGTGTGGGCTGCATGCTGGCGGCG
CTGGTGTTCAAGAAGCCCGTGTTCTTCAGGGGCGAGGACGAGTTCGACCAGCTGGTCAAG
GTGGTCCGTGTGCTGGGCACAGACGGGCTGTATGCCTACTGCGACAAGTACGGGGTGGAG
CTGGACCCGCGGCTGGCACAGCTGTGCGGATTCAGGCCGCGTGTGCCGTGGCGCAAGTTC
GTGACGGGCGACAACGGCCACCTGGCCTCGCCCGAGGCCTTTGACCTGCTGGACCGCCTG
CTGCAGTACGACCACCACGAGCGGCTCACATGCCAGGAGGCGCTGCAGCACGGCTACTTT
GACCCGGTGCGCGAGGGCCTGCCCGGCTTCAAGCCGCTGCCCGAGCCCATGGTGACCATG
CTGGCGCAGCTGGAGGCGCGGCGGAGGCAGCAGCAGCAGCAGCAGGCGGGCGCGGCGGGG
GGGAGCGGAGGCGGCGCCGACGGCGGAGAGGCGGGTCCGTCGGGCTCAGGAGGAGGTGGA
GGTGGAGGCAGCGGAGGAGGAGGAGGAGGCGCGGGGCCGGCGGGGCCAGGGCGGCAGCAG
CTGGTGCAGGCGGGCGCGGGGATACAAGAGGAGGCGGAAGCGGAGGAGGGGCCACCGCTT
GGCTTGCGGGGGCCGCCCGCGGCGACACGATCGGCCAAGGAGACAGCGGTGCTGGCCTAG

Peptide Sequence

PEP ID

Cre12.g549800.t1.2
PEP Infomation

pacid=30792221 transcript=Cre12.g549800.t1.2 locus=Cre12.g549800 ID=Cre12.g549800.t1.2.v5.5 annot-version=v5.6
Sequence

MAPPKRYPKSNRRKDGLRLVARDHATALLKKPAAYYDDSLNVTWGSQDQYEVIKQLGKGK
YGEVYEGINLRLASRDKDRVCVIKVMRPVKEHRLRREVKILQHVSGGPNIVRLLDIVRDP
DTKTPSFVFDFVDAMPFKELQAAVTDLDVRYYIFQLLIALDYCHSRGIMHRDVKPGNVLI
DHAKRQLKLIDWGLADFYTPGKEYPVRVATRFYKGPELLVDIKDYTYSLDVWGVGCMLAA
LVFKKPVFFRGEDEFDQLVKVVRVLGTDGLYAYCDKYGVELDPRLAQLCGFRPRVPWRKF
VTGDNGHLASPEAFDLLDRLLQYDHHERLTCQEALQHGYFDPVREGLPGFKPLPEPMVTM
LAQLEARRRQQQQQQAGAAGGSGGGADGGEAGPSGSGGGGGGGSGGGGGGAGPAGPGRQQ
LVQAGAGIQEEAEAEEGPPLGLRGPPAATRSAKETAVLA*

Transcript Sequence

Transcript ID

Cre12.g549800.t1.2
Transcript Infomation

pacid=30792221 locus=Cre12.g549800 annot-version=v5.6
Sequence

TCAGTCTAAGCTCAACACTTAGGTTGCAGCATTATGACGTAGGGAAAGCCTATAGCCTTA
GTGTGCACTGGTCTCTAAAATGGCGCCTCCTAAACGCTATCCCAAGTCGAACCGGCGCAA
GGACGGCCTAAGGCTTGTTGCTAGAGACCACGCTACTGCGCTGCTGAAGAAGCCGGCTGC
CTATTACGACGACAGCCTGAATGTCACTTGGGGCAGCCAAGACCAGTATGAGGTCATTAA
GCAGCTAGGCAAGGGCAAATATGGCGAGGTGTATGAGGGTATCAACCTTCGGCTGGCTTC
CCGAGACAAGGACCGCGTCTGCGTCATAAAAGTGATGCGCCCCGTGAAGGAGCACCGGCT
GCGGCGCGAGGTGAAGATCCTGCAGCACGTGAGCGGCGGCCCCAACATCGTGCGGCTGCT
GGACATTGTGCGTGACCCGGACACCAAGACGCCCTCCTTCGTGTTTGACTTCGTGGACGC
CATGCCCTTCAAAGAGCTGCAGGCCGCGGTGACGGACCTGGATGTGCGCTACTACATCTT
CCAGCTGCTCATTGCGCTGGACTACTGCCACTCGCGCGGCATCATGCACAGGGACGTCAA
GCCGGGCAATGTGCTGATCGACCACGCCAAGCGGCAGCTCAAGCTCATCGACTGGGGCCT
GGCGGACTTTTACACGCCCGGCAAGGAGTACCCGGTGCGTGTGGCCACGCGCTTCTACAA
GGGGCCGGAGCTGCTGGTGGACATCAAGGACTACACGTACAGCCTGGACGTGTGGGGTGT
GGGCTGCATGCTGGCGGCGCTGGTGTTCAAGAAGCCCGTGTTCTTCAGGGGCGAGGACGA
GTTCGACCAGCTGGTCAAGGTGGTCCGTGTGCTGGGCACAGACGGGCTGTATGCCTACTG
CGACAAGTACGGGGTGGAGCTGGACCCGCGGCTGGCACAGCTGTGCGGATTCAGGCCGCG
TGTGCCGTGGCGCAAGTTCGTGACGGGCGACAACGGCCACCTGGCCTCGCCCGAGGCCTT
TGACCTGCTGGACCGCCTGCTGCAGTACGACCACCACGAGCGGCTCACATGCCAGGAGGC
GCTGCAGCACGGCTACTTTGACCCGGTGCGCGAGGGCCTGCCCGGCTTCAAGCCGCTGCC
CGAGCCCATGGTGACCATGCTGGCGCAGCTGGAGGCgcggcggaggcagcagcagcagca
gcaggcgggcgcggcgggggggagcggaggcggcgccgacggcggAGAGGCGGGTCCGTC
GGGCTCaggaggaggtggaggtggaggcagcggaggaggaggaggaggCgcggggccggc
ggggccagggcggcagcagctggtgcaggcgggcgcggggatacaagaggaggcggaagc
ggaggaggggCCACCGCTTGGCTTGCGGGGGCCGCCCGCGGCGACACGATCGGCCAAGGA
GACAGCGGTGCTGGCCTAGGCGCTCGGAAATCAGCTGCAGGCGTGTGGGTGCATAGCTCG
GTGACGAGTGTGGTGGTGCCAGTGACGGCTGCGCGGCAGACGCGCCGGAGGAATGAAGCT
TGGGGGCCGACAGCTCCTGCTGTCGTCCGGTTTGGTTTGCGGCGCGTGTCTGGATGACAA
AAGGGGATGTTGCAACGTCACCCATTCACGGATGAGGACACAAACGATTGACGCGCGTTG
ATGTGTGTGCTTGGCATATGCTTTCTACGCTTCGCCGACCTTACGTGTTGTTTTGGTGGC
GTGCCAAGTGATGCAACTCTAAGTTTGCCTTCGGCAGCTGCTTGTTACCAGGCTGGGAGC
GCTTGTGCGGGTTGCGGCGTGTGCCCCCTGTGCGCGCTTGTGGTTGCGGTATCCTGATAC
TGCTAGGGGTGCTGCATGCAGCTCGCTGAGTGACTGAGCTTGCCGACACCAGGCCTGTTG
CTGCTGCAGTTTGACTTGTTTCATGTGAGATGTGCCCTCTGCAACGAGTCGCGCAGTACG
CTTGCACAGCTGTTGCGAGAATGTCCGTGGCGCGGCTCTTGTGGAAAGTGAGTCGTCTGG
TTGATTGGTAGATTGCGCCTGTTTATGGCCTGAGTGCCTTTAGTAGTTAAGGTGATATAA
ATAGTATCCCGGGTGTTCATGTGGGTGTGGTGCTCTCGTGCTCTGTGACGTCAGTCGGTT
TGTCGTGTTGATGCTCCCATGTGGATTCGTAGTGTCATGGAGTTTTGCGCGTGTTGCCTT
GGCGTTTCGTACAGTTTTGTTTCCGTGCCTACATACCGTACTGTTACAAGTGCAGAGGAC
CTGCATGTTTCTGTGGGGGTGAACCAGGTCTGGTTGATGTGGGATGGGCATGCGGCACGC
GTGGTGTTGTTGCTGCGGGCCTGTTGTTAGAGCTCAGCGCCGCCCACCTAAGAGCTGCCA
ACGCGCACGCGGCGTGTGTTGTACGGGGTCAAGGTGCAGCCATCATGGTCATAGGACCGC
GCTGCGTGACTGTTGGTATGACTGCGGTACCAAGAGCTGGTTAGTTGGGGTGTCGTGTTC
ATGACTTACAGACGCTAACAGGCGTATGGTTGTAGACGGTTGAACTGTATTTGGGGGTTA
CAGCGGAATAAGGCGTGGCAGTGTGAGGCTACTAAGGCCTTACATGGAATAATGGGATGT
CGCCACACTGACCGCAACAAACACGTGCTTTACATACATCGCACGCTCATTGCTCATGGG
GAATGCATGTGTAGACTGTCTTTGCCAGGGGCACCCCTGGTCTTTCATTCAGTCGTTGTA
AGGACA