Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre12.g486900.t1.2
CDS Infomation

pacid=30792022 polypeptide=Cre12.g486900.t1.2 locus=Cre12.g486900 ID=Cre12.g486900.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGGCGCACCAAAGTATCACGTGGCGCCGATGGTGGACCAGTCCGAGTTGCCGTTCCGC
ATGCTGTGCCGTAATCACGGCGCCACGTGCGCCTACACGCCCATGCTGCACGCGCGCATC
TTCACGCAAGACAAGAAGTACAGGGAGGAGATGCTGACGACATGCACAGAGGACCGGCCG
CTGTTTGTGCAGTTTTGCTCCAACGAGCCGCAGCACCTGCTCAAGGCGGCGCGCATGGTG
GAGGCGATGGGCATCTGCGACGCCATCGACATCAACTTCGGCTGCCCGCAGCGCATCGCC
AAGCGGGGCGGCTACGGCGCGTTCCTAATGGATGACCTACCCAAGGTGGAGGCCATGGTG
CGGGGCCTGGCGCAGGGCCTGCGCATCCCCGTCACGGCCAAGATCCGCATCTTCCCCGAC
CTGGCCAAGACGGTGGAGTACGCGCGCATGGTGGAGCGCGCCGGCGCATGGCTGGTGGCG
GTGCACGGCCGGCTGCGGGAGCAGAAGGACCTGTCCGCCACGCGCGCGGACTGGGACGCC
ATCCGCGCCGTCAAGGCCGCGCTGTCGGTGCCGGTGCTGGCCAACGGCAACATCCGGCAC
CTGGGTGACGTGGACGCCTGCCTGGCCTACACCGGCTGCGACGGCGTGCTCAGCGCGGAG
GGGTTGCTGGCGGACCCGGCGCTGTTCGCGCCGCGCCGGGAGCCGGTGGCGAGCGGCGAC
TACGCCGCGCCGCCTGGCGAGCGGTTAGCTCTGGCGGCCGAGTACCTGGCGCTGGTGGCG
GCACACCCAGTGCCGCTGCGTATGGTGCGGGGGCACGTGCACAAGCTGATGTGGGACTGG
CTGGCGGAGCACACGGACCTGCGGGAGCGGATCAACCGGGGCGTGCCCAGCCTGGGCCTG
TTCACCGAGACGGTTGAGGAGGTGCGGCGGCGGGCGGAGGCGGCGGGTCGCGACTACCCA
GTGCCGGCCATGAGTGCAGCGGAGCTTGCGGCGCTGGACAAGGAGGAGGCCAGGCGGGCG
GCCATCGAGGAGCAGGAGCGCGAGGCGGACGCTCTGGATCGGCTACAGCACCGGCGAGCA
GGCGGCGGCTGTGGCGAGTGCGGCGGCGGTGGCGAGGAGGAGGAGGAGGAGCTGGTCATT
GACTGGAGCGCGATGGGCATCGAATAG

Peptide Sequence

PEP ID

Cre12.g486900.t1.2
PEP Infomation

pacid=30792022 transcript=Cre12.g486900.t1.2 locus=Cre12.g486900 ID=Cre12.g486900.t1.2.v5.5 annot-version=v5.6
Sequence

MGAPKYHVAPMVDQSELPFRMLCRNHGATCAYTPMLHARIFTQDKKYREEMLTTCTEDRP
LFVQFCSNEPQHLLKAARMVEAMGICDAIDINFGCPQRIAKRGGYGAFLMDDLPKVEAMV
RGLAQGLRIPVTAKIRIFPDLAKTVEYARMVERAGAWLVAVHGRLREQKDLSATRADWDA
IRAVKAALSVPVLANGNIRHLGDVDACLAYTGCDGVLSAEGLLADPALFAPRREPVASGD
YAAPPGERLALAAEYLALVAAHPVPLRMVRGHVHKLMWDWLAEHTDLRERINRGVPSLGL
FTETVEEVRRRAEAAGRDYPVPAMSAAELAALDKEEARRAAIEEQEREADALDRLQHRRA
GGGCGECGGGGEEEEEELVIDWSAMGIE*

Transcript Sequence

Transcript ID

Cre12.g486900.t1.2
Transcript Infomation

pacid=30792022 locus=Cre12.g486900 annot-version=v5.6
Sequence

GTTATGGCTTGCACCACTCATGGCTTGCACACCAAGTAGGCATCTTAAGAGGGGCACGGT
CGCATGACCCGCCAGGGCGGCCGCTATTGAGTGGTACAGGATATCCACTTGATGAGGAAG
GAAATCAACCCGCTGCAGCCGCCCGCCTCAGGGCAACCCGGAAGCAACTGGACCCCGCTC
CGAGTGTGATACATATTTATAAGGGATTACTGTTTGCAAGTAATTGCTTGGGCACTGTAG
CTGCTGAAGGTGAGGAGCGCTTCCCAAGTTCCCATGCCGCTCAATTGCTCATCGGGTTCT
GCAGGAAACTTGAATCGTGGACATTGCTTTTTAATAATTGTAGACGTAGCTTTATGAGCT
TCTTCTTTCGTCACCATAATTGAACAAAGCTGCCGCCGTGACGCCGACCTCTCGAATTCT
TGCATTGTCATCAAGCCCCATTCAAGCTGTTCGACATTGACTCTATACAACGGCGCGCTC
CTTACTGAAGCCCCTCGCAAACTTTGCGCGCTGTGCGCGCGCGCGTTTGGTGAACAAGTT
GTTGTAGCCAGCGTGTTCTCAGGGACCACTCATAGACACGGGCGCTACAACAAGCATACG
ATGACAGTCGCGGCACCGCCGGCTAGCTCGGCGGCGGCGGTCGCAGCACCCGAGCCATCG
GCATCGCCTTCCTGCGTGGAGCGGGCCCCTCAAGCAGACAAAGCGTGGGAGTGGTTTAGA
AGCATGGGCGCACCAAAGTATCACGTGGCGCCGATGGTGGACCAGTCCGAGTTGCCGTTC
CGCATGCTGTGCCGTAATCACGGCGCCACGTGCGCCTACACGCCCATGCTGCACGCGCGC
ATCTTCACGCAAGACAAGAAGTACAGGGAGGAGATGCTGACGACATGCACAGAGGACCGG
CCGCTGTTTGTGCAGTTTTGCTCCAACGAGCCGCAGCACCTGCTCAAGGCGGCGCGCATG
GTGGAGGCGATGGGCATCTGCGACGCCATCGACATCAACTTCGGCTGCCCGCAGCGCATC
GCCAAGCGGGGCGGCTACGGCGCGTTCCTAATGGATGACCTACCCAAGGTGGAGGCCATG
GTGCGGGGCCTGgcgcagGGCCTGCGCATCCCCGTCACGGCCAAGATCCGCATCTTCCCC
GACCTGGCCAAGACGGTGGAGTACGCGCGCATGGTGGAGCGCGCCGGCGCATGGCTGGTG
GCGGTGCACGGCCGGCTGCGGGAGCAGAAGGACCTGTCCGCCACGCGCGCGGACTGGGAC
GCCATCCGCGCCGTCAAGGCCGCGCTGTCGGTGCCGGTGCTGGCCAACGGCAACATCCGG
CACCTGGGTGACGTGGACGCCTGCCTGGCCTACACCGGCTGCGACGGCGTGCTCAGCGCG
GAGGGGTTGCTGGCGGACCCGGCGCTGTTCGCGCCGCGCCGGGAGCCGGTGGCGAGCGGC
GACTACGCCGCGCCGCCTGGCGAGCGGTTAGCTCTGGCGGCCGAGTACCTGGCGCTGGTG
GCGGCACACCCAGTGCCGCTGCGTATGGTGCGGGGGCACGTGCACAAGCTGATGTGGGAC
TGGCTGGCGGAGCACACGGACCTGCGGGAGCGGATCAACCGGGGCGTGCCCAGCCTGGGC
CTGTTCACCgagACGGTTGAGGAGGTGCGGCGGCGGGCGGAGGCGGCGGGTCGCGACTAC
CCAGTGCCGGCCATGAGTGCAGCGGAGCTTGCGGCGCTGGACAAGGAGGAGGCCAGGCGG
GCGGCCATCGAGGAGCAGGAGCGCGAGGCGGACGCTCTGGATCGGCTACAGCACCGGCGA
GCAGGCGGCGGCTGTGGCGAGTGCGGCGGCGGTGGCGAGGAGGAGGAGGAGGAGCTGGTC
ATTGACTGGAGCGCGATGGGCATCGAATAGAGGCAATGCAGGGAATGACAGGGTGGTGTA
CAGGGGGATACGCTTTGCAGGAGCAAAGGCTGCGCGCGTGTGCAAGGACGGGGGCTTGAC
GCGTGATACCGGGTCAGAATATGTCAATGAGCTGACAGAGTGAGCAAATGCAGGTCTGTG
CGCATGAGCGAGGGGAAGTGTATATCATAAGCATTCACCTTACAATCGGAATGGGGCCTA
ACTGTTCAGGCGGCTGCACGCGTTGTGCACTTATGCGTGGTACCGTGCCTGCTACGTGCC
TGCAGCTGGAATCGATAGATAATGACTGCATACCTTGAGGTTTGAAAGACTGATGACTCG
TGGGGAGGTACCTTTGAAATGCGCGTCATCTGATTCCGGAGACGCGGAGACGCCTCTCAG
TGAGTGCCGTTGTGTTTCGTGAAGATTGACACTCGTAGGCAGGGCCGCAGACGTCTTGTG
AACTGCTATGCAAGCACGCTTGAATGCAACGATTTAGCATGTTAAGACGATATTAAATGG
TGCGGACGGGGAAGATGGGCGAACGGCACAGGCGCACCGTGGCCGTGTGCCTCTGGATCC
GGAGTCGGCCCTTTGAGGGAAGAAGACACCATGTGTTTCAGGACTGTCATGATTGTCGAT
AAATACTGA