Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g544000.t1.2
CDS Infomation

pacid=30793444 polypeptide=Cre12.g544000.t1.2 locus=Cre12.g544000 ID=Cre12.g544000.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCTGAGCCGGGCGAGGAGCCCGTCGCTGCTCCTGCGGGACCGGCTCCGGACCCAGTG
CTCAATGAGCTATATGGATCGGAGCGACCTGCTGTGGAGCTATTACCAGGAGTTCCTCTG
TCACCAATTGTAAACTCCTGTTGGCTTCCAGCAGATGCCAAGGCGATGCTGGCGGAAAGC
TGGATTCCCGTCCCACCGGAGGACGCGGGCGAGGAGGCAGGCCCCCCACCCCCTGCGTTC
GAGGCCGCTGCGCCCGAGTACAACGAGCTGGTACGGAGGCTTGCAAAGACAGCTCCCTTT
CGCAAGTGGAATGAGTTAACAATCCAGGCGAAGCAACTGGAGCAGGAGGTTGCGGGGCTC
AAAGGACCTGACGCAGAGGCCAAGCAGGCGGAGCTTGAGAACGTCAAGGTGCAGATTGCG
GACGCAGAGGCGGCGGTGGCGGAGGTGAAGCAATCGTTCAGCGACGACCCGCTGTCGCTG
ACGGGCTGGATGCAAGCACTGACGGACCTGGCGGACGGGGGGATGACCACGTTTGAGGTG
AGCGGCCAGGGCTGGCCTTACTGCTCTTTGCGGCAGCTGTTCGGCGAGATGCCGTCCGCG
GCGCCGCCCGCGGGCTTCTTCGACGGCGTGGAGCGTGTGCTGGGCACCTTCAAGCGGAGG
TACGAGAAGGAGCGCGGGCCGGGCAGCGTTCAGCTCATGCTCAAGCTCGCGCCCAACGTG
TTCTCCGACGCCTGGTCCACTGGCGGCGCGCCCGCCGCGGTGGCCGCGGTGGAGGCGTAC
GTGGAGCGCGCTCGTGCCAACGTGTTCGGCCCCGATGGCGGCGTGACGCCCGAGGGAGTG
CCCGAGCCCCTGGACCTAGTGCAGCTGGTGTGGTGGGACTTTGCCGCGGCCGACCCGCTG
CCGGTCCTCAAGGCGCTGCAGAGGATGGCCACGGACCAGCTGCAGGTGGATGAGGACAGC
GGCGAGGTGTCAGTGTCGGAGCCCAAGAAGATCCGCGGCATCGGGCTGGTGGACTTCCCA
GCGGATCGGCTCAAGGCCGCTATCCAGGCGGGCGTGCCCATCACCTGCGTGCAGGTGGAG
CACTCGGTGCTGGTGCGCAGCGCGCAGCCTGTGCTGGACCTGTGCGCCAAGTACGGCATC
AAGGTGCTGGCACGCGGCGGCACACTGGGTGGCCTGCTGTCCGCCAAGTACCTGGGCGCG
CCGCCGCCCGACCCGGTGCGCGGCGACGCCGACCTGGACTCGGTGCCGGGGTGCCTGGAC
GCCGTGAACAACGTGGGCGGCTGGGCGCGGCTGCAGGCGGCGCTGGCCGTGATCAAAGGC
ATCGCGGACAAGCACGGCGTCAAGCCGGAGACGGTGGCGCTGCGCTGGCAGATCGACGCC
GGCTGCTTCCCGCTGGTCACGACCAGGTGGTCGTCCCGCGTGTGGCGGCAGTTCGGGTAC
GAGGGCTGGTCCAGCTTCGAGGTGAGCGGCGGCCGCCCGGGTGTGGACGGGCCGCTGTTC
CAGGTGGAGTCGTTTCTGGACGTGGAGGACGTGCGGGCGCTGGCGGGGCTGGCGGCGGTG
CACTGA

Peptide Sequence

PEP ID

Cre12.g544000.t1.2
PEP Infomation

pacid=30793444 transcript=Cre12.g544000.t1.2 locus=Cre12.g544000 ID=Cre12.g544000.t1.2.v5.5 annot-version=v5.6
Sequence

MSEPGEEPVAAPAGPAPDPVLNELYGSERPAVELLPGVPLSPIVNSCWLPADAKAMLAES
WIPVPPEDAGEEAGPPPPAFEAAAPEYNELVRRLAKTAPFRKWNELTIQAKQLEQEVAGL
KGPDAEAKQAELENVKVQIADAEAAVAEVKQSFSDDPLSLTGWMQALTDLADGGMTTFEV
SGQGWPYCSLRQLFGEMPSAAPPAGFFDGVERVLGTFKRRYEKERGPGSVQLMLKLAPNV
FSDAWSTGGAPAAVAAVEAYVERARANVFGPDGGVTPEGVPEPLDLVQLVWWDFAAADPL
PVLKALQRMATDQLQVDEDSGEVSVSEPKKIRGIGLVDFPADRLKAAIQAGVPITCVQVE
HSVLVRSAQPVLDLCAKYGIKVLARGGTLGGLLSAKYLGAPPPDPVRGDADLDSVPGCLD
AVNNVGGWARLQAALAVIKGIADKHGVKPETVALRWQIDAGCFPLVTTRWSSRVWRQFGY
EGWSSFEVSGGRPGVDGPLFQVESFLDVEDVRALAGLAAVH*

Transcript Sequence

Transcript ID

Cre12.g544000.t1.2
Transcript Infomation

pacid=30793444 locus=Cre12.g544000 annot-version=v5.6
Sequence

CAGGAGCCCGACCTTAACGGCTGACTCCATGTTGCGCTGACTGGCCCCGCAGGCTCAACT
TAGAACCACAACGATGGTGGCGGTCGCAGCCGTATGAATAGAATAATACAAAGTGGGCCT
TTTTGCACGTCCCATTATCTTACACGGAACATACTGATTTCGGCCTTTGAGGCGACTTGT
TTTGCTCCGCCGGAACAGCGAACAAGTGCAGCGTTTATAAACAGCACTATTTACTGTGCA
TAAAGCAGAATGTCTGAGCCGGGCGAGGAGCCCGTCGCTGCTCCTGCGGGACCGGCTCCG
GACCCAGTGCTCAATGAGCTATATGGATCGGAGCGACCTGCTGTGGAGCTATTACCAGGA
GTTCCTCTGTCACCAATTGTAAACTCCTGTTGGCTTCCAGCAGATGCCAAGGCGATGCTG
GCGGAAAGCTGGATTCCCGTCCCACCGGAGGACGCGGGCGAGGAGGCAGGCCCCCCACCC
CCTGCGTTCGAGGCCGCTGCGCCCGAGTACAACGAGCTGGTACGGAGGCTTGCAAAGACA
GCTCCCTTTCGCAAGTGGAATGAGTTAACAATCCAGGCGAAGCAACTGGAGCAGGAGGTT
GCGGGGCTCAAAGGACCTGACGCAGAGGCCAAGCAGGCGGAGCTTGAGAACGTCAAGGTG
CAGATTGCGGACGCAGAGGCGGCGGTGGCGGAGGTGAAGCAATCGTTCAGCGACGACCCG
CTGTCGCTGACGGGCTGGATGCAAGCACTGACGGACCTGGCGGACGGGGGGATGACCACG
TTTGAGGTGAGCGGCCAGGGCTGGCCTTACTGCTCTTTGCGGCAGCTGTTCGGCGAGATG
CCGTCCGCGGCGCCGCCCGCGGGCTTCTTCGACGGCGTGGAGCGTGTGCTGGGCACCTTC
AAGCGGAGGTACGAGAAGGAGCGCGGGCCGGGCAGCGTTCAGCTCATGCTCAAGCTCGCG
CCCAACGTGTTCTCCGACGCCTGGTCCACTggcggcgcgcccgccgcggtggccgcggTG
GAGGCGTACGTGGAGCGCGCTCGTGCCAACGTGTTCGGCCCCGATGGCGGCGTGACGCCC
GAGGGAGTGCCCGAGCCCCTGGACCTAGTGCAGCTGGTGTGGTGGGACTTTGCCGCGGCC
GACCCGCTGCCGGTCCTCAAGGCGCTGCAGAGGATGGCCACGGACCAGCTGCAGGTGGAT
GAGGACAGCGGCGAGGTGTCAGTGTCGGAGCCCAAGAAGATCCGCGGCATCGGGCTGGTG
GACTTCCCAGCGGATCGGCTCAAGGCCGCTATCCAGGCGGGCGTGCCCATCACCTGCGTG
CAGGTGGAGCACTCGGTGCTGGTGCGCAGCGCGCAGCCTGTGCTGGACCTGTGCGCCAAG
TACGGCATCAAGGTGCTGGCACGCGGCGGCACACTGGGTGGCCTGCTGTCCGCCAAGTAC
CTGGGCGCGCCGCCGCCCGACCCGGTGCGCGGCGACGCCGACCTGGACTCGGTGCCGGGG
TGCCTGGACGCCGTGAACAACGTGGGCGGCTGGGCGCGGCTGCAGGCGGCGCTGGCCGTG
ATCAAAGGCATCGCGGACAAGCACGGCGTCAAGCCGGAGACGGTGGCGCTGCGCTGGCAG
ATCGACGCCGGCTGCTTCCCGCTGGTCACGACCAGGTGGTCGTCCCGCGTGTGGCGGCAG
TTCGGGTACGAGGGCTGGTCCAGCTTCGAGGTGAGCGGCGGCCGCCCGGGTGTGGACGGG
CCGCTGTTCCAGGTGGAGTCGTTTCTGGACGTGGAGGACGTGCGGGCGCTGGCGGGGCTG
GCGGCGGTGCACTGAGGCCCGAAGGCTGGCTGAGGCACTGCGTGTTTGGAACTAAAGCGA
GGGGCTGAGGCTGTGTGGCACGTGGCATGTGGCAGAAGGGGTGTTGAAGGAGGTAGAGGC
CACGTCATGACTATGGCGACGGCTGGGGTAGGACTGGGCAGGGCGGTCGGCAGGTCGCGG
CTTCTGGAGCTCACCACGGATGCAGGCAGATGCAGTGGCCGCAACTGGTAGTGCGTTGGA
AGGTGTGGTGTGGGAGCTCCGATAGTGCACACGGTTTGCAGCGAGGATGCGGGAGATTGG
AGAACGCCCGTCTGCCAATGAGGTGGGCTACCGGCCACAAACGAACATGTGTGTGTGTAA
CTTGTACGGGTATGGGTACTTCGCATGGTTGTAATGCGCTGGATGTCAATCACTTGATCT
GGATGTGCGCACGGACAAGTCTGCGCATGAGCGGCATGCACACAACTCTGGCTGGAGGAA
CACCTTGAAGCTCGCTTGGCATGTACCCTTCTCCGCGTCCTTTGCATGCGTGCACGGCAT
TAGGCTCGATGCCGACAGTCCACCCACCTGCAACGGTTCATGCACGAGTAACTACACGGC
GAAACCTACAACGCCCG