Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g509650.t1.2
CDS Infomation

pacid=30793403 polypeptide=Cre12.g509650.t1.2 locus=Cre12.g509650 ID=Cre12.g509650.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCAGACCCAGGTCAAGCCCTCTAGCTCGCGCCAGGCTAACCTGGTGGCGAAGGGCGCG
TCGTGCCCTCGCGTAGCCGTCCGTCGCGTTGCTGGCCGTCGCGCTCTGGAGGTTGTTGCA
CGGGACTACCCGAGGCCTGCCTTTGAGACTGCGGAGACATTCCAGGAGGCGAAGGCGCTG
TCCAGCAAGCTTAAGGATGCTCCCCGCCCGGCGAAGCCCCTTAAGGTTGTAATTGCCGGC
GCTGGCCTGGCTGGTTTGTCTGCGGCGAAGTACCTTTCGGACGCTGGACACCACCCAATC
GTTCTGGAGGGCCGCGACGTGCTCGGTGGCAAGGTCGCTGCATGGAAGGATGAGGATGGC
GACTGGTACGAGACTGGCTTGCACATCTTCTTCGGCGCGTACCCCAACATGATGAATGTC
TTCAAGGAGCTAAACATCGAGGAGCGCCTGCAGTGGAAGGAGCACTCCATGATCTTTGCT
ATGCCCGACTCCCCCGGCGAGTTCTCCCGCTTCGATTTCCCCGACATCCCCGCCCCCTTC
AACGGCGTCTTCGCCATTCTGCGCAACAACCAGATGCTCACTTGGCCGGAGAAGATTCAG
TTCGCTATCGGCCTGCTGCCGGCCATCATCTTCGGCCAGAAGTACGTGGAGGAGCAGGAC
CACCTGAGCGTCACACAGTGGATGCGCCAGCAGGGCGTGCCCGACCGCGTGAACGAGGAG
GTCTTCATTGCCATGGCCAAGGCCCTGGCCTTCATCGACCCCGACCGCCTGTCCATGACC
GTGGTCCTGACCGCGCTCAACCGCTTCCTGCAGGAGCGCCACGGCTCCAAGATGGCCTTC
CTGGATGGCGCGCCCCCGGAGCGCCTGTGCCAGCCCATGGTGGACCACTTCACGGCCCGC
GGCGGCGAGCTGAAGATGAACGCGCGCGTGAAGGACATTGTGCTGAACGACGACGGCAGC
GTCAAGCACTACAAGCTGACCACCGGGGAGGTGGTGGAGGGCGACCTGTACATGAGCGCC
ATGCCGGTGGACATCCTGAAGCTGCTGGTGCCGGACCAGTGGAAGCCCAACCCCTACTTC
TCCCAGCTGAAGGAGCTGGAGGGCGTGCCCGTCATCAACATCCACATCTGGTTTGACCGC
AAGCTGACCACCGTGGACCACCTGCTGTTCAGCCGCTCGCCGCTGCTGTCGGTGTACGCG
GACATGAGCACCACCTGCAAGGAGTACTACGACACGGAGAAGTCCATGCTGGAGCTCGTG
TTCGCGCCCGCCAAGGACTGGATCGGCCGCTCGGATGAGGACATCATCGCCGCCACCATG
ACTGAGCTGGAGCGCCTGTTTCCCACCGAGATCAAGGCCGACCAGTCGCTGGCCAAGATC
CGCAAGTACAAGGTCATCAAGACGCCGCTGTCCGTGTACGAGAGCCGCGCCGGCCGCGAG
GCCTTCCGCCCCAGCCAGCGCACGCCCATCAAGAACTTCTTCCTGGCGGGCGACTTCACC
AAGCAGAAGTACCTGGCTTCCATGGAGGGCGCCATCTTTTCCGGCAAGCTGGCCGCCGAG
CAGATCGTCAACGACTACAACTACAAGGGCGTGGCACCGCCCGCGCGCTCGTCCAGCTCG
CCCGAGCTGGTGGCGGCCTCTGCGCTGCTGGCGGTGGCGGCCGTGGGCGCCGGCCTGGTC
GGCTTTGGCCGGTAA

Peptide Sequence

PEP ID

Cre12.g509650.t1.2
PEP Infomation

pacid=30793403 transcript=Cre12.g509650.t1.2 locus=Cre12.g509650 ID=Cre12.g509650.t1.2.v5.5 annot-version=v5.6
Sequence

MQTQVKPSSSRQANLVAKGASCPRVAVRRVAGRRALEVVARDYPRPAFETAETFQEAKAL
SSKLKDAPRPAKPLKVVIAGAGLAGLSAAKYLSDAGHHPIVLEGRDVLGGKVAAWKDEDG
DWYETGLHIFFGAYPNMMNVFKELNIEERLQWKEHSMIFAMPDSPGEFSRFDFPDIPAPF
NGVFAILRNNQMLTWPEKIQFAIGLLPAIIFGQKYVEEQDHLSVTQWMRQQGVPDRVNEE
VFIAMAKALAFIDPDRLSMTVVLTALNRFLQERHGSKMAFLDGAPPERLCQPMVDHFTAR
GGELKMNARVKDIVLNDDGSVKHYKLTTGEVVEGDLYMSAMPVDILKLLVPDQWKPNPYF
SQLKELEGVPVINIHIWFDRKLTTVDHLLFSRSPLLSVYADMSTTCKEYYDTEKSMLELV
FAPAKDWIGRSDEDIIAATMTELERLFPTEIKADQSLAKIRKYKVIKTPLSVYESRAGRE
AFRPSQRTPIKNFFLAGDFTKQKYLASMEGAIFSGKLAAEQIVNDYNYKGVAPPARSSSS
PELVAASALLAVAAVGAGLVGFGR*

Transcript Sequence

Transcript ID

Cre12.g509650.t1.2
Transcript Infomation

pacid=30793403 locus=Cre12.g509650 annot-version=v5.6
Sequence

ATGACCTGCGCTGCCGCAAATACACATACATTTAGAGGGTGGGTCATTTAGCACCTCTGA
TCTAGAGTAGTGCTATCTTTCAATCACTGCAGAATGCAGACCCAGGTCAAGCCCTCTAGC
TCGCGCCAGGCTAACCTGGTGGCGAAGGGCGCGTCGTGCCCTCGCGTAGCCGTCCGTCGC
GTTGCTGGCCGTCGCGCTCTGGAGGTTGTTGCACGGGACTACCCGAGGCCTGCCTTTGAG
ACTGCGGAGACATTCCAGGAGGCGAAGGCGCTGTCCAGCAAGCTTAAGGATGCTCCCCGC
CCGGCGAAGCCCCTTAAGGTTGTAATTGCCGGCGCTGGCCTGGCTGGTTTGTCTGCGGCG
AAGTACCTTTCGGACGCTGGACACCACCCAATCGTTCTGGAGGGCCGCGACGTGCTCGGT
GGCAAGGTCGCTGCATGGAAGGATGAGGATGGCGACTGGTACGAGACTGGCTTGCACATC
TTCTTCGGCGCGTACCCCAACATGATGAATGTCTTCAAGGAGCTAAACATCGAGGAGCGC
CTGCAGTGGAAGGAGCACTCCATGATCTTTGCTATGCCCGACTCCCCCGGCGAGTTCTCC
CGCTTCGATTTCCCCGACATCCCCGCCCCCTTCAACGGCGTCTTCGCCATTCTGCGCAAC
AACCAGATGCTCACTTGGCCGGAGAAGATTCAGTTCGCTATCGGCCTGCTGCCGGCCATC
ATCTTCGGCCAGAAGTACGTGGAGGAGCAGGACCACCTGAGCGTCACACAGTGGATGCGC
CAGCAGGGCGTGCCCGACCGCGTGAACGAGGAGGTCTTCATTGCCATGGCCAAGGCCCTG
GCCTTCATCGACCCCGACCGCCTGTCCATGACCGTGGTCCTGACCGCGCTCAACCGCTTC
CTGCAGGAGCGCCACGGCTCCAAGATGGCCTTCCTGGATGGCGCGCCCCCGGAGCGCCTG
TGCCAGCCCATGGTGGACCACTTCACGGCCCGCGGCGGCGAGCTGAAGATGAACGCGCGC
GTGAAGGACATTGTGCTGAACGACGACGGCAGCGTCAAGCACTACAAGCTGACCACCGGG
GAGGTGGTGGAGGGCGACCTGTACATGAGCGCCATGCCGGTGGACATCCTGAAGCTGCTG
GTGCCGGACCAGTGGAAGCCCAACCCCTACTTCTCCCAGCTGAAGGAGCTGGAGGGCGTG
CCCGTCATCAACATCCACATCTGGTTTGACCGCAAGCTGACCACCGTGGACCACCTGCTG
TTCAGCCGCTCGCCGCTGCTGTCGGTGTACGCGGACATGAGCACCACCTGCAAGGAGTAC
TACGACACGGAGAAGTCCATGCTGGAGCTCGTGTTCGCGCCCGCCAAGGACTGGATCGGC
CGCTCGGATGAGGACATCATCGCCGCCACCATGACTGAGCTGGAGCGCCTGTTTCCCACC
GAGATCAAGGCCGACCAGTCGCTGGCCAAGATCCGCAAGTACAAGGTCATCAAGACGCCG
CTGTCCGTGTACGAGAGCCGCGCCGGCCGCGAGGCCTTCCGCCCCAGCCAGCGCACGCCC
ATCAAGAACTTCTTCCTGGCGGGCGACTTCACCAAGCAGAAGTACCTGGCTTCCATGGAG
GGCGCCATCTTTTCCGGCAAGCTGGCCGCCGAGCAGATCGTCAACGACTACAACTACAAG
GGCGTGGCACCGCCCGCGCGCTCGTCCAGCTCGCCCGAGCTGGTGGCGGCCTCTGCGCTG
CTGGCGGTGGCGGCCGTGGGCGCCGGCCTGGTCGGCTTTGGCCGGTAAACGTGTAGAGGC
ATTTGGGGATGCGGCTCGGATGGCGGTGTGGATGGGCTACATCCGGAGGATTCAGGAGAC
TTGATGACGCTCGTGACTGTTGTCTTTAGGACTGACTGAACAGGTTGTGCGTGACGTCGT
GAGCGTATGTGTGATTGCGCGGTGCAAATGGTGGCGACAAATGTTTTGAGTGTGCGGACT
TCTGGAGTGAGCGTGATGCGTGGAGTGCCTGTGTGAGCATACGAGTGCTAAACGTGTTTG
GTAATATCCAACGCAGCTGTAGGGCGCATGTGAGACGATCAAGGATGCAAGCACGGACCT
GGTATTGGGTGGAGCAGGCGTCACGACCTGGTGTTAGGGCGGGCGTGCCTGCCCGATTTT
GCACCTACACTGGTTTGGCACTCGTAGAACAGGGTCTAGAAGATAGATGGCGTGCCTGGC
ACACATGCCATAGCGCACATGCCATAGTTGATCTTAGGTCTGAGGGGTGAAGCGGGTAGG
CAGGCAGGAGACAGGCCGCCGGAAGTGGCGCAGGCGCGTCAGGGAACGCTTGAAGCGTAG
GCCTTGTTATTTGGGCAGTCGAGGATTTGGTTGCCCTCGTACAGACCGTGGGCGAAGTAG
CCATGCTGTGCATGGTTTGTGTAACAGAAAGGTGAC