Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g404550.t1.2
CDS Infomation

pacid=30780522 polypeptide=Cre09.g404550.t1.2 locus=Cre09.g404550 ID=Cre09.g404550.t1.2.v5.5 annot-version=v5.6
Sequence

ATGACGCTCATTGAGATGCAAGACACGGCCCACACCTGTTTCTCTCGCCAGCCATTCAGT
GCCAGCCTGCTAGCCCTCGTCAAGCAGCACGCCGCATATGCGCGCGCCCGATCGCACGGC
AACTACCTGCCGGCTCTGAGGGCAGTCGCGCGCGAAGCTGCCACCATTGACACCAGCCGC
ACGCGCCTGTTCCTCGTCTTCCTCAGCGACGGCGCCCCCAGCGACCACACATCCACACGG
GGCATGACGCCCGTGGACGTCAGCAACGCGTGCATTCAGGCGGTGGAGCAGCTGGGGGCC
GCAGCGGGCGGGAGGGACCCTAGCACCATCAGCAGCTCGCTCTCATCGCTGCTCACCGAC
CTGGGCACTAGCGGAGGTGGAGGCAAGGGTGCCACGGTGCGGCCCGCCGTCGTGCCCACA
ACTGTCCGCCTGGATTACAACGAGAAGGTGTGGATTCGCGCAGTGGACGGCTGGGTGTTC
TACCCGCACACCGCCGTGGTGTCGCGCGTGCGCTACAATGCCGCCGGACAGCAGTTGACG
TTGGCTCAGGCAACAGCGCAGCGCGGCCTGGCGGTGCGGCGGCAGAAGTTCGGCGAGGGC
GCGGAGCGGGCCGTGTTCCAGGCGACAGTTGTGGTCGTCAGCGGGTCGTCTGCGTACACG
GTTGGGCCGCGGCTGGTGGCCAAACAGCCGCGGTTCCTGGAGCAGCTGACCGGCGCCATG
CGCTTCCAGCAGGAGACCTTCTGCCGCGTCCAGGCGGAGGCAGAGGCCCTGGCCCAGAAG
TTCAACCGGCAGCCGGCGGTGCGGGAGGCGGCCTGGCAGCAGGTGGCCTTCCTGCAAGTC
GTGGTGTGGCGGGTGCTGGACACGGAGGGCGTGCGGGGCACCGGCAGCCGCGTGGTGGAC
ATGCTGGTGGAGGAGCTGGAGGGGCAGCTGATCAAGTGGAACAACAACAACGGCGGGGTC
GCGCGCAGCATGGGCGGCATCACGGAGGGCGGCGGCGGCAGCCGCGCAGCGCCGGACCCG
GCCATGGTGGTGATTGCGGACGACGACGGGGAGGAGTACGAGGAGGAGGGATACGAGCAT
TACGGAGATGATGGCGCGGAGGTGCGGCCGGAGCACGTGCCACAGGCCTTCTCGCACTTC
ACGTGGCAGGCCACGGGCGGAACTAAGCCCGTGTACAATTTGCAGGGCACGTGGACCGAG
GCCGACGGCTTCACGCTGACCGACCCCGTCATCCACCACGCGCGCGGCCACAAGCTGAAC
GGCGCCACGGATGAGGGCCTGGAGGGCGTGCGCAGCTTCTTCCGCACCCACACCTGCAAC
GCGCTGTGCAGGCGGCTGGGCCTGCGTGCAGCGATCGTATGA

Peptide Sequence

PEP ID

Cre09.g404550.t1.2
PEP Infomation

pacid=30780522 transcript=Cre09.g404550.t1.2 locus=Cre09.g404550 ID=Cre09.g404550.t1.2.v5.5 annot-version=v5.6
Sequence

MTLIEMQDTAHTCFSRQPFSASLLALVKQHAAYARARSHGNYLPALRAVAREAATIDTSR
TRLFLVFLSDGAPSDHTSTRGMTPVDVSNACIQAVEQLGAAAGGRDPSTISSSLSSLLTD
LGTSGGGGKGATVRPAVVPTTVRLDYNEKVWIRAVDGWVFYPHTAVVSRVRYNAAGQQLT
LAQATAQRGLAVRRQKFGEGAERAVFQATVVVVSGSSAYTVGPRLVAKQPRFLEQLTGAM
RFQQETFCRVQAEAEALAQKFNRQPAVREAAWQQVAFLQVVVWRVLDTEGVRGTGSRVVD
MLVEELEGQLIKWNNNNGGVARSMGGITEGGGGSRAAPDPAMVVIADDDGEEYEEEGYEH
YGDDGAEVRPEHVPQAFSHFTWQATGGTKPVYNLQGTWTEADGFTLTDPVIHHARGHKLN
GATDEGLEGVRSFFRTHTCNALCRRLGLRAAIV*

Transcript Sequence

Transcript ID

Cre09.g404550.t1.2
Transcript Infomation

pacid=30780522 locus=Cre09.g404550 annot-version=v5.6
Sequence

CTTACACGCGCACCATCTTCTGTCACGATACCCCGTGGCCCTGTGCCGTGAAACCCGGCG
CCACGCAGATGACGCTCATTGAGATGCAAGACACGGCCCACACCTGTTTCTCTCGCCAGC
CATTCAGTGCCAGCCTGCTAGCCCTCGTCAAGCAGCACGCCGCATATGCGCGCGCCCGAT
CGCACGGCAACTACCTGCCGGCTCTGAGGGCAGTCGCGCGCGAAGCTGCCACCATTGACA
CCAGCCGCACGCGCCTGTTCCTCGTCTTCCTCAGCGACGGCGCCCCCAGCGACCACACAT
CCACACGGGGCATGACGCCCGTGGACGTCAGCAACGCGTGCATTCAGGCGGTGGAGCAGC
TGGGGGCCGCAGCGGGCGGGAGGGACCCTAGCACCATCAGCAGCTCGCTCTCATCGCTGC
TCACCGACCTGGGCACTAGCGGAGGTGGAGGCAAGGGTGCCACGGTGCGGCCCGCCGTCG
TGCCCACAACTGTCCGCCTGGATTACAACGAGAAGGTGTGGATTCGCGCAGTGGACGGCT
GGGTGTTCTACCCGCACACCGCCGTGGTGTCGCGCGTGCGCTACAATGCCGCCGGACAGC
AGTTGACGTTGGCTCAGGCAACAGCGCAGCGCGGCCTGGCGGTGCGGCGGCAGAAGTTCG
GCGAGGGCGCGGAGCGGGCCGTGTTCCAGGCGACAGTTGTGGTCGTCAGCGGGTCGTCTG
CGTACACGGTTGGGCCGCGGCTGGTGGCCAAACAGCCGCGGTTCCTGGAGCAGCTGACCG
GCGCCATGCGCTTCCAGCAGGAGACCTTCTGCCGCGTCCAGGCGGAGGCAGAGGCCCTGG
CCCAGAAGTTCAACCGGCAGCCGGCGGTGCGGGAGGCGGCCTGGCAGCAGGTGGCCTTCC
TGCAAGTCGTGGTGTGGCGGGTGCTGGACACGGAGGGCGTGCGGGGCACCGGCAGCCGCG
TGGTGGACATGCTGGTGGAGGAGCTGGAGGGGCAGCTGATCAAGTGGAACAACAACAACG
GCGGGGTCGCGCGCAGCATGGGCGGCATCACGGAGGGCGGCGGCGGCAGCCGCGCAGCGC
CGGACCCGGCCATGGTGGTGATTGCGGACGACGACGGGGAGGAGTACGAGGAGGAGGGAT
ACGAGCATTACGGAGATGATGGCGCGGAGGTGCGGCCGGAGCACGTGCCACAGGCCTTCT
CGCACTTCACGTGGCAGGCCACGGGCGGAACTAAGCCCGTGTACAATTTGCAGGGCACGT
GGACCGAGGCCGACGGCTTCACGCTGACCGACCCCGTCATCCACCACGCGCGCGGCCACA
AGCTGAACGGCGCCACGGATGAGGGCCTGGAGGGCGTGCGCAGCTTCTTCCGCACCCACA
CCTGCAACGCGCTGTGCAGGCGGCTGGGCCTGCGTGCAGCGATCGTATGAATACTGCTGA
TTGTCATTGGGTGCGAGGCGGGAAGGGGTTGCGGGACGTGCTGGTGGGGTTCACCTGCAG
GAGGGGCCGTCCATGTATGGGCCCATGCCGTGGCTAGATAAGGTGGATGTGTACGCCGAA
GCCGTGCACATGGAACAAGCACCATACTCTGAGACGGGACGGTGGGGTAAGGCGCGTGGG
GTGGCCCTGCACCACCGAGAGGAGGCAGGCGATGTGTGCGTTCACGTCCCTGCGTACCTG
TGCCTACTAGCAGCCACCTCGACTCCCGTGCAAAGATGGCCAGCATGTCCGCCTTCATGT
ACCAGCGAAGATACGTGCTAGGAGAGGCGTTTTGATTTTACCTGGTGTGTAAGAGTCGTA
GGCGAGCAGATGGCGCTACGGTGCCTTGTTGCGGGACGCGGGCGGACCGCAAGTGGGGCT
CCAACAACTAGCACTGCGGGGTAACTGGCTCGGGATCTGTTGAGAATACTTTGGATGGAC
TGTGGGCGTGTGGCGTGAAGGTATTGAGGGCGGATGAGGCGGATTAGTTCCGGGGAATTG
GGGCAGCTTGCAAAGGCGTGGGGCAGGTGACAAGGGCACCCCTCCTGGCTGCGACGGGCA
ACACGCACCCAATCGTTGCACGAATCCGTGGCATTGCGAGGCGTTTGTTCCTGACCGTCG
CAAATTTCACCTAGAAGTTATGCA