Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g540400.t1.2
CDS Infomation

pacid=30793202 polypeptide=Cre12.g540400.t1.2 locus=Cre12.g540400 ID=Cre12.g540400.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCTGCAAGCACGCTCGGGGATGCGCAGCAGGTCGAATCCTTTGTGCACCAGCTCATA
AATCCTGCGACACGCGAGAATGCGTTGTTGGAGCTGAGCAAGAAGCGGGAGAATTTCCCG
GAGCTTGCGCCCTACCTCTGGCACTCCTTCGGGGCAATCGCGGCGCTGCTTCAGGAGATC
GTGGCCATTTACCCGCTGCTCTCGCCGCCGTCGTTGACAGCACATGCATCAAATCGCGTG
TGCAATGCTCTGGCGCTGCTGCAATGCGTGGCGTCTCACAATGAGACGAGGGCACTGTTC
CTCCAAGCGCACATCCCGCTCTTCCTGTACCCCTTCCTCCAAACCATGAGCAAAACGCGG
CCGTTCGAGTACCTGCGCCTGACCAGCCTGGGCGTGATCGGCGCGCTGGTCAAGGTGGAC
GACACGGACGTGATCAACTTCCTGCTGTCCACCGAGATCATCCCGCTGTGCCTGCGCACC
ATGGAGATCGGCACGGAGCTGTCCAAGACCGTGGCCACCTTCATCGTGCAGAAGATCCTG
CTGGACGACGTGGGCCTGAACTACATCTGCGCCACTGCCGAGCGCTTCTTCGCGGTGGGC
GCCGTGCTGGGCAACATGGTGGTGGCGCAGGCGCAGATGGTGGACCAGCCCAGCCAGCGG
CTGCTCAAGCACATCATCCGCTGCTACCTGCGCCTGTCCGACAACCCGCGCGCGCGCGAG
GCGCTGCGGTCCTGCCTGCCGGAGCTGCTGCGCAACACGCAGTTCACGGCGTGCCTGAAG
AACGACGACACCACGCGCAGGTGGCTGGCGCAGCTGCTCATGAACGTGGGCTTCTCCGAC
TCCGCCGCGGCACTGGGTGCGCCCGACGTGGTGCAGCCATCGCCCGTCATGGGCGCGTGA

Peptide Sequence

PEP ID

Cre12.g540400.t1.2
PEP Infomation

pacid=30793202 transcript=Cre12.g540400.t1.2 locus=Cre12.g540400 ID=Cre12.g540400.t1.2.v5.5 annot-version=v5.6
Sequence

MAASTLGDAQQVESFVHQLINPATRENALLELSKKRENFPELAPYLWHSFGAIAALLQEI
VAIYPLLSPPSLTAHASNRVCNALALLQCVASHNETRALFLQAHIPLFLYPFLQTMSKTR
PFEYLRLTSLGVIGALVKVDDTDVINFLLSTEIIPLCLRTMEIGTELSKTVATFIVQKIL
LDDVGLNYICATAERFFAVGAVLGNMVVAQAQMVDQPSQRLLKHIIRCYLRLSDNPRARE
ALRSCLPELLRNTQFTACLKNDDTTRRWLAQLLMNVGFSDSAAALGAPDVVQPSPVMGA*

Transcript Sequence

Transcript ID

Cre12.g540400.t1.2
Transcript Infomation

pacid=30793202 locus=Cre12.g540400 annot-version=v5.6
Sequence

CTAGCTCCTAGCCAAAACGATCTGAATTGTTACCTCTTCCTCGCGACTCAGCACCTAGCG
CTATCTTGCTTTTTGTCACTGTCCAGCTGCCCTTGCACGCGCCTACTGTAACGTACCTGT
ATCGGGGGCCTAAACCTTGCTAGCCTGAGGTTGTCGTGCGCTCCTCGCCTTGGTCTCCGG
CCGGGCCTAGCAATTTTCGCGCTCTAGCGCTGATTCGCGCGCCCGCCGCTGCCCTTGGCC
TATTTTGTTTCAAAAGGGCCAACTGGCCCTAGAACTAATGGCTGCAAGCACGCTCGGGGA
TGCGCAGCAGGTCGAATCCTTTGTGCACCAGCTCATAAATCCTGCGACACGCGAGAATGC
GTTGTTGGAGCTGAGCAAGAAGCGGGAGAATTTCCCGGAGCTTGCGCCCTACCTCTGGCA
CTCCTTCGGGGCAATCGCGGCGCTGCTTCAGGAGATCGTGGCCATTTACCCGCTGCTCTC
GCCGCCGTCGTTGACAGCACATGCATCAAATCGCGTGTGCAATGCTCTGGCGCTGCTGCA
ATGCGTGGCGTCTCACAATGAGACGAGGGCACTGTTCCTCCAAGCGCACATCCCGCTCTT
CCTGTACCCCTTCCTCCAAACCATGAGCAAAACGCGGCCGTTCGAGTACCTGCGCCTGAC
CAGCCTGGGCGTGATCGGCGCGCTGGTCAAGGTGGACGACACGGACGTGATCAACTTCCT
GCTGTCCACCGAGATCATCCCGCTGTGCCTGCGCACCATGGAGATCGGCACGGAGCTGTC
CAAGACCGTGGCCACCTTCATCGTGCAGAAGATCCTGCTGGACGACGTGGGCCTGAACTA
CATCTGCGCCACTGCCGAGCGCTTCTTCGCGGTGGGCGCCGTGCTGGGCAACATGGTGGT
GGCGCAGGCGCAGATGGTGGACCAGCCCAGCCAGCGGCTGCTCAAGCACATCATCCGCTG
CTACCTGCGCCTGTCCGACAACCCGCGCGCGCGCGAGGCGCTGCGGTCCTGCCTGCCGGA
GCTGCTGCGCAACACGCAGTTCACGGCGTGCCTGAAGAACGACGACACCACGCGCAGGTG
GCTGGCGCAGCTGCTCATGAACGTGGGCTTCTCCGACTCCGCCGCGGCACTGGGTGCGCC
CGACGTGGTGCAGCCATCGCCCGTCATGGGCGCGTGAGGGGCGTGAGGGGCCTGGCCTGG
CGCTCCCGCTGCCGCCCGCTCGGTTGGCCGCGGGCCAGACCCACCCCGCCCTGACACGCG
CTTGGCGAGGGTTGGGCAGGAGCCAGGGCCGCGGCAGGCAAAGCTGGAGGCGGAGCAGTG
ATGCGCGGGTCCATACAGGGCCTTGGTGGTGTATCGGGGCGAGCCAAAAGGAGTGGGGAG
CCGTGGTCGGGGCGCGTGGGTGCGCCCATTGCGTCTGTGCTCTGCACTAGGTGGTAGACA
CCGCTGCTGCACTACGGGCGCAGACCGGTGGCGGTGTGCTGGGTCCATGTGGGGGCCGGG
GGCCTCCGGGTCCTGTCGGTCGCTGCATGCGGCACAGGGCGGCTGAAGCACAGCCACTAG
GACACATCGGGCATGGCTGGACGCCGATGCGTGTGATCCATGTGTGTGAGCCGGGGCAAG
GAGCTCAGGGAGGTTGGGGCGCGGGTGGGTGTGCGGGGAGGAAGGCGCAGTGGCTAGGGT
GCGGAGAGGGTGAAGGGAGGCGGTCGGCTGGGTGCCACTACGGCATGAGGCGCCGCATCC
CGCGCATGCCCGCAGTATCTAAGCATGCTCGGCGACGAGCCACAAGCTGTGCGTGCACTG
ACTTTGCATGTAAAGCCCAGCCGAG