Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g401022.t1.2
CDS Infomation

pacid=30780383 polypeptide=Cre09.g401022.t1.2 locus=Cre09.g401022 ID=Cre09.g401022.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTTCGCACTCATAGCGAGCTTCTTCGTGTGGTACTACAACTTCTCGCAGCCGGCTCAG
CGCCTGCTGCCCGACATCAACCCGCGGGCAGTGCTGCAGCCGGAGCCGGGGAGGCTGCAC
ATAGTGGTCACCGGCGGCGCGGGCTTCATCGGCTCCCATGCCGCCATGGTCCTGATGCAG
GCGGGCCACGCCGTGACGGTGCTGGACAACCTCTCGCGGGGCAACGCTGGAGCGCTGAGG
GCGCTGAGGGACATGGCTCCGGCCCGGCGCTTCCGCTTCCTGCGGCTGGACCTGGGCGAG
CGCGGCGCACTGTGCGGCGCACTGCAGCGCGCGGCGCCGCGGCCCGACCTGGTCATGCAC
TTCGCGGCGGTGGCGTACGTGGGCGAGTCCATGCGCGACCCGCTGCAGTACTACAAGAAC
GTGACGGTCAACACAGTCAACGTGCTGGACTGCATGGCGGCGGCGGGGATAAAGCAGCTG
GTGTACTCGAGCACGTGCGCCGTGTACGGCAACCCGGAGTCCCTCCCCGTGACCGAGGCC
ACCCCGCCCAAGCCCATCAACCCCTACGGCCAGTCCAAGCTCATGGCGGAGGAGGTGATC
CGCTGGTACGCCCGCTCCCAGCCCGACTTCAAATCCATCATCCTGCGCTACTTCAATGTG
TACGGCAGCGACCCGCAGGGGAGGCTAGGCGAGTACCCGCGGCCGGAGCTGCGCGCCCAG
GCCCGCATCAGCGGCGCCTGCATGGATGCGGCGCTGGGGCTGGTGCCCAGCCTCACCGTC
AAGGGCACCAAGCACCCCACCAAGGACGGCACCTGCGTGCGCGACTACATCCACGTGATG
GACCTCATCGCCGCTCACGTGGCGGCCATGGCCCACCCGGCCAACCCGCCGCCGCTGTAC
AACATCGGCACGGGGCGCGGCGTGAGCGTCAAGGAGTTCGTGGACGCGTGCAAGAAGGTC
ACAGGCAGGGACATACAGGTGGTGTACCAGGAGGAGGCGCGGCCCGGCGACTACGCCGAG
GTGTGGAGTGACGTGGCCAAGATCAACAACGAGCTGGGCTGGAGGGCGAACTATACAAAC
ATAGAGGAGGGGCTGCGACACGCCTGGAACTGGAGGCTGGAGCACCCAGACGGATATTGA

Peptide Sequence

PEP ID

Cre09.g401022.t1.2
PEP Infomation

pacid=30780383 transcript=Cre09.g401022.t1.2 locus=Cre09.g401022 ID=Cre09.g401022.t1.2.v5.5 annot-version=v5.6
Sequence

MFALIASFFVWYYNFSQPAQRLLPDINPRAVLQPEPGRLHIVVTGGAGFIGSHAAMVLMQ
AGHAVTVLDNLSRGNAGALRALRDMAPARRFRFLRLDLGERGALCGALQRAAPRPDLVMH
FAAVAYVGESMRDPLQYYKNVTVNTVNVLDCMAAAGIKQLVYSSTCAVYGNPESLPVTEA
TPPKPINPYGQSKLMAEEVIRWYARSQPDFKSIILRYFNVYGSDPQGRLGEYPRPELRAQ
ARISGACMDAALGLVPSLTVKGTKHPTKDGTCVRDYIHVMDLIAAHVAAMAHPANPPPLY
NIGTGRGVSVKEFVDACKKVTGRDIQVVYQEEARPGDYAEVWSDVAKINNELGWRANYTN
IEEGLRHAWNWRLEHPDGY*

Transcript Sequence

Transcript ID

Cre09.g401022.t1.2
Transcript Infomation

pacid=30780383 locus=Cre09.g401022 annot-version=v5.6
Sequence

TTTGCTCATATCACAACACATACCCCGCTGCTATCAAACGCGGCGTGCAAGCAATGTCTA
CACGAGCAAACTCTGTCCAGCAACAGTTTTACATGACTGCATTCACTATGCTCTGCTAAG
TCATTTGATACTTTTCTCTCACGAAAGCAAGCAGCTTTCATTATCCAAACTGTTGCAAGT
AATGCCACCCACGATGGCGGGAGCGGACCGCTGGAAACGCGATCCCATTAGATTCCTAAT
GTTCGCACTCATAGCGAGCTTCTTCGTGTGGTACTACAACTTCTCGCAGCCGGCTCAGCG
CCTGCTGCCCGACATCAACCCGCGGGCAGTGCTGCAGCCGGAGCCGGGGAGGCTGCACAT
AGTGGTCACCGGCGGCGCGGGCTTCATCGGCTCCCATGCCGCCATGGTCCTGATGCAGGC
GGGCCACGCCGTGACGGTGCTGGACAACCTCTCGCGGGGCAACGCTGGAGCGCTGAGGGC
GCTGAGGGACATGGCTCCGGCCCGGCGCTTCCGCTTCCTGCGGCTGGACCTGGGCGAGCG
CGGCGCACTGTGCGGCGCACTGCAGCGCGCGGCGCCGCGGCCCGACCTGGTCATGCACTT
CGCGGCGGTGGCGTACGTGGGCGAGTCCATGCGCGACCCGCTGCAGTACTACAAGAACGT
GACGGTCAACACAGTCAACGTGCTGGACTGCATGGCGGCGGCGGGGATAAAGCAgCTGGT
GTACTCGAGCACGTGCGCCGTGTACGGCAACCCGGAGTCCCTCCCCGTGACCGAGGCCAC
CCCGCCCAAGCCCATCAACCCCTACGGCCAGTCCAAGCTCATGGCGGAGGAGGTGATCCG
CTGGTACGCCCGCTCCCAGCCCGACTTCAAATCCATCATCCTGCGCTACTTCAATGTGTA
CGGCAGCGACCCGCAGGGGAGGCTAGGCGAGTACCCGCGGCCGGAGCTGCGCGCCCAGGC
CCGCATCAGCGGCGCCTGCATGGATGCGGCGCTGGGGCTGGTGCCCAGCCTCACCGTCAA
GGGCACCAAGCACCCCACCAAGGACGGCACCTGCGTGCGCGACTACATCCACGTGATGGA
CCTCATCGCCGCTCACGTGGCGGCCATGGCCCACCCGGCCAACCCGCCGCCGCTGTACAA
CATCGGCACGGGGCGCGGCGTGAGCGTCAAGGAGTTCGTGGACGCGTGCAAGAAGGTCAC
AGGCAGGGACATACAGGTGGTGTACCAGGAGGAGGCGCGGCCCGGCGACTACGCCGAGGT
GTGGAGTGACGTGGCCAAGATCAACAACGAGCTGGGCTGGAGGGCGAACTATACAAACAT
AGAGGAGGGGCTGCGACACGCCTGGAACTGGAGGCTGGAGCACCCAGACGGATATTGATA
ACATCAAGTGAGGAGAGCATTCTAAGCATTCAAAAGGTGAGGCCTGACGCCTGCCTGCCA
GAGCCTGCACGGGCGAACGATTGTGTATGGCTGGCGACGAGGGGCGACGCAAGCATGGAT
GATGAGTGGTGACGTACCGCCGGGGCGCGCGGGGCTATGTATGTATGGACTCTTATCGGC
GATATGGCATATGCGGGTGGTGTGCGGCTGTGCGCGTTGTGGTGTTACGTATACGCGAAC
CAGCTTTTGCATTGGCGGGACTCGCGCGGGAGGCCCTGGGAGGCCCTGGGCAACCCGGTT
GCGGGGTTTCGGCGGCGTGCCAGAAACGCATGAAGATCTCACCAATGCTTGGCTCTCCGG
CTCGGGTCTCATGTGAGGGCTCTATGCAAACTTAATTGCTTGAATCACCAGGAGCGGCTG
GGGCAGTGGGCGCGTCGCGGTTACCTCGCGTCGCGAAGGACTCATCACGCAGCGGCAGAT
GTTTCCAGTCAACCGAAGTGCCCAATCAAGGTCATACAGGGTAATAAGTAGTTAATGTGA
GCCCTGCGCACTGGAAGTGAAGATTTTATAACAGTGAAGACCCTCGCTTGCAGCTCATGT
CTCAAGCGCCT