Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre10.g441000.t1.2
CDS Infomation

pacid=30790298 polypeptide=Cre10.g441000.t1.2 locus=Cre10.g441000 ID=Cre10.g441000.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCGGAGCTTGAGGATGATGTCCTCGTTCAGGCCGGCGAGCAGGACGATGCCAACGAC
CTCAACCGGCAGCTGTTCGGTGCCGATAGCGACGATGAGGGCGCGCCGCCCGCGGCCGAC
CCGCACGCCCAGGCGCAGCACCTGGCGGAGCAGGAGGCGCTGCTGGAGGATGACTTGGAG
GACGCAGACGTAGACGCCGAGGCGGCGCTAGAGGACGAGCTGTCGGGCGGCAGCAGCGAC
GACGGCGGGGCGGTCAAGAAGGGCAAGAAGGATAAGAAGCTGCGCAAGAAGCGCGAGGGT
GGCAAGGACGACAAGCCCAAAAAGAAGCGCCAGCGGGGCGAGGGCGGCAAGGGTGAGAAG
GGCGACAAGGCGGGAAAGAAGGGCAAAGCCCCGAAGGAGACCATCGCCACGGGCAGGTCT
CGGCGGACGCCGGGCGGTGGCGAGGCGGGCGAGGAGCAGCAGCCGCGCCCACGCCGCCCC
GTGGGCGAGGGCGGAGACGACCTGCCCAGTGATGAGCTGCAGGAGCAGGAGGCGGACCGT
GCCTTCATTGACGATGACGGTGCGGAGCCGGTTGCCAGTGATGATGAGAATGCGCCGCGT
GTGGTGGCGGACGAGGCGGAGGAGGCGATTGACGCGGACGAGGACCACCCCTTCAAGCGC
AAGAAGCGGAAGAAGGAGAACACCGGCAACGTGGAGCTGGAGATCAAGGAGATGCTGGGC
AAGATGGAGGCGGCCATGGAGCATGACTTCGAGACGGTGGCGCGCAACGCGGGCGTGGAG
CTGAAGAAGGACAGCGGCGACAACCTGGTGACGGACGCGGAGGGGCACTACGTGGTGGCG
CGCAAGGGGCCGCCGCCGGCCTCCAAGAGCCCCGCCATCAGCAAGCTCAGGCTGCTGCCG
GAGCTGGAGCTGTTCCTGGCGCAGCGCAAGTACCACGAGAGCTTCCTGCAGCAGGGCGGG
CTGGGTGTGCTGAAGGGCTGGCTGGAGCCCTACTTTGACGGCACGCTGCCCACCATGCGC
GTGCGCACGGCGGTGCTCAAGGGGCTGCAGACCCTGCCCATCGACACGCGATTTGAGGAC
CACAAGGAGATGCTGCGCAAAAGCCAGGTGGGCAAGAACGTGATGTTCCTGTTCAAGTGC
TCGGAGGAGACGGCCGACAACCGCCGCATCGCCAAGGAGCTGGTGCACCGCTGGAGCAGA
CCCATCTTCTACGACCAGGAGGCGGAGGAGGCCAAGAAGCAGCTGCACCAGCAGCAGCTG
CTGGAGGCTCGGCGCATGGAGCTGGAGCGCCGCCAGGCAGACGGCGGCGAGGAGGACAAG
AGCGCGTCGGCGCAAGTGCGCAACAAGGCCATGCGCATCCACGCGCTCATCCCGCGGGCG
TCCAAGCTGGACTACGTGAACAACCCGGGTGCGGCCAAGGACTTCAACGAGAGCGAGGTG
GCCAACGCCGCCGCCGCCGCCGGCCCCAAGTCCAAGCAGGTGGACGCGCTCACCAAGCGC
CTGCGTGAGCAGCAGAAGAAGCTCAAGGACGGCAGCGCACGCGCCATGAAGCCCAGTGTG
GAGGGCCGCAACATTGTGCTCATGAAGTAG

Peptide Sequence

PEP ID

Cre10.g441000.t1.2
PEP Infomation

pacid=30790298 transcript=Cre10.g441000.t1.2 locus=Cre10.g441000 ID=Cre10.g441000.t1.2.v5.5 annot-version=v5.6
Sequence

MAELEDDVLVQAGEQDDANDLNRQLFGADSDDEGAPPAADPHAQAQHLAEQEALLEDDLE
DADVDAEAALEDELSGGSSDDGGAVKKGKKDKKLRKKREGGKDDKPKKKRQRGEGGKGEK
GDKAGKKGKAPKETIATGRSRRTPGGGEAGEEQQPRPRRPVGEGGDDLPSDELQEQEADR
AFIDDDGAEPVASDDENAPRVVADEAEEAIDADEDHPFKRKKRKKENTGNVELEIKEMLG
KMEAAMEHDFETVARNAGVELKKDSGDNLVTDAEGHYVVARKGPPPASKSPAISKLRLLP
ELELFLAQRKYHESFLQQGGLGVLKGWLEPYFDGTLPTMRVRTAVLKGLQTLPIDTRFED
HKEMLRKSQVGKNVMFLFKCSEETADNRRIAKELVHRWSRPIFYDQEAEEAKKQLHQQQL
LEARRMELERRQADGGEEDKSASAQVRNKAMRIHALIPRASKLDYVNNPGAAKDFNESEV
ANAAAAAGPKSKQVDALTKRLREQQKKLKDGSARAMKPSVEGRNIVLMK*

Transcript Sequence

Transcript ID

Cre10.g441000.t1.2
Transcript Infomation

pacid=30790298 locus=Cre10.g441000 annot-version=v5.6
Sequence

GAAAAAGCTGCCATATCAATACCGTAATTCATTTGTGTGAAGCAGGGTGCACAGTTGCAC
AAGACTCAGATAGCCAACTTCCCGGAGTGCCCTGCTTTCTTGGCAGGGACGGACGCTGTG
GTCAATTATTGATAAGATTTGCACAAAACAGCCTCGCACCAGGCGCTAGGGCCTGTCTCA
GGCCGCCCTCGAGGCGTGCAAGGGCGCAGCAGCAGCCCGTAGCCCAGCATGGCGGAGCTT
GAGGATGATGTCCTCGTTCAGGCCGGCGAGCAGGACGATGCCAACGACCTCAACCGGCAG
CTGTTCGGTGCCGATAGCGACGATGAGGGCGCGCCGCCCGCGGCCGACCCGCACGCCCAG
GCGCAGCACCTGGCGGAGCAGGAGGCGCTGCTGGAGGATGACTTGGAGGACGCAGACGTA
GACGCCGAGGCGGCGCTAGAGGACGAGCTGTCGGGCGGCAGCAGCGACGACGGCGGGGCG
GTCAAGAAGGGCAAGAAGGATAAGAAGCTGCGCAAGAAGCGCGAGGGTGGCAAGGACGAC
AAGCCCAAAAAGAAGCGCCAGCGGGGCGAGGGCGGCAAGGGTGAGAAGGGCGACAAGGCG
GGAAAGAAGGGCAAAGCCCCGAAGGAGACCATCGCCACGGGCAGGTCTCGGCGGACGCCG
GGCGGTGGCGAGGCGGGCGAGGAGCAGCAGCCGCGCCCACGCCGCCCCGTGGGCGAGGGC
GGAGACGACCTGCCCAGTGATGAGCTGCAGGAGCAGGAGGCGGACCGTGCCTTCATTGAC
GATGACGGTGCGGAGCCGGTTGCCAGTGATGATGAGAATGCGCCGCGTGTGGTGGCGGAC
GAGGCGGAGGAGGCGATTGACGCGGACGAGGACCACCCCTTCAAGCGCAAGAAGCGGAAG
AAGGAGAACACCGGCAACGTGGAGCTGGAGATCAAGGAGATGCTGGGCAAGATGGAGGCG
GCCATGGAGCATGACTTCGAGACGGTGGCGCGCAACGCGGGCGTGGAGCTGAAGAAGGAC
AGCGGCGACAACCTGGTGACGGACGCGGAGGGGCACTACGTGGTGGCGCGCAAGGGGCCG
CCGCCGGCCTCCAAGAGCCCCGCCATCAGCAAGCTCAGGCTGCTGCCGGAGCTGGAGCTG
TTCCTGGCGCAGCGCAAGTACCACGAGAGCTTCCTGCAGCAGGGCGGGCTGGGTGTGCTG
AAGGGCTGGCTGGAGCCCTACTTTGACGGCACGCTGCCCACCATGCGCGTGCGCACGGCG
GTGCTCAAGGGGCTGCAGACCCTGCCCATCGACACGCGATTTGAGGACCACAAGGAGATG
CTGCGCAAAAGCCAGGTGGGCAAGAACGTGATGTTCCTGTTCAAGTGCTCGGAGGAGACG
GCCGACAACCGCCGCATCGCCAAGGAGCTGGTGCACCGCTGGAGCAGACCCATCTTCTAC
GACCAGGAGGCGGAGGAGGCCAAGAAGCAGCTGCACCAGCAGCAGCTGCTGGAGGCTCGG
CGCATGGAGCTGGAGCGCCGCCAGGCAGACGGCGGCGAGGAGGACAAGAGCGCGTCGGCG
CAAGTGCGCAACAAGGCCATGCGCATCCACGCGCTCATCCCGCGGGCGTCCAAGCTGGAC
TACGTGAACAACCCGGGTGCGGCCAAGGACTTCAACGAGAGCGAGGTGGCCAAcgccgcc
gccgccgccggccccAAGTCCAAGCAGGTGGACGCGCTCACCAAGCGCCTGCGTGAGCAG
CAGAAGAAGCTCAAGGACGGCAGCGCACGCGCCATGAAGCCCAGTGTGGAGGGCCGCAAC
ATTGTGCTCATGAAGTAGCGAGGCGAGGTGCTGCGGCAGCTGTTGTGTTGGACTGGCGGT
GGCGTAGCTTAGGTAGCTCCGTAGCTGGGGTGGTGATGAGGCGGTTCAGGTGCAGTGATG
AACGACACAACGCGAGCGCATTGGCAGGTGTAGCGATGGGCAGCAAGACGCAAGGAGGCG
TGTTGCGGCGACTGGAGGTGTTGGGAGGGGGACAGTTGATGCCGGTTGGCTGATTCAGGC
TGATTGGCAAGCGGGTGGAGCTGCGGGTCAATGGTGTAAGTATACCCGTTGCGATTGCAG
TCTCCACTACTTACAGCCCACCCTCGCCAGTGGACTGTTACTGTCCAGCCGACCGGGGGC
ATCCGAGGCGTGGGACATCCAAGGCCCTCCCGCACTCGCCGAGTCGCCGCGTTCCTACAC
AAAGCAACAATGTGCTTAGTCAACGCCTAGGACAGGCGACAACCGGAACGATGTAAGAGG
GCTGAGTA