Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g490000.t1.2
CDS Infomation

pacid=30792971 polypeptide=Cre12.g490000.t1.2 locus=Cre12.g490000 ID=Cre12.g490000.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCGCAACACCAGGATTCCCGTATGTATGAAGCGAAGTACCCGGAGGTGGACGATGTG
GTAATGGTCCAGGTCAAGTCGATAGCGGAAATGGGCGCCTACGTCTCGCTGCTGGAGTAC
AATGGCATTGAGGGCATGATCCTGCTCTCTGAGCTTTCCAGGCGCCGCATTCGCTCTATC
ACAAAGCTTATCAAGGTCGGCCGCCAAGAGCCGGTGATGGTGCTGCGTGTTGATAAAGAG
AAGGGCTACATCGATCTGTCCAAGCGCCGCGTGTCGCCTGAGGACGTGGCGAAGTGCGAG
GAGCGCTACAACAAGTCCAAGCTGGTGCACTCCATCATGCGCCACGTGGCCGAGACCACG
GGGCGAGACCTGGAGGCGCTGTACGACAACATCGCCTGGCCGCTGTACAAGCTGTACGGG
CACGCGTTCGACGCGTTCAAGACCATGGTGACGGACGAGGGCGATGCCATCTTCAAGAAG
CTCGAGGAGGAGAAGGGCGCCGCGGCCACCGCGCTGCTCTCATCCGAGGTGCGCGAGGCG
CTGCTGAAAAACATCAAGCGGCGCATGACCCCGCAGCCGCTGAAGATCCGTGCGGACGTG
GAGATGACGTGCTTCACCTACGACGGCATTGAGCACATCAAGAGCGCCATCCGCGCCGCG
GAGGCGACCAGCACGGAGGAGTGCCCCGTCAAGATGAAGCTGGTGGCGCCGCCGCTGTAC
GTGCTCACCACACAGACATTGGACAAGAACAAGGGCGTTGAGGTCCTCACGGCGGCGTGC
GAGGCGTGCCAGAAGTCCATTGAGGCCAGCCGCGGCAAGCTGGTGGTGAAGGAGGCGGCG
CGCGCGGTGTCGGAGCGTGACGACCGCCTGCTCAACGAGAAGCTGGAGCAGCTGGAGGCA
GCCAACGCCGAGGTGGACGGCGACGACGAAAGCGACGAGGAGGAGGACACGGGTATGGGC
GACATCGACGTGGAGGCCGGCCCCGCCTTCGTGGACGTATGA

Peptide Sequence

PEP ID

Cre12.g490000.t1.2
PEP Infomation

pacid=30792971 transcript=Cre12.g490000.t1.2 locus=Cre12.g490000 ID=Cre12.g490000.t1.2.v5.5 annot-version=v5.6
Sequence

MAQHQDSRMYEAKYPEVDDVVMVQVKSIAEMGAYVSLLEYNGIEGMILLSELSRRRIRSI
TKLIKVGRQEPVMVLRVDKEKGYIDLSKRRVSPEDVAKCEERYNKSKLVHSIMRHVAETT
GRDLEALYDNIAWPLYKLYGHAFDAFKTMVTDEGDAIFKKLEEEKGAAATALLSSEVREA
LLKNIKRRMTPQPLKIRADVEMTCFTYDGIEHIKSAIRAAEATSTEECPVKMKLVAPPLY
VLTTQTLDKNKGVEVLTAACEACQKSIEASRGKLVVKEAARAVSERDDRLLNEKLEQLEA
ANAEVDGDDESDEEEDTGMGDIDVEAGPAFVDV*

Transcript Sequence

Transcript ID

Cre12.g490000.t1.2
Transcript Infomation

pacid=30792971 locus=Cre12.g490000 annot-version=v5.6
Sequence

GTTATTAGCCTGAACCCGTATGCGCCTGTATATTTGGGTACGGCTAGAAATTCTTACTTA
GCAAGACTAAGAGACGAAATCGAACAGATCCTCTTTTCTTTCTTCACAAGCGCGCAAACA
TGGCGCAACACCAGGATTCCCGTATGTATGAAGCGAAGTACCCGGAGGTGGACGATGTGG
TAATGGTCCAGGTCAAGTCGATAGCGGAAATGGGCGCCTACGTCTCGCTGCTGGAGTACA
ATGGCATTGAGGGCATGATCCTGCTCTCTGAGCTTTCCAGGCGCCGCATTCGCTCTATCA
CAAAGCTTATCAAGGTCGGCCGCCAAGAGCCGGTGATGGTGCTGCGTGTTGATAAAGAGA
AGGGCTACATCGATCTGTCCAAGCGCCGCGTGTCGCCTGAGGACGTGGCGAAGTGCGAGG
AGCGCTACAACAAGTCCAAGCTGGTGCACTCCATCATGCGCCACGTGGCCGAGACCACGG
GGCGAGACCTGGAGGCGCTGTACGACAACATCGCCTGGCCGCTGTACAAGCTGTACGGGC
ACGCGTTCGACGCGTTCAAGACCATGGTGACGGACGAGGGCGATGCCATCTTCAAGAAGC
TCGAGGAGGAGAAGGGCGCCGCGGCCACCGCGCTGCTCTCATCCGAGGTGCGCGAGGCGC
TGCTGAAAAACATCAAGCGGCGCATGACCCCGCAGCCGCTGAAGATCCGTGCGGACGTGG
AGATGACGTGCTTCACCTACGACGGCATTGAGCACATCAAGAGCGCCATCCGCGCCGCGG
AGGCGACCAGCACGGAGGAGTGCCCCGTCAAGATGAAGCTGGTGGCGCCGCCGCTGTACG
TGCTCACCACACAGACATTGGACAAGAACAAGGGCGTTGAGGTCCTCACGGCGGCGTGCG
AGGCGTGCCAGAAGTCCATTGAGGCCAGCCGCGGCAAGCTGGTGGTGAAGGAGGCGGCGC
GCGCGGTGTCGGAGCGTGACGACCGCCTGCTCAACGAGAAGCTGGAGCAGCTGGAGGCAG
CCAACGCCGAGGTGGACGGCGACGACGAAAGCGACGAGGAGGAGGACACGGGTATGGGCG
ACATCGACGTGGAGGCCGGCCCCGCCTTCGTGGACGTATGAGCAGGCGGCCGCCGTGCGT
GTGGCTCGAGTTCGGGAGGAGGCATAGCAAGCGGCGTGGGGCTTGGGGCTGTGGCAGGGC
AGTGGTAGGTGTCGGGGAGACAGGCAACCTGGGGAGGGGTTGCGCAGGCGCAGCGCGCGG
GATGGGGACTTGCGCCGAGCCTGCGTGGTTGAAGGCGTGTGGTGCGCTTGGTGAGCGTGG
ACGAGGCGGTTAGCAGACAGATTAGATGCGGCATGCCAGCAGCAGTGGCCATTCCGTAGG
TATGCGTGCGGGTTGCGGGTATCTTGGGTTTCGGTGCACACGATACAGGTTCACACCAAC
TTTCGGTGGGTGGACGCACGGACGGGCAGTCGGGCACGCCAGCGCGCAGGAGGTGCGTGT
CCCGAGTGGCATGGAGCATGTAGGCAGGCGAGGTGGAGTGCAGGAGTGCAGTGCAGGGTT
CCGGATGTCTTGTTGGACGTCGGTGGAGGGCGCTAGGCGGCAATGGGGCGCTGCGTGGAC
TGGGGGCGTGGCGGAGCAGTGCCCAAGTCCTGGTGGCCGGTGAGATTTTCCGTGCTCTCT
GTTGAGCCTTACACTCTGGCCGCTGAGTCCGCCCCAAGCGTTGGGCGTCCCTATCAAAAC
ACTTGTTGCGT