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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g548350.t1.2
CDS Infomation

pacid=30792547 polypeptide=Cre12.g548350.t1.2 locus=Cre12.g548350 ID=Cre12.g548350.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGGCAAGGAGGGCGTGCTGGTGCCGCAGGCAGCACAGGTGGGGCACACCCGGCAGCTG
GACGCGCTGTGTGGCATGGCGGCGGAGGTGCAGAGCCTGGCCTCGTGCGTGCAGGCCGGT
CACCACCTGCTGGCAGTGACGGACGCGCTGGGCAACGCGCGGATACTGGCCACACCCCTG
CACCCCGGCGCGGCGGAGGAGCCGGCAGGCGGCGCCGAGGGGGCGTCGGGGCGGCACGTG
CTGCAGCTGCCGGCGCGGTCTCGCGGGGAGTGCGGGTGGACGGGCCTGGTGATGAGGCCA
GTGGCGCCGGAGGCGGCCGGCCCCCAGGACGGCGCGTCTGCCGGCGGTGCGCTGCCGGAG
CTGGAGGTGGCTGTGGCTCGGCAGCTGCCTCGGGACGTGTGCGTGTACCGGGGCGGGGAG
CTGGTGCGGAGCTTCAACACGGCGCAGGGCCCCACGGCGCTTACATACCTCCCGCCGGGC
CCATTCGGCGGCTGTGCGGACGCGGCGACGGGGCTGCTGGCTGTGGCGGAGGAGCACCAG
GTGGCGCTGTGGGACGTGCGGCAGGGCGAGCGCGGCGGCTGCGTGCAGCGGGTCAACGCC
TACAACGGCGGCTGGCCGCTGTACGGCCTGGCCTGGGTGGCGGGCGCCGTACGGGACGAG
GCGGGCGGGCCGGCCACGGGGCTGCTGGCGGTCACGGGCGCGGAGCGGTCCGTGGTGATG
CTGGAGCCGCGGAAATGGCACATTGCCACCAAGTGGCCGGGCTGCGTCAAGTACCCTGCC
ACCCACTTGGTGCCCTCCGCCGCCGCGCCCGGCCACGTCTACGTCGCTGGCCTCGACTAT
GAGTGCGCAGCCGGCCGCTGGGATGGCAGCAGTGGCGGCGCCGCTGGAAACGCCAACAGC
AGCAGCGGCGGCCACGGACGCGCCGTGCTGCCGCCGCAGCTGCAGGCGCGGCAGCAGGCG
CAGGAGGCAGCGGCGGGCGCGGGCGCGGCGGCGGCGGTGATGGATGATGTTGAGGGCGGC
GGGAGGGCAGGCCTGTCATTCCGAGGCGACAGCAAGTGGCTGGGTCTGGCGCACGCCGTG
CTGCCGGCATCAGCATCGGCGTCGGCATCGGCTGGTGGCGGGGGCGGGCGGTGTCGGGAC
CTGCTGGCGGCGCTGAGCCTGTCGGGGAATCTGTTTGTGCTCACGGCGAGTGCAGCGGAC
TGA

Peptide Sequence

PEP ID

Cre12.g548350.t1.2
PEP Infomation

pacid=30792547 transcript=Cre12.g548350.t1.2 locus=Cre12.g548350 ID=Cre12.g548350.t1.2.v5.5 annot-version=v5.6
Sequence

MGKEGVLVPQAAQVGHTRQLDALCGMAAEVQSLASCVQAGHHLLAVTDALGNARILATPL
HPGAAEEPAGGAEGASGRHVLQLPARSRGECGWTGLVMRPVAPEAAGPQDGASAGGALPE
LEVAVARQLPRDVCVYRGGELVRSFNTAQGPTALTYLPPGPFGGCADAATGLLAVAEEHQ
VALWDVRQGERGGCVQRVNAYNGGWPLYGLAWVAGAVRDEAGGPATGLLAVTGAERSVVM
LEPRKWHIATKWPGCVKYPATHLVPSAAAPGHVYVAGLDYECAAGRWDGSSGGAAGNANS
SSGGHGRAVLPPQLQARQQAQEAAAGAGAAAAVMDDVEGGGRAGLSFRGDSKWLGLAHAV
LPASASASASAGGGGGRCRDLLAALSLSGNLFVLTASAAD*

Transcript Sequence

Transcript ID

Cre12.g548350.t1.2
Transcript Infomation

pacid=30792547 locus=Cre12.g548350 annot-version=v5.6
Sequence

CAAAAGCGAGCCAAGCCCAGTGGGCCCACTTTCGAGCGAGGATCGGACTTATCTCCTGAG
AAGTGCGTAAAATGCCTTCTCAAGCTGCCGCAGCGCTTCACGCCAGGCGCATTGCAGTCG
AACCGTGTCGGGCTTTTGGTCAACGGCGACATCGTTACTGCCTACGTGTCCAATGCGCAG
CATACGTATGAGGTCGATCTGGGCCCCATCTTTGCGCCCGGGGCCGTTGGCGACGTGGCG
ATGGGCAAGGAGGGCGTGCTGGTGCCGCAGGCAGCACAGGTGGGGCACACCCGGCAGCTG
GACGCGCTGTGTGGCATGGCGGCGGAGGTGCAGAGCCTGGCCTCGTGCGTGCAGGCCGGT
CACCACCTGCTGGCAGTGACGGACGCGCTGGGCAACGCGCGGATACTGGCCACACCCCTG
CACCCCGGCGCGGCGGAGGAGCCGGCAGGCGGCGCCGAGGGGGCGTCGGGGCGGCACGTG
CTGCAGCTGCCGGCGCGGTCTCGCGGGGAGTGCGGGTGGACGGGCCTGGTGATGAGGCCA
GTGGCGCCGGAGGCGGCCGGCCCCCAGGACGGCGCGTCTGCCGGCGGTGCGCTGCCGGAG
CTGGAGGTGGCTGTGGCTCGGCAGCTGCCTCGGGACGTGTGCGTGTACCGGGGCGGGGAG
CTGGTGCGGAGCTTCAACACGGCGCAGGGCCCCACGGCGCTTACATACCTCCCGCCGGGC
CCATTCGGCGGCTGTGCGGACGCGGCGACGGGGCTGCTGGCTGTGGCGGAGGAGCACCAG
GTGGCGCTGTGGGACGTGCGGCAGGGCGAGCGCGGCGGCTGCGTGCAGCGGGTCAACGCC
TACAACGGCGGCTGGCCGCTGTACGGCCTGGCCTGGGTGGCGGGCGCCGTACGGGACGAG
GCGGGCGGGCCGGCCACGGGGCTGCTGGCGGTCACGGGCGCGGAGCGGTCCGTGGTGATG
CTGGAGCCGCGGAAATGGCACATTGCCACCAAGTGGCCGGGCTGCGTCAAGTACCCTGCC
ACCCACTTGGTGCCCTCCGCCGCCGCGCCCGGCCACGTCTACGTCGCTGGCCTCGACTAT
GAGTGCGCAGCcggccgctgggatggcagcagtggcggcgccgctggaaacgccaacagc
agcagcggcggccacggacgcgccgtgctgccgccgcagctgcaggcgcggcagcaggcg
caggaggcagcggcgggcgcgggcgcggcggcggcggtgatggatgatgttgagggcggc
ggGAGGGCAGGCCTGTCATTCCGAGGCGACAGCAAGTGGCTGGGTCTGGCGCACGCCGTG
CTGCCGGCATCAGCATCGGCGTCGGCATCGGCTGGTGGCGGGGGCGGGCGGTGTCGGGAC
CTGCTGGCGGCGCTGAGCCTGTCGGGGAATCTGTTTGTGCTCACGGCGAGTGCAGCGGAC
TGAGCGACAGCGGATTGCGCGACGGCGAACTGGGCAGTAGCGGGTGGTGGCAGCGGGCGG
TGAAGTGCGGCGGACTGAGGGTTAGGGCTGAGCGGATGGCGGCTGAAGATTGTGCGGCGC
GTTGCAACTTGCAAGCAAGCCGGCAGCGAGCGGGGGCCCCTCGGAGCCAGGGCCATTGGT
TGAGTGCACGGCAGGCTGCCCTACTCCAGTAGACTGGTGTGCAGAGTCGGGAGGTGGCCT
GTACACCAGTCCTGCGGATGCCCGTTCCGGTTGCAAGGCGTGTGTTGAGGCTTGGCGGAC
CAACCCGAAGGCCCTGCACTGGCCCCTCCTTGCCGCGCGCGCTGGGGCGCAACGGCCCTG
CGGGCAGCGGAGCATTTGGTGGCGCATGAGGCATCACGGCAGGAAGAGAGAAGTGGACAG
CGAGGGTTGGCTGCTGTTCTGCACCGTAAGTTTTTGgtgtgctcctcctgctgaagctga
tgggcttcgagcggccgaccaagctgcagcggccgccatggccgccggcggcggcggggc
cgggctgagagcctgaacggcgctagcagggcgtggggctgagggtgcacgtgtcgattg
gcggcgagtgacgtgactagtttgttagctgcgggttagcacggactgtgcaccccaccc
aaccggccacgtccggatttgcggggatgccaaaggcccccaacatagaggcgtgtgctt
agtaggcgcccgcgtcaaggtggctgggttgataacgacccgggaggggagggctcagcc
cttttcctgcctccctaaggcagccacctccttgttg