Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g538450.t1.2
CDS Infomation

pacid=30792991 polypeptide=Cre12.g538450.t1.2 locus=Cre12.g538450 ID=Cre12.g538450.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGTCAAGGTCCTGTCGCCTCGCGCCCTGGAGGGCTTGAAGAACTATGTATACAAGCCA
GGCGGCTACACATGGCTGGACCACGCGCATACTCCCTTTTGGAACTGGTTGACTGCCCAG
CTGCCGATGTGGCTGGCGCCGAACCTCATCACGCTAGTGGGCCTCATAGTGACGTTCATC
GCGTATGGCACTATGTGGTACTATCTCCCGGAGTACACAGGTGAGGGCCCGCGCTGGCCC
TACTTCTTCGCGGGCGTGTCCATTCTGGTTTACACCAACCTGGACTGCATCGACGGCAAG
CAGGCGCGGCGCACCGGCACCAGCAGTCCCCTGGGGCAGCTGTTCGACCACGGCTGCGAC
GCCGTCGCGCTGCACGTGATGCTGTCGCTGGTGCAGGCCTCGCTGGCGGAGCCGCCGTCC
GTGTTCGCCAGCGTGGCGGCCATGTCGGTGTATCTGCCCTGGTGGGTGAGCCACTGGGAG
GAGTACCACACGGGCGTGCTCATGTACGGCGACGGCAACTTCGGCATCCTGGAGGCCAAC
TACGTACTGGCGCTGGTCACCTTCATCACCGGCACCTTCGGGCCGGCCATGTGGGACACG
CCCATGCGCTCCATCGTGCCCGTGTTTCCGTGGGACACATCTGTGAAGCACGCGTTCATC
GTGTTCGCCATGTGCATCGCGCTCATCCAGAACTACGGCCAGCTGTACCGCGTGTTCTCA
CGGCACTGGACCATGCTGCCTGAGGCGGAGCGCGGTCACAAGGAGCTGGGCAACGCCTCC
CGGCTGACGCACCTGGCCTCGGGCGCGGCGCTCATCTTCCTGGGGGCCGTGTACCTGGCC
GACAACAAGCTGCAGCCGGGGCAGGCCAGGCTGGCGGGGCTGCTGTACGGGCTGGTGTAC
GCCATCGTGGCCACGCAGCTCATCATGGACCACATGTGCAAGGAGCCCTTCAGGTCGCCG
CTGCTGCCGCTGGCGGTGCTGACGGTGGCCGCCGCCAACAGCGTGCTGCAGCTGGTGGAC
GCGCGGGCCACGGCGGCCACGCTGGCGGGCGCCATGATTGTGTACTACCTGGTGTACGTC
ACGACCATTGTGGACCAGGTGTGTGCCTACCTGGGGATAAAGTGCCTCACCATCACGCCC
AAGCGCGCGTGA

Peptide Sequence

PEP ID

Cre12.g538450.t1.2
PEP Infomation

pacid=30792991 transcript=Cre12.g538450.t1.2 locus=Cre12.g538450 ID=Cre12.g538450.t1.2.v5.5 annot-version=v5.6
Sequence

MVKVLSPRALEGLKNYVYKPGGYTWLDHAHTPFWNWLTAQLPMWLAPNLITLVGLIVTFI
AYGTMWYYLPEYTGEGPRWPYFFAGVSILVYTNLDCIDGKQARRTGTSSPLGQLFDHGCD
AVALHVMLSLVQASLAEPPSVFASVAAMSVYLPWWVSHWEEYHTGVLMYGDGNFGILEAN
YVLALVTFITGTFGPAMWDTPMRSIVPVFPWDTSVKHAFIVFAMCIALIQNYGQLYRVFS
RHWTMLPEAERGHKELGNASRLTHLASGAALIFLGAVYLADNKLQPGQARLAGLLYGLVY
AIVATQLIMDHMCKEPFRSPLLPLAVLTVAAANSVLQLVDARATAATLAGAMIVYYLVYV
TTIVDQVCAYLGIKCLTITPKRA*

Transcript Sequence

Transcript ID

Cre12.g538450.t1.2
Transcript Infomation

pacid=30792991 locus=Cre12.g538450 annot-version=v5.6
Sequence

GTATCCCCTCAAATACCAATACTTTGCTACCAGCTCGAGAACTCCCGCCTTGAACTAAAC
TTTGTTCCGCCGTGCAGACTGGTCCGTCCTACTTTGCGATTAGGGCAAAGTTTTGAATAT
CAATGGTTTAAAAATACAATAAAGCGAGAGCTAGAACTCCAGGCAGAAATGGTCAAGGTC
CTGTCGCCTCGCGCCCTGGAGGGCTTGAAGAACTATGTATACAAGCCAGGCGGCTACACA
TGGCTGGACCACGCGCATACTCCCTTTTGGAACTGGTTGACTGCCCAGCTGCCGATGTGG
CTGGCGCCGAACCTCATCACGCTAGTGGGCCTCATAGTGACGTTCATCGCGTATGGCACT
ATGTGGTACTATCTCCCGGAGTACACAGGTGAGGGCCCGCGCTGGCCCTACTTCTTCGCG
GGCGTGTCCATTCTGGTTTACACCAACCTGGACTGCATCGACGGCAAGCAGGCGCGGCGC
ACCGGCACCAGCAGTCCCCTGGGGCAGCTGTTCGACCACGGCTGCGACGCCGTCGCGCTG
CACGTGATGCTGTCGCTGGTGCAGGCCTCGCTGGCGGAGCCGCCGTCCGTGTTCGCCAGC
GTGGCGGCCATGTCGGTGTATCTGCCCTGGTGGGTGAGCCACTGGGAGGAGTACCACACG
GGCGTGCTCATGTACGGCGACGGCAACTTCGGCATCCTGGAGGCCAACTACGTACTGGCG
CTGGTCACCTTCATCACCGGCACCTTCGGGCCGGCCATGTGGGACACGCCCATGCGCTCC
ATCGTGCCCGTGTTTCCGTGGGACACATCTGTGAAGCACGCGTTCATCGTGTTCGCCATG
TGCATCGCGCTCATCCAGAACTACGGCCAGCTGTACCGCGTGTTCTCACGGCACTGGACC
ATGCTGCCTGAGGCGGAGCGCGGTCACAAGGAGCTGGGCAACGCCTCCCGGCTGACGCAC
CTGGCCTCGGGCGCGGCGCTCATCTTCCTGGGGGCCGTGTACCTGGCCGACAACAAGCTG
CAGCCGGGGCAGGCCAGGCTGGCGGGGCTGCTGTACGGGCTGGTGTACGCCATCGTGGCC
ACGCAGCTCATCATGGACCACATGTGCAAGGAGCCCTTCAGGTCGCCGCTGCTGCCGCTG
GCGGTGCTGACGGTGGCCGCCGCCAACAGCGTGCTGCAGCTGGTGGACGCGCGGGCCACG
GCGGCCACGCTGGCGGGCGCCATGATTGTGTACTACCTGGTGTACGTCACGACCATTGTG
GACCAGGTGTGTGCCTACCTGGGGATAAAGTGCCTCACCATCACGCCCAAGCGCGCGTGA
GAGCGTGCAGGAGCGAGGGTGTGTGGGTGCTGCTCTAGGGGTTGGTGGGGTGGGGGCGTG
GGAGGCCTGTTGGTGGTGCGGTGATGGGGGGCTGGGGTGGACGTGTGCGAGGATGCGGTA
TGCCCGGGCGTGTTATCGAAAACAAGGTGTGTTGTCGAATGCGGGCGTGCAAGATCTTTC
GGATGAGAGCTCGTTTTATCTTCCAGGTGGGGCACTAGAGGTGACTAGCAGGACGTGCGA
ATCAAAGCGAGAGCGCTGAAATGGCATGTGGCTCTCGTCTACCGTAGCAACAGTGATGGT
GGCCCCATGAAGGTGGCTATACATAAAGGGTATGCGCAGGCCGTCAGCCCCTGTCGCGCA
GAGAAACGAGTGCAGAAATGGAAGATCTCTAAGAGCACGTAGAGGCTCGGACCTTGTGGA
CTAAGGGAATACTGGTTGTGTTGCCATGGACCATGTGCCAGAACGCAGTAAAGGGCAAAC
GGTAGACGGCTCAAGTGGTGGGTTCATGTGCGAACCTGTGATAACGTGGCGATGGTTGTG
TTGGGTTGTGACATATTGAAGGCGCCGTGCCGCGGAACTTTGACGGGGAAGGTGCTACGA
CACGGTTTGGGCATCGGCCAACTTCTCATCATTGAGGTCCAAGCCCCACTGCCGTGTTgg
cttgccccttcccccgaagggggaggggcaatagccattgcggtcgcatcgagctcgccg
cggggggccctcccggttattccagttttgacttgagttataaccttgaaacccgagcgc
agcgaaatttgtcgtgcaaataatgcgcctttctatgtatgtattgcaaagcgtaacatt
atgaaaacgcaagccctatgccttagcggggtaaacgcacaagcgcagcgtttgcattag
agctccagcgcaacatacaatatatcacaaattgtatcgataatcaaggctcacggcacg
gaaggacgcaagacggaggaatcggcgcgttggaggatcccggaaattgcgcgcgaaagc
gcgaggcgcaaaaggttggcgctatctgttttagtttcc