Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g527300.t1.2
CDS Infomation

pacid=30793001 polypeptide=Cre12.g527300.t1.2 locus=Cre12.g527300 ID=Cre12.g527300.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCTCTTGCAGCTCAGGACATGTCGGCCATGGCCAAGATGGACGAGGTAATGGCCGTG
CCGAGCAACCGGCTAAAGACAGACGGCACTGTGGACGGGCGGGACGCACCCTGGGTGGAG
AAGTACCGACCAAAGAAGCTCGACGACGTGGCCGCGCACAAGGAGATTATCGACACGATC
AAGCGTCTGACGGTGGAGAACCGGCTGCCGCATCTGCTGCTGTACGGGCCGCCCGGCACC
GGCAAGACCTCCACCATCCTGGCGGTAGCCCGCCAGATCTACGGCAACAGCCTGGCCAAC
ATGACGCTGGAGCTCAACTCCTCGGACGAGCGCGGCATCGGCGTGGTACGCCAGGAGATC
CAGGACTTTGCGTCCACGCGCAGCGTGTTCAGCAACAAGTTCAAGCTAATTATCCTGGAC
GAGTGTGACGCCATGACGCAGGACGCACAGGCGGCGCTGCGGCGAGTGATTGAGAAGTAC
ACCCGTAACGCACGCTTCTGCCTCATCTGCAACTACGTGTCAAAGATCATCCCCGCGCTG
CAGTCCCGCTGCACCAAGTTCAGGTTCGCGCCTCTGAGCCCGCAATTCGTGCGCGAGCGG
TTGCAGTACGTGGCAGACATCGAGAAGATGAAGCTGGGCCCGGGCGGCCTGGATGCGGTG
GTGCAGCTGGGCAGTGGCGACATGCGCCGCTCGCTCAACATCCTGCAGTCCTGCCACATG
GCGTTTGACACGGTGGACCAGTCGGCGGTGTACACGTGCACCGGCAACCCCCTGCCCGCC
GACATCGAGCGGGTGCTCACGTGGCTGCTCAACGACCGCGTGGCGGAGGTGTTTGCCAAC
ATCCTGAAGCTGCAGGTGGACAAGGGCATTGCACTGGTGGACATTGTGCGCGAGCTGCAC
CCGTTTGTGATGGCTCTAAGCATCCCGGTGCCTGCCAAGGTGGCGCTGGTGGAGCGGCTG
GCGGACGTGGAGCACCGCCTGGCCTTCAGCACCAGCGAGAAGCTGCAGCTGGGGGCGCTG
GTGGCGGCCTTCGTGCGGGCGAGGGAGACCATCGCGGCGGCAGCCAAGTGA

Peptide Sequence

PEP ID

Cre12.g527300.t1.2
PEP Infomation

pacid=30793001 transcript=Cre12.g527300.t1.2 locus=Cre12.g527300 ID=Cre12.g527300.t1.2.v5.5 annot-version=v5.6
Sequence

MALAAQDMSAMAKMDEVMAVPSNRLKTDGTVDGRDAPWVEKYRPKKLDDVAAHKEIIDTI
KRLTVENRLPHLLLYGPPGTGKTSTILAVARQIYGNSLANMTLELNSSDERGIGVVRQEI
QDFASTRSVFSNKFKLIILDECDAMTQDAQAALRRVIEKYTRNARFCLICNYVSKIIPAL
QSRCTKFRFAPLSPQFVRERLQYVADIEKMKLGPGGLDAVVQLGSGDMRRSLNILQSCHM
AFDTVDQSAVYTCTGNPLPADIERVLTWLLNDRVAEVFANILKLQVDKGIALVDIVRELH
PFVMALSIPVPAKVALVERLADVEHRLAFSTSEKLQLGALVAAFVRARETIAAAAK*

Transcript Sequence

Transcript ID

Cre12.g527300.t1.2
Transcript Infomation

pacid=30793001 locus=Cre12.g527300 annot-version=v5.6
Sequence

AGAGTTCTACTGTATAGCCCCTCTACCACGCTGTAGTCGCGAAACACCGAGCTGAGCACC
CGAAAACTCCGCAACGCTAAGGAATTTGCATTGGTGGTCTGAAATGTCTTCATCATTCAT
TCTTTTGTAGATCTGGCCAATTAATTTCCTCTAAAGCAGAGGGCCTGAGCGCCGGGCCGA
TTTTGCCGCGCAAATTCTAGTCACCCCGACCCTCTATCCTAGCATAGCAGGATGGCTCTT
GCAGCTCAGGACATGTCGGCCATGGCCAAGATGGACGAGGTAATGGCCGTGCCGAGCAAC
CGGCTAAAGACAGACGGCACTGTGGACGGGCGGGACGCACCCTGGGTGGAGAAGTACCGA
CCAAAGAAGCTCGACGACGTGGCCGCGCACAAGGAGATTATCGACACGATCAAGCGTCTG
ACGGTGGAGAACCGGCTGCCGCATCTGCTGCTGTACGGGCCGCCCGGCACCGGCAAGACC
TCCACCATCCTGGCGGTAGCCCGCCAGATCTACGGCAACAGCCTGGCCAACATGACGCTG
GAGCTCAACTCCTCGGACGAGCGCGGCATCGGCGTGGTACGCCAGGAGATCCAGGACTTT
GCGTCCACGCGCAGCGTGTTCAGCAACAAGTTCAAGCTAATTATCCTGGACGAGTGTGAC
GCCATGACGCAGGACGCACAggcggcgctgcggcgagTGATTGAGAAGTACACCCGTAAC
GCACGCTTCTGCCTCATCTGCAACTACGTGTCAAAGATCATCCCCGCGCTGCAGTCCCGC
TGCACCAAGTTCAGGTTCGCGCCTCTGAGCCCGCAATTCGTGCGCGAGCGGTTGCAGTAC
GTGGCAGACATCGAGAAGATGAAGCTGGGCCCGGGCGGCCTGGATGCGGTGGTGCAGCTG
GGCAGTGGCGACATGCGCCGCTCGCTCAACATCCTGCAGTCCTGCCACATGGCGTTTGAC
ACGGTGGACCAGTCGGCGGTGTACACGTGCACCGGCAACCCCCTGCCCGCCGACATCGAG
CGGGTGCTCACGTGGCTGCTCAACGACCGCGTGGCGGAGGTGTTTGCCAACATCCTGAAG
CTGCAGGTGGACAAGGGCATTGCACTGGTGGACATTGTGCGCGAGCTGCACCCGTTTGTG
ATGGCTCTAAGCATCCCGGTGCCTGCCAAGGTGGCGCTGGTGGAGCGGCTGGCGGACGTG
GAGCACCGCCTGGCCTTCAGCACCAGCGAGAAGCTGCAGCTGGGGGCGCTGGTGGCGGCC
TTCGTGCGGGCGAGGGAGACCATCGCGGCGGCAGCCAAGTGATGATGGggaggaggaggg
gaaggaggaggaggaggaggcgtgaggaggagggggggggggGTGTTGCGCATTGCATGA
GGGCGGAAGGGAACGGAGGTGCAGGGCTTGAGCTGCAGGGGGCTGGGTGTGGCCGTGTGG
GGGTTGAATTTAGCACGCTGGCTATGTGTGAGTGCTGGACTCATGCATTTGGGCATTCGA
TGCAATGGTTGATCTATGGTTGCACAGTGTCGCGTATGACAGCGGGGGCTTGGCAGTCGA
CGTGGGAACGGGGCGCGGTAGCGGTGCGGGCGCCGGTTGCGGTTGTGCCCAGGGTTGTGC
CAGAGGCCTCACGCGGGCCCTCACGGCGGGCCCTGTTATAAGGCAGGATGTGTGGCGGCT
CGCAGTGAGCAGTGCAGTGTGCGTAAATGGTGCCCAGGCGACTGCAAGGGCGCGAGGGGA
AGGATGCGCGTGCACCGGGGCCTCGCCGACCAGTCCGTTAGCGGGCAACGGCGAAAGGCT
GTTCGTGCAACCGCCTTGCAACgcgcgcgaacgacgcaccaatgccttgtcccttcttgc
tacgcatttatgtgggcacgggtgggagccacacacatcgggactacgctttcctgcccc
ttgccatgttccatcacgagcAACCGCCTTGCAACCTGCTTCTAGCGTTGTGTCGCCGAC
TTTGTGCTGAGGGCTGCACTGCATAAGGACAGGCAACGCCAGCGCCCGCAAACCCTACGG
CGCGCCCGAACTGCGGATTCCGCGGAATCGGTGGCGATTCGGCCAAATGAACAGTTGGGC
GCGCAACACCCATAGAAA