Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g544600.t1.2
CDS Infomation

pacid=30792610 polypeptide=Cre12.g544600.t1.2 locus=Cre12.g544600 ID=Cre12.g544600.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCCGTTCTGGATAACAACATGGCGGTGGTGGGCCAGTTCAGCGGGGGAGTCGTGCTT
GGGTCCTCCATCAACACGCCCGCGCTCAAGGCGTCCCTTGCCGACGTGCTCGCTTCTTTT
CCGTTCTTTGCGGGCCGTGCGTACTTCGCGGACGATGGCAGCCTGGATGTGCGCTACCCC
CAGCCAGGCGCAGCCCCCGGTAGCGCTGACGTCAGCAGCACCAGCGCCACAACCAGTAGC
ACGATCGCCGCCGGCCCTCCTGGCCCCACTGACTCGGGCGGCACGTACGGCGCGCGGTTC
GTGGCGGCCAGCACGTCGGCCACGCTGGCGGAGGTGTTGGCGGCGTTGCAGGGGGGTGGA
CGCCATGCTGCCGTGCTGCAGAGCCCCTGGGGGCTGGTGCCGGGACTGATGCCGCCCCAT
GACCTGGACGCGCTAGTTCAGGGCCAGTGGCCGCTGGCGGGCGGGCTGGTCCTGCACCTG
CGCGGCGGCGGCGCGGTGCTGTGGGTGGGCGCACACCACGGCCTGGCGGACTTCGAGTCC
CTGCAGCTGCTGGCAGGCCACTGGGCCGCCGCCTACAACACCCGCCTAGCCCTCGTGTCC
GGTGACAGCAGCGGCAGTGCCGCCAGTGGGGGTGCGGCTGCAGCAGGAGGCAAGGCAGGG
GCCGCCGCTGATGTACAGGGCGGGGGCGCAGGCGCGTGCCACGACTACACGGCTCTGCTG
CCGGAGCGGCTGCGGCGGCCCTTCATGGATGGCGAGGCTGTTGACGCGCTGGCGGACTGG
GCGCCGCCGGCGCCCGGCCTGCCGCCCCGGCGGGAGGTGGTGGAGGGCGGGCGCTGGTCG
GGTCTGAGCGTGACTGCCAAGGCGGTGTGGCACATGATGTGGCGCGGCGGCGGTGTGCAG
GCCCGCTGCCTGCGTGTGTCGGGGTTGCGGCTGGCAGAGCTCAAGGCGCAGGCGTCACAA
GAGCTGGCGGCGGAGGCGAAGGTGGGGGCGGAGGCAGCTGCAGGCGCAGGCACAGGGGCA
GGCACAGGGTCCAGCCAGGACGCCGCCAAGCCTGTGGAGTGGATCTCCACCAATGACGCG
CTGGTCGGGCGGCTGATGCAGGTGCTGCACAGCCGTGTGCGGCTGCGCCGCCGCCACCCG
GTCAGCTGCTTCATGGCAGTGGAGATGCGGCGGCGCCAGGAGCCCACCGGCGAGCGCGTG
CAGCTGCCGGCGGCGCAGGTCGGCAACCTTACCTACTCGGCGCGGCTTGAGGGCTTGCGC
CCGGCTGAGATGAGCCTGGGCGCGCTGGCGGCGGCGATGCGGCGCGAACTGCTGTACCAC
GTGTGGCCGCAGTTCCGGGGCTGCTTGGCGCGCACTGCTGCAGCGCTGACAGCTGTGGGG
CCCAAGGGCCTGGTCTGGGGCTTTTGCGCGGAGCGAGACCTGCATGAAAACATCTTTGCG
CCCGAGGGCCCGCTCAACCTGACGTGCTGGGATGTGGACTACAGCCTGTGGCAGTTCGGG
CCCACGCCGCCGCTCGCCTTCATCCCGCCCTCGACTGAGCTGGGCCCCTCCGTCATCTGC
ATCGTGCCCGAGCCGCCTTCACAGCGGCAGGGGCAGGGGCAGCAGTCGGGACAGCAGCAG
GGGCAGGGGTCGCAGGAGTCAAAGGACCGGGGGTCGCAGGGCGGCAAGGCCAGCTGCGGC
GTGGTGCTGATGATGTCCATGCACAACGCCGTGTGGAAGCAGCTGGACGCGGAGGGAGTG
GATCTGGCCACAGCCATCTGA

Peptide Sequence

PEP ID

Cre12.g544600.t1.2
PEP Infomation

pacid=30792610 transcript=Cre12.g544600.t1.2 locus=Cre12.g544600 ID=Cre12.g544600.t1.2.v5.5 annot-version=v5.6
Sequence

MSVLDNNMAVVGQFSGGVVLGSSINTPALKASLADVLASFPFFAGRAYFADDGSLDVRYP
QPGAAPGSADVSSTSATTSSTIAAGPPGPTDSGGTYGARFVAASTSATLAEVLAALQGGG
RHAAVLQSPWGLVPGLMPPHDLDALVQGQWPLAGGLVLHLRGGGAVLWVGAHHGLADFES
LQLLAGHWAAAYNTRLALVSGDSSGSAASGGAAAAGGKAGAAADVQGGGAGACHDYTALL
PERLRRPFMDGEAVDALADWAPPAPGLPPRREVVEGGRWSGLSVTAKAVWHMMWRGGGVQ
ARCLRVSGLRLAELKAQASQELAAEAKVGAEAAAGAGTGAGTGSSQDAAKPVEWISTNDA
LVGRLMQVLHSRVRLRRRHPVSCFMAVEMRRRQEPTGERVQLPAAQVGNLTYSARLEGLR
PAEMSLGALAAAMRRELLYHVWPQFRGCLARTAAALTAVGPKGLVWGFCAERDLHENIFA
PEGPLNLTCWDVDYSLWQFGPTPPLAFIPPSTELGPSVICIVPEPPSQRQGQGQQSGQQQ
GQGSQESKDRGSQGGKASCGVVLMMSMHNAVWKQLDAEGVDLATAI*

Transcript Sequence

Transcript ID

Cre12.g544600.t1.2
Transcript Infomation

pacid=30792610 locus=Cre12.g544600 annot-version=v5.6
Sequence

CATGTCAGTCTTTTCCACATAATTACATGCATTAAGACGTAGAGTGTGTCTCTATCCCGC
CATAAACCGGATAACCAAACCGTAAAGAGAACTGCCTTGCGACTCACACGTAGCTGCGCC
GAGCCCTGCAAGCTTGTTTTGGCATACTCAAATAAGATGGCGTCCAGAGCTGCGCCGGAT
CCTTTCGCCTGGCCAGCCTTCAGGTTGCTTTCCAGCGAACTTGTGTCACCCAATCTTGGT
GCCTGGCCTGGCCTGGCCTCAGCGAAGCCTGGCCCAGCTACGGCGAAGCAGCAAGAGCAC
CGATGCATGTCCGTTCTGGATAACAACATGGCGGTGGTGGGCCAGTTCAGCGGGGGAGTC
GTGCTTGGGTCCTCCATCAACACGCCCGCGCTCAAGGCGTCCCTTGCCGACGTGCTCGCT
TCTTTTCCGTTCTTTGCGGGCCGTGCGTACTTCGCGGACGATGGCAGCCTGGATGTGCGC
TACCCCCAGCCAGGCGCAGCCCCCGGTAGCGCTGACGTCAGCAGCACCAGCGCCACAACC
AGTAGCACGATCGCCGCCGGCCCTCCTGGCCCCACTGACTCGGGCGGCACGTACGGCGCG
CGGTTCGTGGCGGCCAGCACGTCGGCCACGCTGGCGGAGGTGTTGGCGGCGTTGCAGGGG
GGTGGACGCCATGCTGCCGTGCTGCAGAGCCCCTGGGGGCTGGTGCCGGGACTGATGCCG
CCCCATGACCTGGACGCGCTAGTTCAGGGCCAGTGGCCGCTGGCGGGCGGGCTGGTCCTG
CACCTGCGCGGCGGCGGCGCGGTGCTGTGGGTGGGCGCACACCACGGCCTGGCGGACTTC
GAGTCCCTGCAGCTGCTGGCAGGCCACTGGGCCGCCGCCTACAACACCCGCCTAGCCCTC
GTGTCCGGTGACAGCAGCGGCAGTGCCGCCAGTGGGGGTGCGGCTGCAGCAGGAGGCAAG
GCAGGGGCCGCCGCTGATGTACAGGGCGGGGGCGCAGGCGCGTGCCACGACTACACGGCT
CTGCTGCCGGAGCGGCTGCGGCGGCCCTTCATGGATGGCGAGGCTGTTGACGCGCTGGCG
GACTgggcgccgccggcgcccggcctgccgccccggcgggAGGTGGTGGAGGGCGGGCGC
TGGTCGGGTCTGAGCGTGACTGCCAAGGCGGTGTGGCACATGATGTGGCGCGGCGGCGGT
GTGCAGGCCCGCTGCCTGCGTGTGTCGGGGTTGCGGCTGGCAGAGCTCAAGGCGCAGGCG
TCACAAGAGCTggcggcggaggcgaaggtgggggcggaggcagctgcaggcgcaggcaca
ggggcaggcacagggTCCAGCCAGGACGCCGCCAAGCCTGTGGAGTGGATCTCCACCAAT
GACGCGCTGGTCGGGCGGCTGATGCAGGTGCTGCACAGCCGTGTGCGGCTGCGCCGCCGC
CACCCGGTCAGCTGCTTCATGGCAGTGGAGATGCGGCGGCGCCAGGAGCCCACCGGCGAG
CGCGTGCAGCTGCCGGCGGCGCAGGTCGGCAACCTTACCTACTCGGCGCGGCTTGAGGGC
TTGCGCCCGGCTGAGATGAGCCTGGGCGCGCTGGCGGCGGCGATGCGGCGCGAACTGCTG
TACCACGTGTGGCCGCAGTTCCGGGGCTGCTTGGCGCGCACTGCTGCAGCGCTGACAGCT
GTGGGGCCCAAGGGCCTGGTCTGGGGCTTTTGCGCGGAGCGAGACCTGCATGAAAACATC
TTTGCGCCCGAGGGCCCGCTCAACCTGACGTGCTGGGATGTGGACTACAGCCTGTGGCAG
TTCGGGCCCACGCCGCCGCTCGCCTTCATCCCGCCCTCGACTGAGCTGGGCCCCTCCGTC
ATCTGCATCGTGCCCGAGCCGCCTTCACAGCGGCAGGGGCAGGGGCAGCAGTCGGGACAG
CAGCAGGGGCAGGGGTCGCAGGAGTCAAAGGACCGGGGGTCGCAGGGCGGCAAGGCCAGC
TGCGGCGTGGTGCTGATGATGTCCATGCACAACGCCGTGTGGAAGCAGCTGGACGCGGAG
GGAGTGGATCTGGCCACAGCCATCTGAGCCGCCCAACGCATAAATGGATAGGGATTGAAG
CGGTATTATGGCTGACAAGCTCCGTCCAGGTTACGCCGTGGCAGGCGTTGCGACGTGCGG
GCATCGCTGACTGCAGCTGTGTACAGGGTGTGCGTGCACGTGAGGGGCATGGACAGACAC
CAGCGGCCTGTGCCGGCAGACGCTTACAGTACTGTGCGGACAGGCACTCAGGCATTGAGC
ATTTGAGCATGAGGGAATTGCAATGAGCATCCATGTTGCGAGCTGTGCCAGTTGTAGTTT
GTCCATTCCATTGCGAGGATGACGCGGGTGACTGAAGTGATGCTGAGTGATGTGGTACGG
TAAGTGTACAGGCAGGCGTTGGTTACTGTTGCATTGACCGTATTGTTGGAGTGAAGTAGA
TTACTATGCAGACAAGACAGGCCAGGACAGACCGTTCTTGCTGTAGCCCGCGGCGTCGCA
CGGCTTGCGGACAGGCCTGCTGGTCAGGGAGGTGCAAGCCAGTGCGAGCGCGTGTGAGGG
TACTGCATGCAGGCCAACAATCGGACCACTTCAAGGCTTTTGGCACTTCTAATCTATATA
TGTTTTCCA