Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g410800.t1.2
CDS Infomation

pacid=30780896 polypeptide=Cre09.g410800.t1.2 locus=Cre09.g410800 ID=Cre09.g410800.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCCACCGTTGAGAAGAAGTACCCATATGCGCTCGACTCCGAGGGGAAAGCTAAATAT
GTGCCGGTATGGCGCTTCACGCAACCACACATGATGGCCTTCCACCTGTCCTGGATTTGC
TTCTTCATGTCCTTCGTCGCTACATTTGCGCCTGCCTCGCTCGCGCCCGTTATCCGTGAT
GACCTGTTCCTGACCAAGTCGGAGGTGGGCAACGCCGGCGTCTCCGCCGTGTGCGGTGCC
ATCGCGGCGCGTCTCTTCATGGGCATCTTCGTCGACGTCGTAGGTCCCCGCTACGGCGCC
GCTGCCGCCATGCTCATGACCGCACCCGCCGTCTTCTGCATGGCCCTGGTCACCGACTTC
TCCACCTTCGCCTGTGTGCGCTTCTTTATCGGTCTCTCGCTCTGCATGTTCGTGTGCTGC
CAGTTCTGGTGCGGTACCATGTTCAACGTGCAAATCGTCGGCACCGCCAACGCCATCGCC
GCCGGCTGGGGCAACATGGGTGGCGGCGCTTGCCACTTCATCATGCCGCTCATCTACCAG
GGCATCAAGGACGGCGGCGTTCCCGGCTACCAGGCCTGGCGTTGGGCTTTCTTCGTCCCC
GGCGGCATCTACATTGTCACCGCCACCCTGACCCTGCTCCTGGGCATTGACCACCCCAGC
GGCAAGGACTACCGTGACCTGAAGAAGGAGGGCACGCTCAAGGCCAAGGGCAACATGTGG
CCAGTCATCAAGTGCGGCCTCGGCAACTACAGGTCTTGGATTCTGGCCCTGACCTACGGC
TACTCCTTCGGCGTCGAGCTGACAGTTGATAACGTCATTGTAGAGTACCTCTTTGACCAG
TTTGGCCTCAACCTTGCGGTGGCGGGCGCCCTCGGCGCCATCTTCGGCCTTATGAACATC
TTCTCTCGTGCTACCGGCGGCATGATCTCTGATTTGATTGCCAAGCCGTTCGGCATGCGC
GGCCGGCTGTGGGTGCTGTGGATTACGCAAACGCTCGGCGGCATCTTCTGCATTATCATG
GGCAAGGTCAGCAACTCGCTAACGGCCACCATCGTCATCATGATCATCTTCTCCATCTTC
TGCCAGCAAGCATGCGGCATGCACTTCGGCATCACGCCCTTTGTTTCCCGTCGCGCCTAC
GGTGTCGTGTCTGGTCTGGTGGGTGCCGGCGGCAACGTGGGAGCGGCCATCACGCAAGCG
ATCTGGTTTTCTGGCACCGCCACCTGGCAGATCAACCTGTCCCGCCCAGATAGCTTTGTG
TGGATGGGCGTGCAGGCTGTGGCGCTCACGGTGGCCGTCATGTTCATCTGGTTCCCCATG
TGGGGCTCCATGTTCACTGGGCCGCGCGAGGGCGTGGAGGAGGAGGACTACTACCTGCGC
GAGTGGAGCGCGGAGGAGGTGGCTCAGGGGCTGCACCAGGGCTCGATGCGCTTCGCCATG
GAGTCGAAGTCCCAGCGCGGCTACAAAGACAAGCGAATGCTGGACGCCGTTGGTGAGACC
GCCTCTGCTGACGTGGCCGCCGTGAAAGCAACCGTGGCATAA

Peptide Sequence

PEP ID

Cre09.g410800.t1.2
PEP Infomation

pacid=30780896 transcript=Cre09.g410800.t1.2 locus=Cre09.g410800 ID=Cre09.g410800.t1.2.v5.5 annot-version=v5.6
Sequence

MATVEKKYPYALDSEGKAKYVPVWRFTQPHMMAFHLSWICFFMSFVATFAPASLAPVIRD
DLFLTKSEVGNAGVSAVCGAIAARLFMGIFVDVVGPRYGAAAAMLMTAPAVFCMALVTDF
STFACVRFFIGLSLCMFVCCQFWCGTMFNVQIVGTANAIAAGWGNMGGGACHFIMPLIYQ
GIKDGGVPGYQAWRWAFFVPGGIYIVTATLTLLLGIDHPSGKDYRDLKKEGTLKAKGNMW
PVIKCGLGNYRSWILALTYGYSFGVELTVDNVIVEYLFDQFGLNLAVAGALGAIFGLMNI
FSRATGGMISDLIAKPFGMRGRLWVLWITQTLGGIFCIIMGKVSNSLTATIVIMIIFSIF
CQQACGMHFGITPFVSRRAYGVVSGLVGAGGNVGAAITQAIWFSGTATWQINLSRPDSFV
WMGVQAVALTVAVMFIWFPMWGSMFTGPREGVEEEDYYLREWSAEEVAQGLHQGSMRFAM
ESKSQRGYKDKRMLDAVGETASADVAAVKATVA*

Transcript Sequence

Transcript ID

Cre09.g410800.t1.2
Transcript Infomation

pacid=30780896 locus=Cre09.g410800 annot-version=v5.6
Sequence

CTCGGCCAAACGAACAAAGACCGGCACACGTGCTAAGACCGAGCACATGTGCCTGCTCGT
CTGCGGGCGAGCACAAGCTTTGCGTGCAAATAAGGACGCAGCGTTTGCGATCGAGGCTGT
CATTAGTCAGACACGGACGTGGCTTTGCGGACGCTGAAGCTTGAGACGCGCCCCTTCCGC
GGCTCCAGTGAATAATTGGACCACAACGAGACATTTCAGATGCGATGCGCTGGCCGTTGA
CGAGGGGTCACTGTGGAAACGAAAAGTGGGTGCGCCCCGTGCACGAAGGGGCGCAGCAGA
GTTTTCATCTCCATCGGCCCCCATAAATTCGGTAGTTCACAACCCGTGTTTCTTAATACA
ACTTAGTGGAACACGAGATTTATAAAGATGGCCACCGTTGAGAAGAAGTACCCATATGCG
CTCGACTCCGAGGGGAAAGCTAAATATGTGCCGGTATGGCGCTTCACGCAACCACACATG
ATGGCCTTCCACCTGTCCTGGATTTGCTTCTTCATGTCCTTCGTCGCTACATTTGCGCCT
GCCTCGCTCGCGCCCGTTATCCGTGATGACCTGTTCCTGACCAAGTCGGAGGTGGGCAAC
GCCGGCGTCTCCGCCGTGTGCGGTGCCATCGCGGCGCGTCTCTTCATGGGCATCTTCGTC
GACGTCGTAGGTCCCCGCTACGGCGCCGCTGCCGCCATGCTCATGACCGCACCCGCCGTC
TTCTGCATGGCCCTGGTCACCGACTTCTCCACCTTCGCCTGTGTGCGCTTCTTTATCGGT
CTCTCGCTCTGCATGTTCGTGTGCTGCCAGTTCTGGTGCGGTACCATGTTCAACGTGCAA
ATCGTCGGCACCGCCAACGCCATCGCCGCCGGCTGGGGCAACATGGGTGGCGGCGCTTGC
CACTTCATCATGCCGCTCATCTACCAGGGCATCAAGGACGGCGGCGTTCCCGGCTACCAG
GCCTGGCGTTGGGCTTTCTTCGTCCCCGGCGGCATCTACATTGTCACCGCCACCCTGACC
CTGCTCCTGGGCATTGACCACCCCAGCGGCAAGGACTACCGTGACCTGAAGAAGGAGGGC
ACGCTCAAGGCCAAGGGCAACATGTGGCCAGTCATCAAGTGCGGCCTCGGCAACTACAGG
TCTTGGATTCTGGCCCTGACCTACGGCTACTCCTTCGGCGTCGAGCTGACAGTTGATAAC
GTCATTGTAGAGTACCTCTTTGACCAGTTTGGCCTCAACCTTGCGGTGGCGGGCGCCCTC
GGCGCCATCTTCGGCCTTATGAACATCTTCTCTCGTGCTACCGGCGGCATGATCTCTGAT
TTGATTGCCAAGCCGTTCGGCATGCGCGGCCGGCTGTGGGTGCTGTGGATTACGCAAACG
CTCGGCGGCATCTTCTGCATTATCATGGGCAAGGTCAGCAACTCGCTAACGGCCACCATC
GTCATCATGATCATCTTCTCCATCTTCTGCCAGCAAGCATGCGGCATGCACTTCGGCATC
ACGCCCTTTGTTTCCCGTCGCGCCTACGGTGTCGTGTCTGGTCTGGTGGGTGCCGGCGGC
AACGTGGGAGCGGCCATCACGCAAGCGATCTGGTTTTCTGGCACCGCCACCTGGCAGATC
AACCTGTCCCGCCCAGATAGCTTTGTGTGGATGGGCGTGCAGGCTGTGGCGCTCACGGTG
GCCGTCATGTTCATCTGGTTCCCCATGTGGGGCTCCATGTTCACTGGGCCGCGCGAGGGC
GTGGAGGAGGAGGACTACTACCTGCGCGAGTGGAGCGCGGAGGAGGTGGCTCAGGGGCTG
CACCAGGGCTCGATGCGCTTCGCCATGGAGTCGAAGTCCCAGCGCGGCTACAAAGACAAG
CGAATGCTGGACGCCGTTGGTGAGACCGCCTCTGCTGACGTGGCCGCCGTGAAAGCAACC
GTGGCATAAACCGCGCAGTGCAAGCGTGCCTATAGTGGGTGTATGTGTAGAATACTTTTA
TCTGTGACACTGGTTTGTGCTGTATGCCGGTACACGCGGCTTTGGTGTTTGCTTGCGAGC
GTGTCAGTTGTCGTTTCCACACACGTGTGTGGCTTGTGTGGTGTGTATGGGCGGGGGGGG
CAGCGCCGTCTTGCACGTTACGGCATGGAGCTTGCGGAGCGAATGAGTAGCGCACATGAT
ATCACATAAGAGTTAGGGAGTAGCTAGGGTAAGAGAACACTGAACGTTCCGGATGTACGT
CGTATGAGAGTGCACGACAAGACAGTAGACCTTCGGAAGAGACAGCAGCAGAGACAGCGC
CCCACATTGCACGGTGGCATCTTTGCTCGTTGCCGCGGTGGGTGCGTAAGCGCGGCCGGT
AGGGCGGATATCTTATGTCATGACGATTGAGTTGGCGTGGTGTGACACGAGTACAAAGGG
TGCGTGCACATGTGCAAATTTATTATGACCTATACTAAAGTAATGATGTGTCTTTTGGGG
CAGCGCGGGGCGGAGGAGGATGCACGCAGGGAAATCCGTGATTCCATGAATGATGAAAAG
GCGCAGGCGGCGGCGCGGCGCGGCCATCAGCGGACGGCGTGTGGAGTGGATGGAGGCAAT
CAAGGCGTAGGTTACATTGCCGCTGTGGGTCCATCTGAATGTATTACTACCAAGTAATGT
GGCAGTTGCCAATCCAGGGTGCGGCATCCTCCTGTGCCAGTCCCGGCTCCTGCTGTAAAA
GCAATTTCAA