Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g549000.t1.2
CDS Infomation

pacid=30793308 polypeptide=Cre12.g549000.t1.2 locus=Cre12.g549000 ID=Cre12.g549000.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCGGTCAAGACTTCTATGGGCCTGCGGGCTCGCAGCGCTTCTGGCGCTAGCGGCAATG
CCTGCGGCGCTTGGGCAAAAGATCTTGCCGAAGTTCCCCTACTGCCGCTGCGTGAAGAAG
GGACCCTACGCCCTGGCCAAGAACGTGGACGAGATTGACGGGTACTACTGCTTTGAGATT
GAGCAGGTGCCCTGCGGCAAGGACAAGTGCTGCAAGATGGATTTGCGCAAAGTCGAATTC
GATGCCAACGTTGCGTGCCGCGACACCACCAAGGTCACAGCCATGGTGAACGGCCTGCTG
CCCAAGCAGCAGCCCACCTGGACGGCGCCGCAGGACACGCCCGCCGGCAAGGCCGTGCTC
AAGCTGTCGGGTCTAGGCCTCAACATCACCACCGCCCCCGGCTCGCTGGTGTGCCTGAAG
CTGGACGGCCAGTGCAACACGCTGGAGAAGCTGTGCGCCGTGCCCAAGGGCCAGATGCCC
GGCATCTGCGCCATCAGCATGTTCAACACTAAGGACACGTGCTGCCCCATCTCCCAGACC
GGCTGGCCCTTCCCGCCCCCGCCCCCGCCCCCCAGCCCGCGCCCGTCGCCCCCTCCCCGC
CCCCCTCCGTCCCCCCCGCCGCCCCGCAAGCCCTCGCCGCCCCCCTCTCCCCCTGCCAGC
TGCCCCATCTGCATCACCCTCAACACCACCGACGTGTCCCTGACTCGTGAGGTGTGCGAC
AACCTGGCTGACTACGTCAACTCTGTCTGGGTGGACCGCTCAAACGCCACGCTGCTGCAG
CCCTTCAGCTGCAGCCTGGCCACGCCCTCCCAGGTCAAGATCTGCGCCGTGGCTGAGGGC
AAGCCCGACACGGTGGATTTTGCTGGCATTGCGGAGGACACTTACGAGATCCAGCTGATG
CTGGAGGAGCTGGGCCTCAGCTGCGCCTTCCCCAGCATGATGGGGACCAGCATGGTGTAC
CTCGTGGAGTACGGCACGTGCCGCGCCGTGTTCACCTACGTGCAGGACTGCAAGCAGCCC
GGCCCCCAGCCTTTCCCCTTCTGCGTCTGCAACCGGCGCCCCAAGGCCACGCCCTTTGCG
CTGGACCCTACCATCCGCGTCAAGCCCGGCTCCTCGCCGCGCTCCACCAACTACTGCTGG
ACCGCCACCACCGTCGCGCCCTATGACCCCACCTCGCCCTGCGGCAAGACCAATGAGCTG
TACAAGGCGGAGTTCTACGTGCGCAACAACACGCGCGGCGCCGTCACCGGCCTCACCGCC
GCCGGCAAGTCCTGGTCGCCCGTATGGGACAGCGATGGCAAGGTGTTCCGCCTGACCAAC
CTGATGTGGACCGTGGACTTCGTCAACACCAACAAGCCCCAGATCTGCGTCGAGCTGACG
GGCATCACGCTGGGCCAGTTCTGCGTGACTGCCAATTGCCAATACGCGTTGTTTGACGCG
TCCAAGAGCTGCTGCCCCATGGGCACTGCCTCGCTCGGGTAA

Peptide Sequence

PEP ID

Cre12.g549000.t1.2
PEP Infomation

pacid=30793308 transcript=Cre12.g549000.t1.2 locus=Cre12.g549000 ID=Cre12.g549000.t1.2.v5.5 annot-version=v5.6
Sequence

MRSRLLWACGLAALLALAAMPAALGQKILPKFPYCRCVKKGPYALAKNVDEIDGYYCFEI
EQVPCGKDKCCKMDLRKVEFDANVACRDTTKVTAMVNGLLPKQQPTWTAPQDTPAGKAVL
KLSGLGLNITTAPGSLVCLKLDGQCNTLEKLCAVPKGQMPGICAISMFNTKDTCCPISQT
GWPFPPPPPPPSPRPSPPPRPPPSPPPPRKPSPPPSPPASCPICITLNTTDVSLTREVCD
NLADYVNSVWVDRSNATLLQPFSCSLATPSQVKICAVAEGKPDTVDFAGIAEDTYEIQLM
LEELGLSCAFPSMMGTSMVYLVEYGTCRAVFTYVQDCKQPGPQPFPFCVCNRRPKATPFA
LDPTIRVKPGSSPRSTNYCWTATTVAPYDPTSPCGKTNELYKAEFYVRNNTRGAVTGLTA
AGKSWSPVWDSDGKVFRLTNLMWTVDFVNTNKPQICVELTGITLGQFCVTANCQYALFDA
SKSCCPMGTASLG*

Transcript Sequence

Transcript ID

Cre12.g549000.t1.2
Transcript Infomation

pacid=30793308 locus=Cre12.g549000 annot-version=v5.6
Sequence

ATACAGAACTAGTAGTCCATAGTTTACAGGTCGCTCCACAACATTGGAGCACTACACGGG
GATTTATCAGACTCGCACAGCCACATCGCTGCGGGCGACGAAATCCGCTCCATACCACCT
CTGCAAAACCTAGCGGGAGCTCCAGCAATAGCTTTTCATTTTGATATCTGAAGAGCACCA
TCCCCTCTTCGCCCGGCGAAAGCGGTTCATCTTCGGGACCAGGACCAAGCGCGCTCAGCG
GCTTGAGGAGCTAAGCTTCTGTTTGATACACAAGCAGTATCCACTGCCAAGGATACTCAG
TCGCCGAACTCTGCCTGTGACTCGCACCTGTTGCGTGCGGCAGTATCAACATGCGGTCAA
GACTTCTATGGGCCTGCGGGCTCGCAGCGCTTCTGGCGCTAGCGGCAATGCCTGCGGCGC
TTGGGCAAAAGATCTTGCCGAAGTTCCCCTACTGCCGCTGCGTGAAGAAGGGACCCTACG
CCCTGGCCAAGAACGTGGACGAGATTGACGGGTACTACTGCTTTGAGATTGAGCAGGTGC
CCTGCGGCAAGGACAAGTGCTGCAAGATGGATTTGCGCAAAGTCGAATTCGATGCCAACG
TTGCGTGCCGCGACACCACCAAGGTCACAGCCATGGTGAACGGCCTGCTGCCCAAGCAGC
AGCCCACCTGGACGGCGCCGCAGGACACGCCCGCCGGCAAGGCCGTGCTCAAGCTGTCGG
GTCTAGGCCTCAACATCACCACCGCCCCCGGCTCGCTGGTGTGCCTGAAGCTGGACGGCC
AGTGCAACACGCTGGAGAAGCTGTGCGCCGTGCCCAAGGGCCAGATGCCCGGCATCTGCG
CCATCAGCATGTTCAACACTAAGGACACGTGCTGCCCCATCTCCCAGACCGGCTGGCCCT
Tcccgcccccgcccccgccccccagcccgcgcccgtcgccccctccccgcccccctccgt
cccccccgccgccccGCAAGCCCTCGCCGCCCCCCTCTCCCCCTGCCAGCTGCCCCATCT
GCATCACCCTCAACACCACCGACGTGTCCCTGACTCGTGAGGTGTGCGACAACCTGGCTG
ACTACGTCAACTCTGTCTGGGTGGACCGCTCAAACGCCACGCTGCTGCAGCCCTTCAGCT
GCAGCCTGGCCACGCCCTCCCAGGTCAAGATCTGCGCCGTGGCTGAGGGCAAGCCCGACA
CGGTGGATTTTGCTGGCATTGCGGAGGACACTTACGAGATCCAGCTGATGCTGGAGGAGC
TGGGCCTCAGCTGCGCCTTCCCCAGCATGATGGGGACCAGCATGGTGTACCTCGTGGAGT
ACGGCACGTGCCGCGCCGTGTTCACCTACGTGCAGGACTGCAAGCAGCCCGGCCCCCAGC
CTTTCCCCTTCTGCGTCTGCAACCGGCGCCCCAAGGCCACGCCCTTTGCGCTGGACCCTA
CCATCCGCGTCAAGCCCGGCTCCTCGCCGCGCTCCACCAACTACTGCTGGACCGCCACCA
CCGTCGCGCCCTATGACCCCACCTCGCCCTGCGGCAAGACCAATGAGCTGTACAAGGCGG
AGTTCTACGTGCGCAACAACACGCGCGGCGCCGTCACCGGCCTCACCGCCGCCGGCAAGT
CCTGGTCGCCCGTATGGGACAGCGATGGCAAGGTGTTCCGCCTGACCAACCTGATGTGGA
CCGTGGACTTCGTCAACACCAACAAGCCCCAGATCTGCGTCGAGCTGACGGGCATCACGC
TGGGCCAGTTCTGCGTGACTGCCAATTGCCAATACGCGTTGTTTGACGCGTCCAAGAGCT
GCTGCCCCATGGGCACTGCCTCGCTCGGGTAAGCGCTGAGCAGCGCCTCCAGTGACACGT
CAGTCGCGTTAGTGCCGATGCGACACTTGTGGTGGGCGGGTTCTGCGGCCTGGCCCCTCG
CTGTCGAGTGCGGCACGAGGGGCCCGCCGCATGAAGCACATCGTGGACTGCCGGTAGAGC
GTCATGGACAGAGCCGTTGCGGTCAGTGTTGTGGACTTTTATAGTTAAGGCGGGCGGGCA
CAACCGTGCAGGTGGCCGGGCGTGTGACAGTCCATGCTGTGTGTATGTGTACGGCGGCGC
AGGAGGGCCCGCGCCGGACAGCGGCTGCAACAGGAATGACTTGGTGTTGTGACGCAATTT
ACCCATGCATAGGAAGTGGCCAGTATTGATTCATAGAACGCTTGAGAGCTCTTACCATTT
CCACTTAGCCGTGAAGTGCCTGGGGCTCATTAGTGGTGGGATGAATTCTCCTGCCTGATC
TAGTAGATAGTGCTGTGTCGTTCCTTCATAGCTGTGACAAATTGATTGCTGCACAGAAGC
TGTAGACGTCGGCGCTGGTGGTCAAAACAGCAGGCAAGCAAGTGACGCACGCAAGCTAAC
AAACAAAATGTAAGAGAGAAATGCG