Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g398700.t1.2
CDS Infomation

pacid=30780192 polypeptide=Cre09.g398700.t1.2 locus=Cre09.g398700 ID=Cre09.g398700.t1.2.v5.5 annot-version=v5.6
Sequence

ATGATATACGCTCTATTACGGCTTATCCGCGAAACTCTAGGCCTCGGAAAGTTGTATAAC
GCTCTGGTGAAAACTTTCATCGGCGCTGTGGAGAATGGATACGTGCCGGACTTCATCCTG
CGCACGGGAATTCGTTTCCTGCTTTCAAACCGAGTCGCCGAGGTGCCCAAGGACCTGAAC
GGGCAGCTGCAGCAGACGGTGGCGTTCGTGAACGACCTCAAGACAATGCCCATCGCGGTC
AACACCTCGGAGGCCAATGAGCAGCACTACGAGATCCCCACGCCCTACTATCTGCTGGTC
CTGGGCTCGCACCTCAAGTACTCCTCCTGCCTCTACCGCTCGCCGCGGGAGTCGCTGGAG
CAGGCCGAGTACAACATGCTGGACCTGTACTGCGAGCGCGCGCAGCTGCGGCCCGGCCAG
CGGGTTCTGGAGCTGGGCTGCGGCTGGGGCAGCTTCAGCCTGTTTGCGGCGGCGCGCTAC
CCCGCCTCCACCTTCTTCGCCGTCTCCAACAGCGCCACACAGAAGGCGTTCATTGACGGA
GAGGCCGCCAAGCGCGGCATCACCAACCTCACGGTCCTGACCGCCAACATGGTGGACTTC
GAGGCGCCCACCGCCAACGGCCTGTTCGACCGCGTGGTGTCCATTGAGATGTTCGAGCAC
ATGAAGAACTACCAGCGGCTGCTGCGCAAGGTGTCGGGCTGGCTGGCCGCCGAGGGCAAG
TTGTTCGTGCACATCTTCCTGCACCGCACCACACCCTACCACTTCGAGGTGCAGAGCGAG
GAGGACTGGATGTCCAAGTACTTCTTCACGGGCGGCACCATGCCCTCCTCCGACCTGCTG
CTCTACTTCCAAGACGACCTGGTCATTCGCAACCACTGGTACGTGAACGGGCGGCACTAC
AGCCGCACTCTGGAGGACTGGCTGGTGCGCCACGACAGGAACAGCCGCGAGGTGCGCAAG
ATCTTGACCACCGCCTACACGGGCTCCAAGGACAGCGCCAACGTGTGGTTCCACCGCTGG
CGCATCTTCTACATCGCCTGCAGCGAGCTGTTCAACTACAAGGGCGGCGAGGAATGGGGC
GTGGGCCACTTCCTGTTCGAGCAGCGCGGCTGA

Peptide Sequence

PEP ID

Cre09.g398700.t1.2
PEP Infomation

pacid=30780192 transcript=Cre09.g398700.t1.2 locus=Cre09.g398700 ID=Cre09.g398700.t1.2.v5.5 annot-version=v5.6
Sequence

MIYALLRLIRETLGLGKLYNALVKTFIGAVENGYVPDFILRTGIRFLLSNRVAEVPKDLN
GQLQQTVAFVNDLKTMPIAVNTSEANEQHYEIPTPYYLLVLGSHLKYSSCLYRSPRESLE
QAEYNMLDLYCERAQLRPGQRVLELGCGWGSFSLFAAARYPASTFFAVSNSATQKAFIDG
EAAKRGITNLTVLTANMVDFEAPTANGLFDRVVSIEMFEHMKNYQRLLRKVSGWLAAEGK
LFVHIFLHRTTPYHFEVQSEEDWMSKYFFTGGTMPSSDLLLYFQDDLVIRNHWYVNGRHY
SRTLEDWLVRHDRNSREVRKILTTAYTGSKDSANVWFHRWRIFYIACSELFNYKGGEEWG
VGHFLFEQRG*

Transcript Sequence

Transcript ID

Cre09.g398700.t1.2
Transcript Infomation

pacid=30780192 locus=Cre09.g398700 annot-version=v5.6
Sequence

ATGTTCGCATGAGCGAGACTCCTCGGCATTATATACCTTTGTTAGAGATCTCCGCGTCTA
TTTCCTTCCATAGATGATCAACGTTTGATTCTTCGCTGCTCTTCTGCAAGACGAGGGCTC
TATATACAATTGCGTTGCAGCCATGATATACGCTCTATTACGGCTTATCCGCGAAACTCT
AGGCCTCGGAAAGTTGTATAACGCTCTGGTGAAAACTTTCATCGGCGCTGTGGAGAATGG
ATACGTGCCGGACTTCATCCTGCGCACGGGAATTCGTTTCCTGCTTTCAAACCGAGTCGC
CGAGGTGCCCAAGGACCTGAACGGGCAGCTGCAGCAGACGGTGGCGTTCGTGAACGACCT
CAAGACAATGCCCATCGCGGTCAACACCTCGGAGGCCAATGAGCAGCACTACGAGATCCC
CACGCCCTACTATCTGCTGGTCCTGGGCTCGCACCTCAAGTACTCCTCCTGCCTCTACCG
CTCGCCGCGGGAGTCGCTGGAGCAGGCCGAGTACAACATGCTGGACCTGTACTGCGAGCG
CGCGCAGCTGCGGCCCGGCCAGCGGGTTCTGGAGCTGGGCTGCGGCTGGGGCAGCTTCAG
CCTGTTTGCGGCGGCGCGCTACCCCGCCTCCACCTTCTTCGCCGTCTCCAACAGCGCCAC
ACAGAAGGCGTTCATTGACGGAGAGGCCGCCAAGCGCGGCATCACCAACCTCACgGTCCT
GACCGCCAACATGGTGGACTTCGAGGCGCCCACCGCCAACGGCCTGTTCGACCGCGTGGT
GTCCATTGAGATGTTCGAGCACATGAAGAACTACCAGCGGCTGCTGCGCAAGGTGTCGGG
CTGGCTGGCCGCCGAGGGCAAGTTGTTCGTGCACATCTTCCTGCACCGCACCACACCCTA
CCACTTCGAGGTGCAGAGCGAGGAGGACTGGATGTCCAAGTACTTCTTCACGGGCGGCAC
CATGCCCTCCTCCGACCTGCTGCTCTACTTCCAAGACGACCTGGTCATTCGCAACCACTG
GTACGTGAACGGGCGGCACTACAGCCGCACTCTGGAGGACTGGCTGGTGCGCCACGACAG
GAACAGCCGCGAGGTGCGCAAGATCTTGACCACCGCCTACACGGGCTCCAAGGACAGCGC
CAACGTGTGGTTCCACCGCTGGCGCATCTTCTACATCGCCTGCAGCGAGCTGTTCAACTA
CAAGGGCGGCGAGGAATGGGGCGTGGGCCACTTCCTGTTCGAGCAGCGCGGCTgaggagc
ggtacgagcaggagcaggaggaacggggaagatgaggggcgagcggaaggagcgagcgga
gaaggggagggggagggatggcaggggaggccagaagtgggcggcagaagggtagggtgg
aggcggGTGTCTGTATGTGTATGTGTGTGTCAGTGGTGACGCGCATGCCGTGACTCAATC
GAACATACCGTGTACATGGGTggccgggggcgcggcggggcggggcTGCAAGGCATGTAC
GGGAAGGGACGTGCAGCTGCACGGCCGCTGCACGGCGGCTGCACGGCTGGGTGTTTGAGA
GACAACGCATCCCCACAGTCGGGTCCATAGCAAGCGGCATGGCGAACATGGGTCAAGCAT
TGGTTGGCGGTGTTTCGAGTATATACCAGCGGAGAAGTAAGGCACCTGGTATGGCATGTA
TGCGTGCTGCTGCTGTATGGCCTGGGGCGCACTTGTTGAACACTGGGGGCCAGCGGCGGT
GGGGGTGCCCTGCGCTGTAAGGGAGGCTGACCCGCAAAGCCATGCCGCCCGGCCGCATCA
TCCAGagattgtgttggtgcacgagggacctgctgacgcagctcacgaggcagcgaacac
gcaatagc