Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g541100.t1.2
CDS Infomation

pacid=30793214 polypeptide=Cre12.g541100.t1.2 locus=Cre12.g541100 ID=Cre12.g541100.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCGACCACCTACCGAGCCGCTTTCGGCAACGCGGAGCACCACAAGGCGGTGATCCAA
GAGCTGTGCGGTAAGCTAGGCCTGCCCGTGCCAGGGCCCAAGCCCCGCCCGGACACCAGT
GGTGACTCGGAGCTGGCACACCAGATGGCGGAGGACGAGCGGCGGGCCGCGGGCTATGCC
GTCCCGCGGCCCGACGTGACGACGTCTCCCTCGAATGTAAAGGTCCAGATGGTGGGCTCC
GGCGGGGCCCCCGGCATGCACTTCAACTCGCTGGTCCCGCCCGGCGCGCGGCACCAACGC
AGCTACTCTGACGGGAGCGCGCGGCTGGTGCAGCAGCAACATTTGCAACAACAGCAGCAG
CAGCAACAACAACAACAGCAACAGCAAGGGGACCAGCAACCAGAAAAGCTGCAGCATCGG
CACTCCCTGCTGATGCCGGACATCCGGCGGAGCAGCGGCGGCGGCACACAAGCGCCCGCG
GCGGGGCGCGAACCAGCTCCCGCGGGCGCGAGTGGCGCCGGCACTGCCGCTGCTGCTGCG
GCTGCTGCGGGTGCTGCTGCCGGCCTCCCGCGGCCTCCGGCTGGTGCGTTTGCGAACGCC
CGGCATCAGCAGGTGGTGAGCGATGCGGAGTTGGCGGCGCGGCTGCAGCAGGTGGAGATG
GCGGCGGTGGCGGATGCGACAGGCACGCCGCAGAGCCTGTTGTTCCCGGACCTGCAGTCG
CAGCCGTCCATGCGCGAGCTGGCGCTGGGCCGCACGCTCAGCTGCGTGCCGTCTGTGATG
ATGTCACCGCAAATGATGATGTCGGCCGCCACTGTGCCGCCGCCGGAGCCGGTGGTCAGC
GCGGACCGGCGGCGGCTGCAGGACACGCTGCGGTTGTACGAACTGACGGAGCGGCAGGTG
GCGGGCGACGGCAACTGCCAGTTCCGGGCGCTGTCGGACCAGCTGTACGACAACCCCGAG
CTCCACGCCGAGGTGCGGCGGGCGGTGGTGGCGGTGCTGCGGCAGCGCGCCGCCGCCTAC
AGCTGCTACGTGGCGGGGGACTACCAGGCCTACGCGGACGGCATGGCGCGGGCCGGCACC
TGGGGAGACCACCTCACGCTGCAGGCCGCGGCCGACACGTACGGCGTGCGGCTGGTGGTG
GTGACCAGCTACGAGCACAGCCCCGTCATCACGCTCGAGCCGGAGCAGAAGAAGAGCGGC
CGCACGCTGTTCCTCAGCTTCTGGGCCGAGGTGCACTACAACAGCCTCTACCCGGCCAAG
GAGCCGCCAGCGCCCCTGCCGCGGCCCAGCGCCCCCGCCGCGGCGGTGACGGCGACCAGC
AAGCGCGCCTCCGGAAACGGCGGCGGCAAGGACGGCGGCAAGCCGCACAAAGTGCTGGGC
AGCCGCAAGCTGGGGCAGCTGTTCAACGTGTAG

Peptide Sequence

PEP ID

Cre12.g541100.t1.2
PEP Infomation

pacid=30793214 transcript=Cre12.g541100.t1.2 locus=Cre12.g541100 ID=Cre12.g541100.t1.2.v5.5 annot-version=v5.6
Sequence

MATTYRAAFGNAEHHKAVIQELCGKLGLPVPGPKPRPDTSGDSELAHQMAEDERRAAGYA
VPRPDVTTSPSNVKVQMVGSGGAPGMHFNSLVPPGARHQRSYSDGSARLVQQQHLQQQQQ
QQQQQQQQQGDQQPEKLQHRHSLLMPDIRRSSGGGTQAPAAGREPAPAGASGAGTAAAAA
AAAGAAAGLPRPPAGAFANARHQQVVSDAELAARLQQVEMAAVADATGTPQSLLFPDLQS
QPSMRELALGRTLSCVPSVMMSPQMMMSAATVPPPEPVVSADRRRLQDTLRLYELTERQV
AGDGNCQFRALSDQLYDNPELHAEVRRAVVAVLRQRAAAYSCYVAGDYQAYADGMARAGT
WGDHLTLQAAADTYGVRLVVVTSYEHSPVITLEPEQKKSGRTLFLSFWAEVHYNSLYPAK
EPPAPLPRPSAPAAAVTATSKRASGNGGGKDGGKPHKVLGSRKLGQLFNV*

Transcript Sequence

Transcript ID

Cre12.g541100.t1.2
Transcript Infomation

pacid=30793214 locus=Cre12.g541100 annot-version=v5.6
Sequence

CTTGAAACACATATACGCCTACATTCAAAAGGCATGCATACTGGGCCTCACCGACACCTC
ACATCGTCAATCGATAGGACGCTGACGAGCGTTCCCCCAGCTTCTCGGCACTCCATGGAT
GTGCACCGTTGCTCAGAGCTTTGATAATACACAAGACACAAGCGCATAGGGTTGTATTGA
ACGCCGAGGAGCCAACTGCTCCTACTCACTCGTGTGTGCGTGCCGCATCGGCTCACGCAC
CGATGGCGACCACCTACCGAGCCGCTTTCGGCAACGCGGAGCACCACAAGGCGGTGATCC
AAGAGCTGTGCGGTAAGCTAGGCCTGCCCGTGCCAGGGCCCAAGCCCCGCCCGGACACCA
GTGGTGACTCGGAGCTGGCACACCAGATGGCGGAGGACGAGCGGCGGGCCGCGGGCTATG
CCGTCCCGCGGCCCGACGTGACGACGTCTCCCTCGAATGTAAAGGTCCAGATGGTGGGCT
CCGGCGGGGCCCCCGGCATGCACTTCAACTCGCTGGTCCCGCCCGGCGCGCGGCACCAAC
GCAGCTACTCTGACGGGAGCGCGCGgctggtgcagcagcaacatttgcaacaacagcagc
agcagcaacaacaacaacagcaacagcaaggggaccagcaaccagaaaagctgcagcatc
ggcaCTCCCTGCTGATGCCGGACATCCGGCGGAGCAGCGGCGGCGGCACACAAGCGCCCG
CGGCGGGGCGCGAACCAGCTCCCGCGGGCGCGAGTGGCGCCGGCActgccgctgctgctg
cggctgctgcgggtgctgctgcCGGCCTCCCGCGGCCTCCGGCTGGTGCGTTTGCGAACG
CCCGGCATCAGCAGGTGGTGAGCGATgcggagttggcggcgcggctgcagcaggtggaga
tggcggcggtggcggatgcgacaggcacgccgcagaGCCTGTTGTTCCCGGACCTGCAGT
CGCAGCCGTCCATGCGCGAGCTGGCGCTGGGCCGCACGCTCAGCTGCGTGCCGTCTGTGA
TGATGTCACCGCAAATGATGATGTCGGCCGCCACTGTGCCGCCGCCGGAGCCGGTGGTCA
GCGCGGACCGGCGGCGGCTGCAGGACACGCTGCGGTTGTACGAACTGACGGAGCGGCAGG
TGGCGGGCGACGGCAACTGCCAGTTCCGGGCGCTGTCGGACCAGCTGTACGACAACCCCG
AGCTCCACGCCGAGGTGCGGCGGGCGGTGGTGGCGGTGCTGCGGCAGCGCGCCGCCGCCT
ACAGCTGCTACGTGGCGGGGGACTACCAGGCCTACGCGGACGGCATGGCGCGGGCCGGCA
CCTGGGGAGACCACCTCACGCTGCAGGCCGCGGCCGACACGTACGGCGTGCGGCTGGTGG
TGGTGACCAGCTACGAGCACAGCCCCGTCATCACGCTCGAGCCGGAGCAGAAGAAGAGCG
GCCGCACGCTGTTCCTCAGCTTCTGGGCCGAGGTGCACTACAACAGCCTCTACCCGGCCA
AGGAGCCGCCAgcgcccctgccgcggcccagcgcccccgccgcggcggTGACGGCGACCA
GCAAGCGCGCCTCCGGAAACGGCGGCGGCAAGGACGGCGGCAAGCCGCACAAAGTGCTGG
GCAGCCGCAAGCTGGGGCAGCTGTTCAACGTGTAGACTGTGCGGGTGTGGCGCAGGGGTG
CAGCGGTGCGGTGCGGCGTGGTGGGCTGCAGATGTGGCGCCGCTGTTAGTCGGTAGGGTG
AATGTTGTAGGGCTTGTGTAGGTCTGCTGAGGAAGGCAGGATTGGAGCCCGGTCTCGGGT
TGCGTGTATATAGCGGAGTGGACTTCTGGCGGGATGAGTGCGGCACAGAACAACTGTGAT
AAATTTGAGTGCTGAGAAGATGGGTGGCACAGCGCTCGCATGCATGTTCGTACCACTGGT
GTGCTGTGGTCATGTGGGCGTGAAGCTGCGGCCAGGCCAAGAGTGGCGCTGTCCTGCATA
CAGAGTGAACAGCTATAGACTTCATCCGTGCCCTGAAGGTGCGTTCGGTTTGTACCAATA
CTAGAACAGAAggtgcgatgggacagggtaaggggcaggttggcgtagtcccgtagtatg
cagcacattctcagaAATACTAGAACAGTATGTTAGGTTGGGCCAGAGGTAGGAGGCGAG
GCTACGCAGGCACTGCGATAGGACAGCTATGCAGCAATTCGTTCTTCGCCCTGTGGAGCT
GCTAGCCGCTTTGAGGGGCAGGGTCATGCTGAGTCGTGTTGGTTTGACCTTCATGCACTT
TGCACATTGCGCCCAGGCAGCGCCGCGCATTCACGTATGCGTTGGGCTCTGCGGCTAAGC
AGCCAGCAGGAGGGCCTGCAATGGTGCCAGGCTACAAGCTTGATACCGTATGTGGATTGT
ATACGGGCTGTGGTGTTTGCAGATCTCCGAGCGCAGAGGCGCGGTACAGGCAATCGCATG
TAACCAAAGTATCTC