Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g540500.t1.2
CDS Infomation

pacid=30792634 polypeptide=Cre12.g540500.t1.2 locus=Cre12.g540500 ID=Cre12.g540500.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCAAAACCCCAAGAGGACTTCCTCGACAAGACCTCACGGTTCTTGGCCAAGCGCGAG
GGTATTGATAAGACGCTTAAACTCCTCCGATATACAGCCAGACTCGTTGTATCTCTTCAA
CCAAAGGACCAGGAGCTGACGAAGCGGCTGGCAGCCTTCGAGAAGAGCGTCGGCGTGTCG
CGAAAAGCGTTCCGTCTGGGCAAGTTTCTGCAAGACGTCAACAGCTTGCGCCACAGCCAA
ACCAAGGACGCGCAATTCGTGCTTGAGCTGGTCGCGTATGGGGGCGAGGGCATCTACTAC
TTCCTGGAGCAGTTTACATGGCTCGTAAAGACCGGGGCGCTAAGCAAGGACCTGGAGGAG
CGGCTGGCGTACGCGTCGGCCCTTGCGGAGCTGGTGGGCTACGCAGGGAACATCTGGCTG
TCATTCCTGAAGCTGCAGAAGCTCATGCAGCAGGAGCGCGAGGTGGAGGCGACAATCACC
AAGACATGCAAGGAGGAGGGCGTGACGGACTCGGCTCTTGAGGCCAAGCTGGGGGCGGTG
CGCTTCCAGCGGCGGCTGCGCACCGCCTTCATCGTGCAGGACCTGGCGGACAGCGTCATG
GCGCTCAACGACGTGGCGGGTGGCAAGATCCGCGGCATCAGCAGCCCGGTGGTGCTGGCG
CTGGCGGGGCTGACGTCAGGCAGCATCAGCTTCTACAAGAACTGGAACCTGTAG

Peptide Sequence

PEP ID

Cre12.g540500.t1.2
PEP Infomation

pacid=30792634 transcript=Cre12.g540500.t1.2 locus=Cre12.g540500 ID=Cre12.g540500.t1.2.v5.5 annot-version=v5.6
Sequence

MSKPQEDFLDKTSRFLAKREGIDKTLKLLRYTARLVVSLQPKDQELTKRLAAFEKSVGVS
RKAFRLGKFLQDVNSLRHSQTKDAQFVLELVAYGGEGIYYFLEQFTWLVKTGALSKDLEE
RLAYASALAELVGYAGNIWLSFLKLQKLMQQEREVEATITKTCKEEGVTDSALEAKLGAV
RFQRRLRTAFIVQDLADSVMALNDVAGGKIRGISSPVVLALAGLTSGSISFYKNWNL*

Transcript Sequence

Transcript ID

Cre12.g540500.t1.2
Transcript Infomation

pacid=30792634 locus=Cre12.g540500 annot-version=v5.6
Sequence

ATCTTGATACTTTGAGAGGGACAACATATAGAAACTCACAACAATGTCAAAACCCCAAGA
GGACTTCCTCGACAAGACCTCACGGTTCTTGGCCAAGCGCGAGGGTATTGATAAGACGCT
TAAACTCCTCCGATATACAGCCAGACTCGTTGTATCTCTTCAACCAAAGGACCAGGAGCT
GACGAAGCGGCTGGCAGCCTTCGAGAAGAGCGTCGGCGTGTCGCGAAAAGCGTTCCGTCT
GGGCAAGTTTCTGCAAGACGTCAACAGCTTGCGCCACAGCCAAACCAAGGACGCGCAATT
CGTGCTTGAGCTGGTCGCGTATGGGGGCGAGGGCATCTACTACTTCCTGGAGCAGTTTAC
ATGGCTCGTAAAGACCGGGGCGCTAAGCAAGGACCTGGAGGAGCGGCTGGCGTACGCGTC
GGCCCTTGCGGAGCTGGTGGGCTACGCAGGGAACATCTGGCTGTCATTCCTGAAGCTGCA
GAAGCTCATGCAGCAGGAGCGCGAGGTGGAGGCGACAATCACCAAGACATGCAAGGAGGA
GGGCGTGACGGACTCGGCTCTTGAGGCCAAGCTGGGGGCGGTGCGCTTCCAGCGGCGGCT
GCGCACCGCCTTCATCGTGCAGGACCTGGCGGACAGCGTCATGGCGCTCAACGACGTGGC
GGgtggcaagatccgcggcatcagcagcccggtggtgctggcgctggcggggctgacgtc
aggcagcatcagcttctacaagaactggaacctgtagggcgtgtagctaggtgacacggc
agtagcggcagcaggagcgacagcagcggcagtagcaggagctgcggcggcaggAGGTGT
GTGCTCGATGTCGGGTGGGCCGTGCAGCGGCAGCACGTGTCGAAGGAAGGACGGTAGGTC
CTCCGGACGGAGCCAATTGCCCCCAGGGCAGCGGTCCAGGGGCTGATAGCGGGCCGTGTG
CGTGGCGGTGTGCGGGGAGTGCCGTGCTGCATCACGGGTGGGCGGTTGGTGACATGGTAC
CGTGGTGGGAAATGGATTCAAGAATTTGCTTTATTATCACCATGGACTGTTATTGACTTG
GCTTGCTGTATTTGCTGTTGGACCAGACGGCGACGCGAAGCGGGTGAGGCCGCGCGCGAG
TGCGGGGATGTCGCTGCGCTGGTGATTGGACAAGGGCAAGGAAGCGGGCCGCCACTGCCC
TGGGGCGGGCGGCGTGTCGTGGGGCTCACGTGTGGGGGGGCATGCCATGACCGTTCGGAG
GTGACTCGTGCTCGCAGGATGTGGCTGGTAGGACTGATGCGAGCGGCTGCAATATGCCAC
CTGCTGCGCGAACCTGGAGGCCGGCAATGCGCAGGCAGGGAAGAGGGTGCACGACACGGC
TTGCACGTATGTGTGGACACCCTTGCGCATATTACAACTGCCCGGCAGCAGCCCCCTGCC
CCCTTCTTTGACTCGTACAATATGGTAGCCAAGCAATTGCAGCCTTGTACCGGTATGCTG
CTGACGATAATCCAGCTCTTGACGCAAGGGCCTTGGGACTAGGGGCTAGTGCAGACCTAC
GCAGTACAACACCTCTAACGCCTCTCTCGTTCA