Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g546300.t1.2
CDS Infomation

pacid=30791664 polypeptide=Cre12.g546300.t1.2 locus=Cre12.g546300 ID=Cre12.g546300.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCCGATGTGGCTGCTGAGGCGGTTTCCCTGGAGCTTGAAAGCCCTTCTTCCAGCTCA
CAGGGTTCGCCGGAGTCCGCAGCAAATGGCGCAGCTAGGGCCGCCTCGCCCCGCGCGCAA
TCGGATGCCAGTGGAGCTGTTATGAAGAGCAAGAAGGGCAAGGCACAGGACCCTTCTTTG
GATTTTGTCAACGTGCTGAGCAATCGCATCGATGAAATCGAGCGTGCGGCCGCGGGGAAC
GGCGGGCCGGCGGAGCGGGAGGCGGCCAAGTCGCGGAAGAAGCAACTGCGCGAGGTCATC
AAGTTCTGCAGCGACCGCGCGAACAGCCCCGAGGACCGCATTAACTTCATCCAGCAGAAA
TACACGCAGCAGCTGTCCGAGCTGCTGCGCATGGAGCGGCAGCTGCTGGACCTGCAGCGG
GAGCACGAGGTGGTCAGCAAGGAGAAGGACAAGGTCCAGGCAGAGCTCAAGAAGACCAAC
CTGCTCAAGGACAAACTGGAGGAGCTGTGCAGGCAGCTGCAGAAGGAGGCGCGTGAGGTG
GCGGAGGAGAGCCGGCGGCGCAATGAGGAGGACCTCAAGCAGCGCCAGGCGCTACAGGCC
AAATTCACCGCCGCCATCAACGAGGTGAGCGAGAAGATGGACGCGCAGGCGTCGGAGCGG
TCGCGGCAGCTGGCTGAGAACGAGGAGCTGCGCGGCAAGCTGGACAGCTTCCTGGGGCAG
TTCGAGAGCTTCAACGCCATGGTCCAGAAGAAGGACCTGGAGCTGCAGCTGGCGCAGGCG
CGGGCGGAGCAGGCCACGGCGCTGGCGGCGCAGCTGCAGCAGCGGGCGGAGCTGCTACAG
GAGGCGAACAGCAAGTACGCGTCCACAATAGAGGCCATTAAGCCGCAGCTGTCTGACCTG
GAGGGTCTGCGGCAGCGCAACGCCGTGCTGACCACCGCCAAGGACGAGCTGACGGCGCAG
CTGGAGCACTACGCGGACAAGTTCGCAGAGTTCCAGGAAACGCTCACAAAGAGCAACGAG
ACGTTTGCCATGCTGCGCGAGCAGCTGGAGGCGGGCACCAAGGCGCGCACCGCCATCGTC
AAGGAGCGGGACGAGGCGCGGCGGCGGGCGGAGGGGCAGGACCAGACCATCGTCAAGCTG
GTGCAGGACCGGCTGCAGCTCAAGCAGCAGGTGGAGGGCATGACGGCGAAGGCGCGGACC
GAGTCGGACGAGCTGCGGCGGGTGCGTACCCAGAAGGAGCGCCTGGAGGGGCTCTGCCGC
ACGCTACAGGCAGAGCTCAAAGCGTTCAAAGCGGGCGGAAGCGCGGCACCGGCGCCGGCG
GACGCGGGTGCACAGGAGGGCGGGTCGTCGCCAGCGGCGGCGGAGGGCGCGGGGAGCGCG
GCGGCGGCAAGCGGGGACGCAGCAGGGCCAAAGGCGCCTGCGGGAGCAGAGGACGCGGCT
GGTAGCGGAGCCGGAGGCTCGGCTGCGGCGGCGGCGGAGAGCAGCGTGGTCGCGGCAAAG
GAAGGCGGGACTGAGCGCGCGGTAGATGAAGCCCCAAAGGCAGACGTCGTCTCCGCACTG
CCTAGTGACTTGTACTGA

Peptide Sequence

PEP ID

Cre12.g546300.t1.2
PEP Infomation

pacid=30791664 transcript=Cre12.g546300.t1.2 locus=Cre12.g546300 ID=Cre12.g546300.t1.2.v5.5 annot-version=v5.6
Sequence

MADVAAEAVSLELESPSSSSQGSPESAANGAARAASPRAQSDASGAVMKSKKGKAQDPSL
DFVNVLSNRIDEIERAAAGNGGPAEREAAKSRKKQLREVIKFCSDRANSPEDRINFIQQK
YTQQLSELLRMERQLLDLQREHEVVSKEKDKVQAELKKTNLLKDKLEELCRQLQKEAREV
AEESRRRNEEDLKQRQALQAKFTAAINEVSEKMDAQASERSRQLAENEELRGKLDSFLGQ
FESFNAMVQKKDLELQLAQARAEQATALAAQLQQRAELLQEANSKYASTIEAIKPQLSDL
EGLRQRNAVLTTAKDELTAQLEHYADKFAEFQETLTKSNETFAMLREQLEAGTKARTAIV
KERDEARRRAEGQDQTIVKLVQDRLQLKQQVEGMTAKARTESDELRRVRTQKERLEGLCR
TLQAELKAFKAGGSAAPAPADAGAQEGGSSPAAAEGAGSAAAASGDAAGPKAPAGAEDAA
GSGAGGSAAAAAESSVVAAKEGGTERAVDEAPKADVVSALPSDLY*

Transcript Sequence

Transcript ID

Cre12.g546300.t1.2
Transcript Infomation

pacid=30791664 locus=Cre12.g546300 annot-version=v5.6
Sequence

CACATAAATTATCAGTGTGTATATCCCGAAACAGCAAGACATTTAACGAGTTCCAGTCCC
GAACACCCTGTTTTCCTGCGCGTTTTCATTTAAAGATGGCCGATGTGGCTGCTGAGGCGG
TTTCCCTGGAGCTTGAAAGCCCTTCTTCCAGCTCACAGGGTTCGCCGGAGTCCGCAGCAA
ATGGCGCAGCTAGGGCCGCCTCGCCCCGCGCGCAATCGGATGCCAGTGGAGCTGTTATGA
AGAGCAAGAAGGGCAAGGCACAGGACCCTTCTTTGGATTTTGTCAACGTGCTGAGCAATC
GCATCGATGAAATCGAGCGTGCGGCCGCGGGGAACGGCGGGCCGGCGGAGCGGGAGGCGG
CCAAGTCGCGGAAGAAGCAACTGCGCGAGGTCATCAAGTTCTGCAGCGACCGCGCGAACA
GCCCCGAGGACCGCATTAACTTCATCCAGCAGAAATACACGCAGCAGCTGTCCGAGCTGC
TGCGCATGGAGCGGCAGCTGCTGGACCTGCAGCGGGAGCACGAGGTGGTCAGCAAGGAGA
AGGACAAGGTCCAGGCAGAGCTCAAGAAGACCAACCTGCTCAAGGACAAACTGGAGGAGC
TGTGCAGGCAGCTGCAGAAGGAGGCGCGTGAGGTGGCGGAGGAGAGCCGGCGGCGCAATG
AGGAGGACCTCAAGCAGCGCCAGGCGCTACAGGCCAAATTCACCGCCGCCATCAACGAGG
TGAGCGAGAAGATGGACGCGCAGGCGTCGGAGCGGTCGCGGCAGCTGGCTGAGAACGAGG
AGCTGCGCGGCAAGCTGGACAGCTTCCTGGGGCAGTTCGAGAGCTTCAACGCCATGGTCC
AGAAGAAGGACCTGGAGCTGCAGCTGGCGCAGGCGCGGGCGGAGCAGGCCACGGCGCTGG
CGGCGCAGCTGCAGCAGCGGGCGGAGCTGCTACAgGAGGCGAACAGCAAGTACGCGTCCA
CAATAGAGGCCATTAAGCCGCAGCTGTCTGACCTGGAGGGTCTGCGGCAGCGCAACGCCG
TGCTGACCACCGCCAAGGACGAGCTGACGGCGCAGCTGGAGCACTACGCGGACAAGTTCG
CAGAGTTCCAGGAAACGCTCACAAAGAGCAACGAGACGTTTGCCATGCTGCGCGAGCAGC
TGGAGGCGGGCACCAAGGCGCGCACCGCCATCGTCAAGGAGCGGGACGAGGCGCGGCGGC
GGGCGGAGGGGCAGGACCAGACCATCGTCAAGCTGGTGCAGGACCGGCTGCAGCTCAAGC
AGCAGGTGGAGGGCATGACGGCGAAGGCGCGGACCGAGTCGGACGAGCTGCGGCGGGTGC
GTACCCAGAAGGAGCGCCTGGAGGGGCTCTGCCGCACGCTACAGGCAGAGCTCAAAGCGT
TCAAAGCGGGCGGAAGCgcggcaccggcgccggcggacgcgggtgcacaggagggcgggt
cgtcgccagcggcggcggagggcgcggggagcgcggcggcggcaagcggggacgcagcag
ggccaaaggcgcctgcgggagcagaggacgcggctggtagcggagccggaggctcggctg
cggcggcggcggAGAGCAGCGTGGTCGCGGCAAAGGAAGGCGGGACTGAGCGCGCGGTAG
ATGAAGCCCCAAAGGCAGACGTCGTCTCCGCACTGCCTAGTGACTTGTACTGAAGCCGCA
AGTGCCAGGGCAGGCAGGTGTCTTTATCATACATAGCTACAGCTAGTTAGGCTAGGCGCT
GGTACAGGTTCATGCGAATAGATTGCTAGCTAGCATGGCGTCGTGGTGTCGCCCACCTTG
CGCATAGGGACGGTCCTATTAATGGCGTGTTTTTGGCCATgctgagtgctggacacatgg
cgggcggtgcctgtacaaaccgcccccagttaagtctgggaggtgaggtggtttcggagc
ctgcggcctcagacattgtaccaacatggcattggtgcaacgtgtcgattggcggcgagt
gacgtgactagtttgttagctgcgggttagcacggactgtgcaccccacccaaccggcca
cgtccggatttgcggggatgccaaaggcccccaacatagaggcgtgtgcttagtaggcgc
ccgcgtcaaggtggctgggttgaaaacgacctgggaggggagggctcagcccttttcctg
cctccctaaggcagccacctccttgttggcCATGCTAGTGGGGCTGTGCCTGTGCAAGGG
CGGCGCAGCAGCTAGCATTATAGCATAGAGCTATGCAGGATGGTGCCGACGTATGAGGGC
CAGGGATTGTTGGCGGAACGGGTCACAGTTCGCTGCGTTACAAGAGTTGCAGGCGGGGCC
TTTGACAGGACTTGCAAGGGAACACGCACCCTGGCGGCAAACCTTCATCATTTTCGCGAT
GTGTGAGCCTGATGTAACCTGTTTAGAGGTGGATTTCTTGTTTCTGTTTCTGGGCCAGGC
CTGTGCACACGCACGCAGCGAAGCCGTGGAGTGGACGACGGCGGAAGAACATGGCCAGCG
GACCATGGGTGCGAAGGTGGCACGCATGCTGTGCCTGTTGCTGGGTGGCGT