Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g509400.t1.2
CDS Infomation

pacid=30791837 polypeptide=Cre12.g509400.t1.2 locus=Cre12.g509400 ID=Cre12.g509400.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCTCATTGCGCGTCTGAGGCTGCCTCGACCAGTTCTGACAGCGACGGCGCGCATTCC
TCGCCACCAGCTTCGCCGCCGAGCAGGCACTCGCCACAAACACCAGAGAAGACGGAAGCA
GCATTTATTAGAGTGCCTTGTGGTGGTGACGCGTCGCCTGGCGCGGAGCAGGCCTCGACA
CCAAACCTTGCAGCGTCGCCGGGCGAGGTCTTTCTAAATGCCGGCGGCCACCGGGCAACA
AGTAGTGCGTCCCTAGGACATGCACATGCGGCAGCCACAGCGGCGCTTGGCTCGCTGACG
CTTGGCGCGGTGCAGCGTGGGCAAGAGGCGGACCAGGAGCGCGAGCAGCCACTCGCAACC
ACAAGCGGGTCAACGGGTCTTGTCGAGGAGCCATGCATGCCTGATGGGACGTGCTGCCGG
ACGTCGGCCTGCGAGGCAGGGCCAGCGGAAGTCGCTGAGCCTTCGGCGGAGGTGGCCTCC
AGGAGCACGCTGCTGGACGAGGACTTGCTACGAGAGAATCCTAACAGGTTCACCCTGTTC
CCCATCAAGTACCCGGACCTGTGGGAGTTCTACAAGCAGGGCGTGGCCTCGTTTTGGACT
GTGGAGGAGGTGGACTTCACAGGCGACCTCATCGACTGGCACCGCCTCAAGCCCGAGGAG
CAGCGCTTCATCAAGTACGTGCTGGCATTCTTCGCCGCCAGCGACGGCATTGTGATGGAG
AACCTGGCGGCGCGCTTCATGAGCGACATCCAGGTGCCGGAGGCGCGCGCCTTCTACGGC
TTCCAGATCGCCATGGAGAACGTGCACAGCGAGATGTACTCGGTGCTGCTGGACCACTAC
GTGCGCGAGCCCGAGGAGCGCAACCAGCTGTTCGACGCCATCCACACCATCCCCACCGTG
GCTAAGAAGGCGGAGTGGGCCATGCGCTGGATCAGCTCCTCCAACGTGTTCGCGGAGCGC
CTGGTGGGCTTCGCCTGCGTGGAGGGCATCCACTTCTCCGGCTCCTTCTGCTCCATCTTC
TGGTTGAAGAAGCGCTGCCTGATGCCGGGGCTGTCCTTCTCCAACGTGCTCATCAGCCGG
GACGAGGGCCTGCACTGCGACTTCGCGTGCTGCCTGTACTCGCACCTCAAGAACCGTCTG
TCGCGCGAGCGCGTGCTGCAGATCGTTGACGAGGCTGTGCAGCTGGAGGACGAGTTCTGC
ACCGAGGCGCTGTCGTGCGAGCTGCTGGGCATGAACGCGGACCTCATGCGCCAGTACATC
AGGTTCGTGGCGGACCGGCTGCTGGTGTCGCTGGGCTATGAGAAGCACTACAACACGCGC
AACCCGTTCGACTGGATGGAGATGATCAGCCTGCAGGGCAAGGCCAACTTCTTCGAGCGG
CGCGTCGGCGAGTACCAGCGCGCGGGCGTCATGGGCGGCAACAACGGCAACTCGGCCCGC
GACCCCAGCGAGTACGTGTTCACCACGGAGGCGGACTTCTAG

Peptide Sequence

PEP ID

Cre12.g509400.t1.2
PEP Infomation

pacid=30791837 transcript=Cre12.g509400.t1.2 locus=Cre12.g509400 ID=Cre12.g509400.t1.2.v5.5 annot-version=v5.6
Sequence

MSHCASEAASTSSDSDGAHSSPPASPPSRHSPQTPEKTEAAFIRVPCGGDASPGAEQAST
PNLAASPGEVFLNAGGHRATSSASLGHAHAAATAALGSLTLGAVQRGQEADQEREQPLAT
TSGSTGLVEEPCMPDGTCCRTSACEAGPAEVAEPSAEVASRSTLLDEDLLRENPNRFTLF
PIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIKYVLAFFAASDGIVME
NLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPEERNQLFDAIHTIPTV
AKKAEWAMRWISSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKRCLMPGLSFSNVLISR
DEGLHCDFACCLYSHLKNRLSRERVLQIVDEAVQLEDEFCTEALSCELLGMNADLMRQYI
RFVADRLLVSLGYEKHYNTRNPFDWMEMISLQGKANFFERRVGEYQRAGVMGGNNGNSAR
DPSEYVFTTEADF*

Transcript Sequence

Transcript ID

Cre12.g509400.t1.2
Transcript Infomation

pacid=30791837 locus=Cre12.g509400 annot-version=v5.6
Sequence

GAGCTGCAAGGGGGACATTGAATTGCGACGCCGGTGTGCCACAAACCACAGCACAACATA
GCACATAAGGCCCCAATATGACGGTGGACGGTCCAGTAGCCCCTACCAGCCTTTTACGCA
CCAATTTCCTCGAACCAATGTCTCATTGCGCGTCTGAGGCTGCCTCGACCAGTTCTGACA
GCGACGGCGCGCATTCCTCGCCACCAGCTTCGCCGCCGAGCAGGCACTCGCCACAAACAC
CAGAGAAGACGGAAGCAGCATTTATTAGAGTGCCTTGTGGTGGTGACGCGTCGCCTGGCG
CGGAGCAGGCCTCGACACCAAACCTTGCAGCGTCGCCGGGCGAGGTCTTTCTAAATGCCG
GCGGCCACCGGGCAACAAGTAGTGCGTCCCTAGGACATGCACATGCGGCAGCCACAGCGG
CGCTTGGCTCGCTGACGCTTGGCGCGGTGCAGCGTGGGCAAGAGGCGGACCAGGAGCGCG
AGCAGCCACTCGCAACCACAAGCGGGTCAACGGGTCTTGTCGAGGAGCCATGCATGCCTG
ATGGGACGTGCTGCCGGACGTCGGCCTGCGAGGCAGGGCCAGCGGAAGTCGCTGAGCCTT
CGGCGGAGGTGGCCTCCAGGAGCACGCTGCTGGACGAGGACTTGCTACGAGAGAATCCTA
ACAGGTTCACCCTGTTCCCCATCAAGTACCCGGACCTGTGGGAGTTCTACAAGCAGGGCG
TGGCCTCGTTTTGGACTGTGGAGGAGGTGGACTTCACAGGCGACCTCATCGACTGGCACC
GCCTCAAGCCCGAGGAGCAGCGCTTCATCAAGTACGTGCTGGCATTCTTCGCCGCCAGCG
ACGGCATTGTGATGGAGAACCTGGCGGCGCGCTTCATGAGCGACATCCAGGTGCCGGAGG
CGCGCGCCTTCTACGGCTTCCAGATCGCCATGGAGAACGTGCACAGCGAGATGTACTCGG
TGCTGCTGGACCACTACGTGCGCGAGCCCGAGGAGCGCAACCAGCTGTTCGACGCCATCC
ACACCATCCCCACCGTGGCTAAGAAGGCGGAGTGGGCCATGCGCTGGATCAGCTCCTCCA
ACGTGTTCGCGGAGCGCCTGGTGGGCTTCGCCTGCGTGGAGGGCATCCACTTCTCCGGCT
CCTTCTGCTCCATCTTCTGGTTGAAGAAGCGCTGCCTGATGCCGGGGCTGTCCTTCTCCA
ACGTGCTCATCAGCCGGGACGAGGGCCTGCACTGCGACTTCGCGTGCTGCCTGTACTCGC
ACCTCAAGAACCGTCTGTCGCGCGAGCGCGTGCTGCAGATCGTTGACGAGGCTGTGCAGC
TGGAGGACGAGTTCTGCACCGAGGCGCTGTCGTGCGAGCTGCTGGGCATGAACGCGGACC
TCATGCGCCAGTACATCAGGTTCGTGGCGGACCGGCTGCTGGTGTCGCTGGGCTATGAGA
AGCACTACAACACGCGCAACCCGTTCGACTGGATGGAGATGATCAGCCTGCAgGGCAAGG
CCAACTTCTTCGAGCGGCGCGTCGGCGAGTACCAGCGCGCGGGCGTCATGGGCGGCAACA
ACGGCAACTCGGCCCGCGACCCCAGCGAGTACGTGTTCACCACGGAGGCGGACTTCTAGG
CGTGTGGGGCGGCAGCACGTAAGGAGCGGTGGCGGCAGTGCCGGTGGAGAGCTGGTGCTG
TGCAGAACGCGGCATGGAAAGAGGAGAGCATGGAGCGCAGCTTGGCGAGCGGCATGCCTG
GTAGCTTTACAGCTGCCTTAGCCGGGTGTAGCCGCGGAGGGCGCCACCGGGCGCGGCATG
GAGGTGCCGCCGGCGGCAGGTCACCGGGATCCGGAGATGCCGCCGGCGCATATGGAGTGT
GCGCGATCCTAGGTTATGGCGCCGCAGGAGCAGCAGGAAAGCTGGTGCTTGTCCCCGGGC
TTGAAGGCACCTGTTCAGTGCGCGAGAGACCGCCGCGCCATCCACGGCTGGCTGCAAGCT
CAGGACATAGCGCAGCCGCGGCAGGCGGAGCCGGTGGAGTCGACATTATATAAACATGAC
CAAAACATCTATCTCATTTACCTAGACCCCATTATGTCAGCGTGTGCTGTGTCTGTTGGT
GGGTGCGTTACGTTGCTACGATTTGCGCAAGTGAACAACTGACAGCAGGGATGAAGAGAA
TAGCATCGTGTGCGCGCAGGAGGATCGCATGGCTATCCAGGATGAGAACGTCGGATTTCA
ATCAACATGTCGACAGGCATGTCATTGGCAGGTGATTGCAGGTCACAACACATACAATAG
CATGTGTACGGAGGGCAAGCGGCGGCGACGGCCGGTTGTGCAGGCGTTTGCTACTTTCGT
TGCTCATGTTGAGTGACGGGCTGGCAGCAGGGTACGTGCCTGACGTGCGTTCGGAGGTTG
CAGAGTGTGGACTGACGGGTAAATGCGACCGTGGGGTGTCAAGCACTTGCCGAGTGTTTA
GGTGCGGCCTGATCTGCCATCGGCAGCCAGCAATTAACCAGCATGGGTGGGCTTGCGGGA
GGGCAATTGTGCGTGTGTGGAAGGCTGTAGCATTTCGTTGCGGCATGCGCTTCTATGTGT
GAGTTATGTTCTTTCATTTTCCGGATAGTCGGGGGCGGGACAAACTTGCGAAACATCGGA
CTGGGTACGGCATGTTGCTCGGATGGCGCTGGCTGCGGCAGGCTGCGGTGCCGCGTGGCC
GGGAACAGGAAGCCCAGCAACTCAGCAAGCCTACTTATGGAACTCAAAGTGTAAGAATGA
AGCTTT