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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g489700.t1.2
CDS Infomation

pacid=30792674 polypeptide=Cre12.g489700.t1.2 locus=Cre12.g489700 ID=Cre12.g489700.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCAAGCCCTTCGGAACCGCGTGGAGGCGCCCTGCAGCACCAGCAGCCGGTCCTGTAGC
CATGTACCAGTGCGGCGGCCTGCCACTAGCCGTCGTGCGCTGCACATTGTCGCAGCGCAG
TCGACGCAGCCCTACTGGTACAGTGCTAAGACCATCACGCCTCCCAAGAAGGGCAAGCAC
TTCCTGCACCTAGACGACTTCTCTAGGGATGAGCTGCTTGACATGCTGGAGAAGGCGAAG
CTGTGCAAGGCAAAATTCTACACACGTGACGAGTCGTTCAAGCCGTTCGCGGGCCAGACT
ATGGCGATGATCTTCACTAAGCCTTCGGCTCGCACGCGTGTCTCATTTGAGACGGGCTTC
TTCCGCCTGGGCGGCCACGCGCTGTACCTGGACCCCAACACCATCCAGCTGGGCAAGCGC
GAGCCCACCAAGGACATTGCCCGTGTGCTGTCCGGCTACAACGACGTCATCATGGCGCGC
CTGTTCGCGCACGCCGACCTGCTGGAGCTGGCCGAGTACAGCTCCGTGCCCATCATCAAC
GGCCTCACAGACTACAACCACCCCTGCCAGATCATGGCGGATGCGCTGACGCTGCTTGAG
CGCAAGGGCCGCGTTGAGGGCACCAAGGTGGTGTACGTGGGTGACGGCAACAACATCGTG
CACTCATGGCTGCGCCTGGCCACCCGGCTCTCGTTCGAGTTCGTGGTGGTTTGCCCGCCC
GGCTACGAGCCCTGCCAGAGCACTGTGGAGGGCGCGCGGGCGGCGGGCCTGTCGTCCATC
ACCGTCACGTCGGACATTAACGCGGTGAAGGGCGCGGACGTGATCTACACGGACGTGTGG
GCGTCCATGGGGCAGAAGGAGACCATCGACGAGCGCAAGATTGCGTTCGCGCCGTATCAG
GTGAACGAGAAGCTGATGGCGCTGGCGGGCGCGCAAGCGCTGTTCATGCACTGCCTGCCG
GCGGAGCGCGGGCTGGAGACCACGGACGGCGTGATGGAGAGCCCGCAGAGCGTGGTGTTC
CAGGAGGCGGAGAACCGCATGCACGCACAGAACGGCATCCTCTTGCACTGCCTGGCGGCC
ACCAAGAACCTGTAA

Peptide Sequence

PEP ID

Cre12.g489700.t1.2
PEP Infomation

pacid=30792674 transcript=Cre12.g489700.t1.2 locus=Cre12.g489700 ID=Cre12.g489700.t1.2.v5.5 annot-version=v5.6
Sequence

MQALRNRVEAPCSTSSRSCSHVPVRRPATSRRALHIVAAQSTQPYWYSAKTITPPKKGKH
FLHLDDFSRDELLDMLEKAKLCKAKFYTRDESFKPFAGQTMAMIFTKPSARTRVSFETGF
FRLGGHALYLDPNTIQLGKREPTKDIARVLSGYNDVIMARLFAHADLLELAEYSSVPIIN
GLTDYNHPCQIMADALTLLERKGRVEGTKVVYVGDGNNIVHSWLRLATRLSFEFVVVCPP
GYEPCQSTVEGARAAGLSSITVTSDINAVKGADVIYTDVWASMGQKETIDERKIAFAPYQ
VNEKLMALAGAQALFMHCLPAERGLETTDGVMESPQSVVFQEAENRMHAQNGILLHCLAA
TKNL*

Transcript Sequence

Transcript ID

Cre12.g489700.t1.2
Transcript Infomation

pacid=30792674 locus=Cre12.g489700 annot-version=v5.6
Sequence

CTCGATAATGCAGCGCTGCATTGTCTTGTTAGTGTGGTGTTACAGCTTGCCGCTTCAGTC
CTTACTTCACTTGCTTTACTGTATACACAAACTGCAACGTGCTGAGCTGATTGAGACAAA
TGCAAGCCCTTCGGAACCGCGTGGAGGCGCCCTGCAGCACCAGCAGCCGGTCCTGTAGCC
ATGTACCAGTGCGGCGGCCTGCCACTAGCCGTCGTGCGCTGCACATTGTCGCAGCGCAGT
CGACGCAGCCCTACTGGTACAGTGCTAAGACCATCACGCCTCCCAAGAAGGGCAAGCACT
TCCTGCACCTAGACGACTTCTCTAGGGATGAGCTGCTTGACATGCTGGAGAAGGCGAAGC
TGTGCAAGGCAAAATTCTACACACGTGACGAGTCGTTCAAGCCGTTCGCGGGCCAGACTA
TGGCGATGATCTTCACTAAGCCTTCGGCTCGCACGCGTGTCTCATTTGAGACGGGCTTCT
TCCGCCTGGGCGGCCACGCGCTGTACCTGGACCCCAACACCATCCAGCTGGGCAAGCGCG
AGCCCACCAAGGACATTGCCCGTGTGCTGTCCGGCTACAACGACGTCATCATGGCGCGCC
TGTTCGCGCACGCCGACCTGCTGGAGCTGGCCGAGTACAGCTCCGTGCCCATCATCAACG
GCCTCACAGACTACAACCACCCCTGCCAGATCATGGCGGATGCGCTGACGCTGCTTGAGC
GCAAGGGCCGCGTTGAGGGCACCAAGGTGGTGTACGTGGGTGACGGCAACAACATCGTGC
ACTCATGGCTGCGCCTGGCCACCCGGCTCTCGTTCGAGTTCGTGGTGGTTTGCCCGCCCG
GCTACGAGCCCTGCCAGAGCACTGTGGAGGGCGCGCGGGCGGCGGGCCTGTCGTCCATCA
CCGTCACGTCGGACATTAACGCGGTGAAGGGCGCGGACGTGATCTACACGGACGTGTGGG
CGTCCATGGGGCAGAAGGAGACCATCGACGAGCGCAAGATTGCGTTCGCGCCGTATCAGG
TGAACGAGAAGCTGATGGCGCTGGCGGGCGCGCAAGCGCTGTTCATGCACTGCCTGCCGG
CGGAGCGCGGGCTGGAGACCACGGACGGCGTGATGGAGAGCCCGCAGAGCGTGGTGTTCC
AGGAGGCGGAGAACCGCATGCACGCACAGAACGGCATCCTCTTGCACTGCCTGGCGGCCA
CCAAGAACCTGTAAGGAGCACCTGggtggcggcagcagcagcagcagcagcgatggcagc
agcggcggcagcggcggcagccggcgcaggctgtgagcagcggcgtcttcttgcagtgag
caaaatcaggagcaggagcgggagtggcttcaggagatggaggactggagcaagttgggc
ggcggcacggcactagcgtcggcgtgggcgccggagttgccgagcaggcggtgcAGGTTC
TTCCGGGGCACTGGATGCCTGCGCAGCGTCCGGCGTGATGTGGAGGGGTGCGGCGGCTAG
CGGAGGGTGCGAGGTGCTGGGCGCGAGGGGTTGCATGATGTCGACCGCGCCTATCTGCGC
CTATGTGCTTGTGTGCCTGTGGAATCGCAACTGCAAGGTTGCAGTATTATATGGTGTTGT
GAGTCCATGTACAAGGAGCGTGGGTATGTGGGCTGGGCCCGAGCTAGCAGCGAATGCGGG
CTGGTGTCGCGGTACGGTGAACGAGAAGATCAGTTACGGAAAGATTGACGAGTGACGGCA
CTGCCGTGGGCATAGCGGCCACCCCAGAATCTGGAATGGCCTGGCCATGATTGTAGGCAT
CGGACTCATGCGTTCGATAGGGCATTCGGTACCGCATACGAGAGGCATACTGCGTATGAG
CGAATAAGCTGCCAGGATGGCGGGATGGGTTGGGGTTGGGTTATTGCAGACCGAGATTGG
ACGGCGGCAAACCTGAGTGTTTGACCAGTCGAACTGAGATTTAACGGATCATGGGATTCT
GTGGAGTAACCTAGTCTCATGACTCTCATCCGCTGGTACATTGTACTTTGCGTAGAAGCA
TTTA