Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g513200.t1.2
CDS Infomation

pacid=30792008 polypeptide=Cre12.g513200.t1.2 locus=Cre12.g513200 ID=Cre12.g513200.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCCGTCCAGGAGTACATTGAGAAGCATGGTCTGGAGAAGAAGGTGGAGGAGGTGCTG
AACCTGTGCGTCAAGGAGAAGCCTGAGGAGCCCCTGTCTTTCATGGCCAAGGCCCTGGGC
CAGCTGACGCCGCCGGAGATCGTCAAGGTGGTCGGACGCCAAATTATCGACTCGCGCGGC
AACCCCACTGTTGAGGCCGATGTGTACACCCGCAAGGGCATGTTCCGTGCTGCCGTGCCC
TCCGGTGCCTCGACCGGTGTGCACGAGGCTGTGGAGCTGCGCGACGGCGACAAGTCCAAG
TACCTGGGCAAGGGTGTGACCAAGGCTGTTGAGAACATCAACGCTATTATTGCCCCCGCC
CTGAAGGGCATGGACCCCGTCAAGCAGGCGGAGATTGACCAGAAGATGAAGGACCTGGAC
GGCACTGACAACAAGGGCAAGCTGGGTGCCAACGCCATCCTGGCCGTCTCCATGGCCGTG
TGCAAGGCCGGTGCCGCTGAGAAGGGCGTGCCCCTGTACAAGCACATTGCGGACCTGGCC
GGCAACAGCAAGCTGATCCTGCCCGTGCCCTCGTTCAACATCATCAACGGCGGCAGCCAC
GCCGGCAACGCCCTGGCTATGCAGGAGTTCATGATCCTGCCCGTTGGCGCCTCGAGCTTC
TCTGAGGCCATGCGCATGGGCTGCGAGGTGTACCACGCCCTGAAGGGCCTGATCAAGGCC
AAGTACGGCCAGGACGCCTGCAACGTGGGTGATGAGGGTGGCTTCGCCCCCAACATCGGC
TCCAACGATGAGGGCCTGAACTTGGTGAACGAGGCCATCGAGAAGGCCGGCTACACCGGC
AAGGTGAAGATCGGCATGGACGTGGCCTCGTCGGAGTTCTACACCGAGGACGGCATGTAC
GACCTGGACTTCAAGAACCAGCCCAACGATGGCTCGCAGAAGAAGACCAAGGAGCAGATG
CTGGAGCTGTACAACGAGTTCTGCAAGAAGTACCCGGTCATCTCCATCGAGGACCCCTTC
GAGCAGGACGACTGGGAGCCCTGCGCCAAGCTGACCACCGAGAACATCTGCCAGGTGGTC
GGCGACGACATCCTGGTGACCAACCCCGTGCGCGTGAAGAAGGCCATCGACGCCAAGGCC
GTCAACGCTCTGCTGCTCAAGGTCAACCAGATCGGTACCATTACCGAGTCCATTGAGGCC
GTGCGCATGGCCAAGGAGGCCGGCTGGGGTGTCATGACCAGCCACCGCTCGGGTGAGACT
GAGGACTCTTTCATCGCCGACCTGGCGGTGGGCCTGGCCTCCGGCCAGATCAAGACCGGC
GCCCCCTGCCGCTCGGAGCGCAATGCCAAGTACAACCAGCTGCTGCGCATCGAGGAGGAG
CTGGGCGAGAACGCTGTGTACGCTGGCGAGAGCTGGCGCCACATCGGCTGGTAA

Peptide Sequence

PEP ID

Cre12.g513200.t1.2
PEP Infomation

pacid=30792008 transcript=Cre12.g513200.t1.2 locus=Cre12.g513200 ID=Cre12.g513200.t1.2.v5.5 annot-version=v5.6
Sequence

MSVQEYIEKHGLEKKVEEVLNLCVKEKPEEPLSFMAKALGQLTPPEIVKVVGRQIIDSRG
NPTVEADVYTRKGMFRAAVPSGASTGVHEAVELRDGDKSKYLGKGVTKAVENINAIIAPA
LKGMDPVKQAEIDQKMKDLDGTDNKGKLGANAILAVSMAVCKAGAAEKGVPLYKHIADLA
GNSKLILPVPSFNIINGGSHAGNALAMQEFMILPVGASSFSEAMRMGCEVYHALKGLIKA
KYGQDACNVGDEGGFAPNIGSNDEGLNLVNEAIEKAGYTGKVKIGMDVASSEFYTEDGMY
DLDFKNQPNDGSQKKTKEQMLELYNEFCKKYPVISIEDPFEQDDWEPCAKLTTENICQVV
GDDILVTNPVRVKKAIDAKAVNALLLKVNQIGTITESIEAVRMAKEAGWGVMTSHRSGET
EDSFIADLAVGLASGQIKTGAPCRSERNAKYNQLLRIEEELGENAVYAGESWRHIGW*

Transcript Sequence

Transcript ID

Cre12.g513200.t1.2
Transcript Infomation

pacid=30792008 locus=Cre12.g513200 annot-version=v5.6
Sequence

ATGAAGCTAGCGGGGCTTGACCGTGGACTGGCTGCGCAGACATGTCTCAAACTGTGTAGT
TCGTGAGGGGGACCAAGGGTTTGCAGTAATGCTTAGGATGGCGAACAAAGATATCGGGGC
AAACGTCTGGCAAATAAAAAGCAAAGTGAGTGTTGACTAGGGCCCCATCGCGGCGCTTCT
CTCTTCGTGATGGCCCCATTGTGCAAACCACAAAGGCCTTCCAAATGCAGTCGGCGCATC
CCCGTACTTACTCTTCACTAGGCAGAGCACCCAACTGGTGTCCTCTTCGTGCCCGCAACA
CTTACACCTCGCATCGAGTGTTTTCTGCACCTCGCGCAAAGATGTCCGTCCAGGAGTACA
TTGAGAAGCATGGTCTGGAGAAGAAGGTGGAGGAGGTGCTGAACCTGTGCGTCAAGGAGA
AGCCTGAGGAGCCCCTGTCTTTCATGGCCAAGGCCCTGGGCCAGCTGACGCCGCCGGAGA
TCGTCAAGGTGGTCGGACGCCAAATTATCGACTCGCGCGGCAACCCCACTGTTGAGGCCG
ATGTGTACACCCGCAAGGGCATGTTCCGTGCTGCCGTGCCCTCCGGTGCCTCGACCGGTG
TGCACGAGGCTGTGGAGCTGCGCGACGGCGACAAGTCCAAGTACCTGGGCAAGGGTGTGA
CCAAGGCTGTTGAGAACATCAACGCTATTATTGCCCCCGCCCTGAAGGGCATGGACCCCG
TCAAGCAGGCGGAGATTGACCAGAAGATGAAGGACCTGGACGGCACTGACAACAAGGGCA
AGCTGGGTGCCAACGCCATCCTGGCCGTCTCCATGGCCGTGTGCAAGGCCGGTGCCGCTG
AGAAGGGCGTGCCCCTGTACAAGCACATTGCGGACCTGGCCGGCAACAGCAAGCTGATCC
TGCCCGTGCCCTCGTTCAACATCATCAACGGCGGCAGCCACGCCGGCAACGCCCTGGCTA
TGCAGGAGTTCATGATCCTGCCCGTTGGCGCCTCGAGCTTCTCTGAGGCCATGCGCATGG
GCTGCGAGGTGTACCACGCCCTGAAGGGCCTGATCAAGGCCAAGTACGGCCAGGACGCCT
GCAACGTGGGTGATGAGGGTGGCTTCGCCCCCAACATCGGCTCCAACGATGAGGGCCTGA
ACTTGGTGAACGAGGCCATCGAGAAGGCCGGCTACACCGGCAAGGTGAAGATCGGCATGG
ACGTGGCCTCGTCGGAGTTCTACACCGAGGACGGCATGTACGACCTGGACTTCAAGAACC
AGCCCAACGATGGCTCGCAGAAGAAGACCAAGGAGCAGATGCTGGAGCTGTACAACGAGT
TCTGCAAGAAGTACCCGGTCATCTCCATCGAGGACCCCTTCGAGCAGGACGACTGGGAGC
CCTGCGCCAAGCTGACCACCGAGAACATCTGCCAGGTGGTCGGCGACGACATCCTGGTGA
CCAACCCCGTGCGCGTGAAGAAGGCCATCGACGCCAAGGCCGTCAACGCTCTGCTGCTCA
AGGTCAACCAGATCGGTACCATTACCGAGTCCATTGAGGCCGTGCGCATGGCCAAGGAGG
CCGGCTGGGGTGTCATGACCAGCCACCGCTCGGGTGAGACTGAGGACTCTTTCATCGCCG
ACCTGGCGGTGGGCCTGGCCTCCGGCCAGATCAAGACCGGCGCCCCCTGCCGCTCGGAGC
GCAATGCCAAGTACAACCAGCTGCTGCGCATCGAGGAGGAGCTGGGCGAGAACGCTGTGT
ACGCTGGCGAGAGCTGGCGCCACATCGGCTGGTAAACAGCCGACAGCTTGGCTGGGGCCT
GACTTGCGGAAGCAGCTGGAGTCGGCGGCGTGACGCGTGGTGGTCTAGCTTGGAGGGTGG
TGGTCGGGATGCAAGCTCGGATTGTTTGCGGGAACTTGGTGGAGATGGGATGCCTAGCGG
CATCGTAGGGTTGGAGCAGTGGTGCAGGAGGCGTTGCGGGGATCGGGTCGTCCTTGGTAG
AGCAGAAGGGGCAGATGTTTGCACAGCGGCTGCGGCTCAGCTGACCGTTGTGAATTTGTA
GTGCCGACATGCACACTGAAGAAAGAATGAGTTGCACGTGCGGTGCAGCAGACGGGAACC
TGCATAAGGACTTCTGCGGCGTTCAGGGCGGACTGTGTAAGGTCTTTTGTTC