Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g403900.t1.2
CDS Infomation

pacid=30780724 polypeptide=Cre09.g403900.t1.2 locus=Cre09.g403900 ID=Cre09.g403900.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCGACCGATTGGGGCCTCCGTGCGTTCATCTTCGGTCTTGAAGATCTGGAAGATGAT
GAGAAAGAGCTATGCTTCAACATTCTGGACCGGAAAGGCTTCTCGGCCGCTAAGAAGCGC
CGAGCGTTCTTCGCACTCAACGACGCTGACCTGCAGACCGCAGGCATCAGTGAGCTGAGC
ACGCGCAAGGCTCTGCGGCTGGCAATTGAGGCCTCGGCGGCTGGCCTGGGCGTGGGGAGC
GCGGCGGGAGCCGGCTCGCTGCCGGCTGCTGCTGTTGTTCTCGAGCGGTTGGAGCAGCTC
CAGCAGAACCTTGGGAACGTATTGAGCCAGCAGCAGGAGATCCGACAGGAAATCAGGGAC
CAGGGCCAGTTCGTACGAGTCCTGATGGAGGGCGAGTTCACACCGACATCCAGCAAGGAC
ACCACGCCCTACCGCGAGAATGCCTTCGAGTACTATGGCTACAGCGCCAGCCCCAAGACC
GTGCAGTGCATGGTGACCGGAGAGCACATGCCAGCCGCCAGTATCAAGGCTGGGCATATC
TACCGTCAGAGCTGGAAGCGGACTTTCCTGCCGCTGCTGGGCGTCACCTCCGTGCACGAC
CCGCGGAACATCATCCTGGTACGCACGGAAGTAGAGACCGCTTTCGACCGGTTTCAACTG
GCCATCATTCCCCAGAACGAGAACGGCGTTGAGTGCTATCAGATCTACGTGCTGAAGGAG
TCGTTGCTGCAGAACGCGCGGGAACAGTTCATTGGAACGGGTGACGCCGCCAAGTCGGAT
ACCAAAAAGTGGAAGGACGTGCACAAAACGTACCTGCACGTGGCGGGCGACAACCTGCCC
GCCCGCCGCCTGCTGGCATTCCACGCACACCACGCAATCAATAACGCTGTCCGCGCCGGC
TGGCTGAAGCCTGGCGAAGTCACAGTGTCGCAGGCGGGCTGGGCCTCGCCTGGGTATGAC
CGCGAGTTGATGCGCACGTTTCTGGAAGGAGCTGTGGCATCAGCAGGCCTGCTTGCAGCA
GCCAGCGAGGACAACCAGTCGCAGTAG

Peptide Sequence

PEP ID

Cre09.g403900.t1.2
PEP Infomation

pacid=30780724 transcript=Cre09.g403900.t1.2 locus=Cre09.g403900 ID=Cre09.g403900.t1.2.v5.5 annot-version=v5.6
Sequence

MSTDWGLRAFIFGLEDLEDDEKELCFNILDRKGFSAAKKRRAFFALNDADLQTAGISELS
TRKALRLAIEASAAGLGVGSAAGAGSLPAAAVVLERLEQLQQNLGNVLSQQQEIRQEIRD
QGQFVRVLMEGEFTPTSSKDTTPYRENAFEYYGYSASPKTVQCMVTGEHMPAASIKAGHI
YRQSWKRTFLPLLGVTSVHDPRNIILVRTEVETAFDRFQLAIIPQNENGVECYQIYVLKE
SLLQNAREQFIGTGDAAKSDTKKWKDVHKTYLHVAGDNLPARRLLAFHAHHAINNAVRAG
WLKPGEVTVSQAGWASPGYDRELMRTFLEGAVASAGLLAAASEDNQSQ*

Transcript Sequence

Transcript ID

Cre09.g403900.t1.2
Transcript Infomation

pacid=30780724 locus=Cre09.g403900 annot-version=v5.6
Sequence

CAGACTCCAAAAGTCTCATCTTTCCCACGCATTTGCAAACACTGACTGCGGCATAGACAA
CGTTCCAAAGAGGCGGCCAATTCTCATGTCGACCGATTGGGGCCTCCGTGCGTTCATCTT
CGGTCTTGAAGATCTGGAAGATGATGAGAAAGAGCTATGCTTCAACATTCTGGACCGGAA
AGGCTTCTCGGCCGCTAAGAAGCGCCGAGCGTTCTTCGCACTCAACGACGCTGACCTGCA
GACCGCAGGCATCAGTGAGCTGAGCACGCGCAAGGCTCTGCGGCTGGCAATTGAGGcctc
ggcggctggcctgggcgtggggagcgcggcgggagccgGCTCGCTGCCGGCTGCTGCTGT
TGTTCTCGAGCGGTTGGAGCAGCTCCAGCAGAACCTTGGGAACGTATTGAGCCAGCAGCA
GGAGATCCGACAGGAAATCAGGGACCAGGGCCAGTTCGTACGAGTCCTGATGGAGGGCGA
GTTCACACCGACATCCAGCAAGGACACCACGCCCTACCGCGAGAATGCCTTCGAGTACTA
TGGCTACAGCGCCAGCCCCAAGACCGTGCAGTGCATGGTGACCGGAGAGCACATGCCAGC
CGCCAGTATCAAGGCTGGGCATATCTACCGTCAGAGCTGGAAGCGGACTTTCCTGCCGCT
GCTGGGCGTCACCTCCGTGCACGACCCGCGGAACATCATCCTGGTACGCACGGAAGTAGA
GACCGCTTTCGACCGGTTTCAACTGGCCATCATTCCCCAGAACGAGAACGGCGTTGAGTG
CTATCAGATCTACGTGCTGAAGGAGTCGTTGCTGCAGAACGCGCGGGAACAGTTCATTGG
AACGGGTGACGCCGCCAAGTCGGATACCAAAAAGTGGAAGGACGTGCACAAAACGTACCT
GCACGTGGCGGGCGACAACCTGCCCGCCCGCCGCCTGCTGGCATTCCACGCACACCACGC
AATCAATAACGCTGTCCGCGCCGGCTGGCTGAAGCCTGGCGAAGTCACAGTGTCGCAGGC
GGGCTGGGCCTCGCCTGGGTATGACCGCGAGTTGATGCGCACGTTTCTGGAAGGAGCTGT
GGCATCAGCAGGCCTGCTTGCAGCAGCCAGCGAGGACAACCAGTCGCAGTAGGGTGCTGC
GAGCCCGCCGCTGAGGTGGGGCAAGTGGGCGGGTCGTCTAGTTTCCGAGCAAATGGCCTG
GCGGTGCTCTTTGCGGGTCGGTGTAGAGAGCAGAGAGAAGGGACGTGGAAGAGGCGTGGG
GGCCTGTATTTCTGAGTGCATCTGAGTGATGCAGCGACCGCGTTGCGGGGCCATGCGAGC
TGACTCAGCACATGCGTTGTGTCGTCACCCCGGAGCTTTTGGTGCATGGACATGCGAGCA
CTGTCACGACATGTTGTGTGTGGCTATCATGGGATAAGGGAGGGACAAATGCACGTGCAT
CTTTGTGTGTGGGGGGGGCCTACTATGACGTCTTTAGGTATGATTTGGAACTTGCCGGGA
TGCCTGAGTTCGCCTTTTCTGATTTGTGGAGCGCAAGGATGCTACTTGTACTGCGGGCGT
TTGGGTATAAATGGACTCCGAAAGGCGATCAGCTGATTCGGGTGAGTGATATTCTGGATT
CTTTTTGGGCTCAGCCCCCACAGCGCAGCGGCATTTTGAAAGCCACATGGAAGGGCGGGT
CGAGTGGGAGCACCAGTCTGGCGGGTCTTGACGAAATAGTGCACCTTCCACGGTATAGAT
tgcattggttacaagagggacttgctgacgcgagtcacgagcgacatctgctctggacct
cagggacgtgccacctgcaacgccgacgacctactctagtagtaggcgtgctctcgtgag
agctccatttacctccggttctgctcctaacatcgagtgctaggaccctgctcaatcacc
cgaccaatcagaactactcgattttttggagtccgcagcaaaccttccggactgaatcca
tccaaatcaactaagtctaaactcgtccagcccactgcatgtccgtagtctattcattcc
gatcgaaatcggaggggtgtatgggagtcgaacccatgacctcgagcgaattcgtccctt
gacgctatccacTCGAAGTGGAACCGGCCACCCCGGTATAGCTGTCACAACACCACGTGT
GACCTGTCATGGCGTGTCACCAGTGGGCCTGTCATGCCGTGTGCATGGAGGTCTGTTGTA
CGGTGCGTTTTGGAGTTGTACGGTGCGTTTTGGAGTTATTAGGCGTGAGAGTAGCGAGGA
GGGCTGTCTCTTAGCCTGGTCCTTGGCGTGATAGCCATTGACCAGCATGTAACACGATTA
CGCG