Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre10.g439100.t1.2
CDS Infomation

pacid=30790162 polypeptide=Cre10.g439100.t1.2 locus=Cre10.g439100 ID=Cre10.g439100.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCCACAGCTCTTCAAGGGCCGCGTCTCCAGATTGCCGGAGACCGGCAGAGCGGCCAG
GACGTGCGGACGCAGAATGTGATGGCTGTCACGGCTGTTGCAAATATCGTTAAGAGCAGC
CTTGGTCCCGTTGGTCTCGATAAGATGCTGGTGGACGACATTGGTGATGTGACGATCACG
AACGACGGCGCCACCATTCTGCGGTTGCTGGAGGTGGAGCACCCGGCCGCCAAGATCCTG
GTGGAGCTGGCGGAGCTGCAGGACTCGGAGGTGGGCGACGGCACCACCAGTGTGGTCATC
CTGGCGGCGGAGCTGCTGAAGCGTGCGAACGAGCTGGTGAAGAACAAAATCCACCCCACC
AACATCATCAGCGGATACCGTATCGCCATGCGCGAGGCCTGCAAGTTCATCGAGGAGAAG
ATGGCCATCCCCACCGAGTCGCTGGGCACGGAGACGCTGCTGAACACGGCGCGCACCAGC
ATGAGCTCCAAGATCGTGGGCGCGGAGGGCGACTTCTTCGCCAACATGGTGGTGGACGCC
ATGAGCGCCGTCAAGACAGTGGACGACATCACCGGCAAGGCCCGCTACCCGGTCAAGGCC
GTGAACGTGCTCAAGGCGCACGGCAAGAGCGCTCGCGAGTCGACGCTGCTCCGCGGCTAC
GCGCTGAACCTTGCCCGCGCGGCGCAGGGCATGCCCAAGCGCCTGGCGCCAGAGGGCGGC
ATTAAGATTGCCTGCCTGGACATGAACCTGCAAAAGGCGCGCATGATGATGGGCGTGCAG
GTGCTGGTGTCGGACCCCAAGGAGCTGGAGAAGATTCGCGAGCGCGAGAACGACATCACC
AAGGAGCGCATCCAGAAGATCCTGGCCTCGGGCGCCAACGTGGTGCTCACAACCAAGGGC
ATTGACGACATGGCGCTCAAGTACTTTGTGGAGGCGGGCGTGGTGGCGTGCCGCCGCGTG
GAGAAGGACGACCTGCGCCGCATCGCCAAGGCCACTGGCGCCACGATGGTGATGACGCTG
GCGGACATGGAGGGCAACGAGACCTTCGACCCGGCGCACCTGGGCAGCGCCGAGGAGGTG
GTGGAGGAGCGCGTGGCGGACGACAACATGATCATGATCAAGGGCTGCAAGTACAGCAAG
GCCGTGACGCTGCTGCTGCGCGGCGCCAACGACTACATGCTGGACGAGATGGACCGCTCC
ATCCACGACTCGCTCTGCGTCGTCAAGCGCGTCTTGGAGAGCGGCAGCGTGGTGGCAGGC
GGCGGCGCGGTGGAGGCGGCTCTGTCCATATTCCTGGAGAACCACGCCACCACGCTGGGC
AGCCGCGAGCAGCTGGCCATCGGCGAGTTCGCCAACTCGCTGCTGGTGCTGCCCAAGACG
CTGGCGGTCAACGCCGCCAAGGACGCCACGGAGCTGGTCGCTGCGCTGCGCGCGCTGCAC
TACAAGTCGCAGACCGTGGAGTCCGAGGCCAAGCTGTGCCAGATGGGCCTGGACCTGGTG
GAGGGCCGCGTGCGCAACAACGTGGAGGCGGGCGTGCTAGAGCCGGCCATGAGCAAGATC
AAGATGATCCAGTTCGCGACGGAGGCGGCCATCACCATCCTGCGCATCGACGACCTGATC
CGGTTGGAAGCACAGGGCGACGGCGGCGACGATTGA

Peptide Sequence

PEP ID

Cre10.g439100.t1.2
PEP Infomation

pacid=30790162 transcript=Cre10.g439100.t1.2 locus=Cre10.g439100 ID=Cre10.g439100.t1.2.v5.5 annot-version=v5.6
Sequence

MATALQGPRLQIAGDRQSGQDVRTQNVMAVTAVANIVKSSLGPVGLDKMLVDDIGDVTIT
NDGATILRLLEVEHPAAKILVELAELQDSEVGDGTTSVVILAAELLKRANELVKNKIHPT
NIISGYRIAMREACKFIEEKMAIPTESLGTETLLNTARTSMSSKIVGAEGDFFANMVVDA
MSAVKTVDDITGKARYPVKAVNVLKAHGKSARESTLLRGYALNLARAAQGMPKRLAPEGG
IKIACLDMNLQKARMMMGVQVLVSDPKELEKIRERENDITKERIQKILASGANVVLTTKG
IDDMALKYFVEAGVVACRRVEKDDLRRIAKATGATMVMTLADMEGNETFDPAHLGSAEEV
VEERVADDNMIMIKGCKYSKAVTLLLRGANDYMLDEMDRSIHDSLCVVKRVLESGSVVAG
GGAVEAALSIFLENHATTLGSREQLAIGEFANSLLVLPKTLAVNAAKDATELVAALRALH
YKSQTVESEAKLCQMGLDLVEGRVRNNVEAGVLEPAMSKIKMIQFATEAAITILRIDDLI
RLEAQGDGGDD*

Transcript Sequence

Transcript ID

Cre10.g439100.t1.2
Transcript Infomation

pacid=30790162 locus=Cre10.g439100 annot-version=v5.6
Sequence

ATATTGCGTGTCTGCTTACATCACACAACACCTGACCTGCGCGCCAGACAGAGATCCATC
GATTCCCGCTAAGTCACGCTGCACCAAGTACACAAGGCGCTGAGAGACATTGTAGCAGCT
TCTACCTGCTTATAACTTTAGGACCATGGCCACAGCTCTTCAAGGGCCGCGTCTCCAGAT
TGCCGGAGACCGGCAGAGCGGCCAGGACGTGCGGACGCAGAATGTGATGGCTGTCACGGC
TGTTGCAAATATCGTTAAGAGCAGCCTTGGTCCCGTTGGTCTCGATAAGATGCTGGTGGA
CGACATTGGTGATGTGACGATCACGAACGACGGCGCCACCATTCTGCGGTTGCTGGAGGT
GGAGCACCCGGCCGCCAAGATCCTGGTGGAGCTGGCGGAGCTGCAGGACTCGGAGGTGGG
CGACGGCACCACCAGTGTGGTCATCCTGGCGGCGGAGCTGCTGAAGCGTGCGAACGAGCT
GGTGAAGAACAAAATCCACCCCACCAACATCATCAGCGGATACCGTATCGCCATGCGCGA
GGCCTGCAAGTTCATCGAGGAGAAGATGGCCATCCCCACCGAGTCGCTGGGCACGGAGAC
GCTGCTGAACACGGCGCGCACCAGCATGAGCTCCAAGATCGTGGGCGCGGAGGGCGACTT
CTTCGCCAACATGGTGGTGGACGCCATGAGCGCCGTCAAGACAGTGGACGACATCACCGG
CAAGGCCCGCTACCCGGTCAAGGCCGTGAACGTGCTCAAGGCGCACGGCAAGAGCGCTCG
CGAGTCGACGCTGCTCCGCGGCTACGCGCTGAACCTTGCCCGCGCGGCGCAGGGCATGCC
CAAGCGCCTGGCGCCAGAGGGCGGCATTAAGATTGCCTGCCTGGACATGAACCTGCAAAA
GGCGCGCATGATGATGGGCGTGCAGGTGCTGGTGTCGGACCCCAAGGAGCTGGAGAAGAT
TCGCGAGCGCGAGAACGACATCACCAAGGAGCGCATCCAGAAGATCCTGGCCTCGGGCGC
CAACGTGGTGCTCACAACCAAGGGCATTGACGACATGGCGCTCAAGTACTTTGTGGAGGC
GGGCGTGGTGGCGTGCCGCCGCGTGGAGAAGGACGACCTGCGCCGCATCGCCAAGGCCAC
TGGCGCCACGATGGTGATGACGCTGGCGGACATGGAGGGCAACGAGACCTTCGACCCGGC
GCACCTGGGCAGCGCCGAGGAGGTGGTGGAGGAGCGCGTGGCGGACGACAACATGATCAT
GATCAAGGGCTGCAAGTACAGCAAGGCCGTGACGCTGCTGCTGCGCGGCGCCAACGACTA
CATGCTGGACGAGATGGACCGCTCCATCCACGACTCGCTCTGCGTCGTCAAGCGCGTCTT
GGAGAGCGGCAGCGTGGTGGCAGGCGGCGGCGCGGTGGAGGCGGCTCTGTCCATATTCCT
GGAGAACCACGCCACCACGCTGGGCAGCCGCGAGCAGCTGGCCATCGGCGAGTTCGCCAA
CTCGCTGCTGGTGCTGCCCAAGACGCTGGCGGTCAACGCCGCCAAGGACGCCACGGAGCT
GGTCGCTGCGCTGCGCGCGCTGCACTACAAGTCGCAGACCGTGGAGTCCGAGGCCAAGCT
GTGCCAGATGGGCCTGGACCTGGTGGAGGGCCGCGTGCGCAACAACGTGGAGGCGGGCGT
GCTAGAGCCGGCCATGAGCAAGATCAAGATGATCCAGTTCGCGACGGAGGCGGCCATCAC
CATCCTGCGCATCGACGACCTGATCCGGTTGGAAGCACAGGGCGACGGCGGCGACGATTG
AGCGAGGACGGGCGTGCTCTTAGGAGTGGCGAGACAGGGCGTGGCGGGGCGTGCGGTGGG
ACACTAGGGTACATAGCTAGGCGGCGCCAGGTGTTCATCATGCGGATGGCGCAGATGTTT
GGTCGTCATTACATGGCCTGGCGTGAGGGGCCCAGGTGCGAGGGGGGACGTCTGCAAGGC
AGCCACGCCAATTGCGGAGCTGTCGGGGCAGGTCGGGGCTAGTTGTAATCGGTGAGGCGG
CTGACGTGGTGAGGTGGCTCGCGCAAGGGGTGGAGAGGCCGGAGGGGCCGATGGCATGAA
GCCGCTCTTTGTCAAGGGTCGGGTGGACTCGCTC