Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g397364.t1.1
CDS Infomation

pacid=30780269 polypeptide=Cre09.g397364.t1.1 locus=Cre09.g397364 ID=Cre09.g397364.t1.1.v5.5 annot-version=v5.6
Sequence

ATGGCTGAAGCGCCCGCCAAGCGCCACTGCAGCGCACCAACCGGCGTGTCGCTGCTTTGG
CGTGCCAAAGAGCTGGGCCAGCTGCAAGCTGGGGCGCTGGTGTTCGCGGCATGGGTGGCG
CGGAGTAAGAGCCGCTTCCCGGAGGTGGTGTACTACTGCAGCAGCGACGTGTCGGAGGAG
CAGCTTGGGCGGGCCGACCACGAGCAGCTTCTGGGAGCGCTGCAGAGTCTTACCTCGCAG
CATCTGCTGGGTCAGCTCTGCGGCCTGGCTCCGGAGCAGGTTGCGGTGACCAGGCTTGAG
GAGTACGACACGTCAGCCACCAGCAGCAGCGCCGCGCCCACCCAGCCTGCAGACGTCAAG
CGCAGCCACAAGGAGCGCCTACAGCGGCTGCTGGAAAGCGCAGGGCAGTGCTCGGATGGG
CCCTTCCTGGCTTACGTACTTACAGCCGGCCACAAGGTTGTCGTGAAGCAGCTTGTTGGC
GGCGGCCTGGCGCGCGCCACCTTCTGCAGTGAGGAGTGGGGCGCGGCATTCGAAGACAAG
ATGTACATCGCGCGCACAACATGGCCGCCGGGGGCCATGAGCATGGAGCTGCCGGCGGGG
CACCTGGGCTGGTACGCGGCGTTCCTTGCGTACGGCCGCGGCGCATACGTCCTGCACCCA
ACCGCTGAGTCGTGGCTGCTGCCTGACGCGGTGGCAGAGGAGCAGCCTGAGAGTACCGGG
CACGTGTGGCGCATCTCGTCCGCGCCTGTCGCCGTGCAGTTGGAGCAGCGGCTTGGGCAG
CCGCCCCGCATGACCTGCACCTGCAGCAGCTTCAGGGTCGTGGGCGCCGCCGTGAGCAGG
TGCCTGCACACCGCCTACGTCAGCAGTGTGGAATGGCTGCTGGAGGCGGGGCCGCCGCCG
CCTCGGCTGGTCCCAGCCGCACGGTGCGCGCGGTCGGACGATGGGCGGGTGCTGCCGGGC
GACTACATCTGGCTGCCGGGGCGGACGCTGGTGGCGTGTACACGGCAGACAGGGGCGCTT
CGCTGCTGCCACAGCGGCTGCGGCGCTGCCTGCCAGCATGTCACGGAGGCACGGGCAGCG
TTCGAGCCGCACCTGCTGCCTGCAGTAGCAGTGGCGGCGGCGCCGGCGGCGGCATCTTCT
GGGCAAATCAGGACACCAGCGGGCGCGGAGGGCGACGCAGATGACACCCAGACACAGCAG
GCTGGAGCGCCAGCGCCAGCAGCAGCAGCAGCAGTAGCGGACGAGGCGGTTGAGGAGGCA
GTGCCGCCGCCGTCGGAAGTGCGGTACCCATACCCGCCTGACAAGGCAACCATCATCGCC
ATGATGACGTTTGAGCTGTCACTGATGCAGCTGCAGGGCGAGCGGCTAGCAGCGGCGGGG
GGTGGCGGCGGAAGCGGTGGTGCCAATGGCAGCAGCGGCGGCGGCGCGGTCTTGAAGCTA
GCCCCGCCGCTGCCGCCAAGCGGCTGCTGTGCCTGTGGCCAGCCCTACACGGAGCGCAGG
GTCGCAACCGTTACCACTGTGTACGGCCCAGATACTGTCGGCCCCGTGCGCGCGCACCTG
TTCGAGCTGTACTCCGGCTGCTCCTGCCTGGCGTGCGTGATGGCGTATGACGGCGTCGCA
GACGGGCTCTTTCGCTACAGCAGGAGCTCCTTCTTCTGCCTCCGCCACATGTACACATAT
GCGGACCAGCTCCTCGGCAGCGGCATGAACGTGGAGGCGTACGTCAGCTCACAGCGGCGC
CTGGCAGCAACGACGCTGCTTGCGGACGCGCAGCGGCCGAAGCAGTTCTCTGCGACGCTG
TTCCGGCGCACATGGCAGCAGTTTGAGGCGCGGCTCGACCGCTTTCACACTTTCAAATGC
CCCATCTGCGACTGGCGGCCTCGTGTGCTGATCTGCGATGCCACGGCTATCACGTTCTTG
GTGGAGCACTACCGTGGCACACCGGTAACGACGCTGGCGGCGCAGCTCAGCAGCGGGAGG
CGGGAGCACAAGCGCTCCGACCGCTGCTGGTGCCCGGAGGAGAAGGGGCGGTCGGCGCTG
CGCGGCTTCAGTAGCGCACTGTTGGGCGACGGCAAGGACGTGTACGGGCACCGCGTAGAG
GGCTGGGCTGGCGCGGCGGACAGCGTCATGCTGCATTCCTCGCCAGCTGCTCTGGAGGCC
GTGCATGCTAGCCTACCGGAGGCAGACCGCGCCTCTGGCCTGACGGTCGGCTTTGTGCGG
GTTGTATCCAGCGCGGTCTCCTCGGTGGGAGGCGTGCCAGGCTCCCCGGCGCGGCTGGCG
CTGGCGCGCCTGTTGGATTGCATGGGCAGCACCGCGCCCGCCGTCGCCTACATGCCGCTG
CTGTATACAGCCGCATCTGACGCGTGCGCTATGGTAGTGGAGAGCCAGCCTCAGCACCCA
GCCGTCTCGCTCGCACTGGCCACCCTAGCGGATGCGCTGAAGGATGGCGCACCCGTGCTG
TCGCGGGCGCTGACTGTGCTTTCTCAGCACGCCTCCATTGTACCGGTCGCCGCCATGCTC
CCAATCGCCGTGTTTCTGCGGCGGCTGAGCCAGCTGGCTCAGCTGTGTGGCACCGGTTGC
GACGGCGGGCCGTCGCTTGAGGCCACTGGCGCAGCCTCCGCTGAGACAGACGAGTGCCTG
CTAACGGCCAACTGCTGTGGCCTTGGTGTCGTGCGGCCGCGGTATGCCATGGGCATGGAC
GGCAAGAGTGGCAGCGCGGACGAGGAGGGAGGGGCGGCTTCCTGCAAACACAACTTCTGT
GCGCGGGGCCCGCGGACTGGCGGCATCTTCACGGTGTTCTGTGAGCACGGTGTGTGCTAT
GCGTTCTTTGTGTTGCCGCGGGCTGAGGGGCGGAATGAGATGTACAGCTGGATGGTGTCG
TTCCTACCGCGTGCACCTGAGGTGGTGGTGTACGACTTCGCGTGCAGCTTGCACGAGTAC
TGCCTCAACCGGGCCCCAGCGTTCTTCTGCGGCACACGCTTTGTGGTGGACCGCTTCCAC
TGGAGCAACCACACCGGCTGCTCGCACGCCTACAACATGTCACTTTACCCGGACCTGGAC
GGACTTAACTCGGAGGTGGCGGAGCAGGTGAACAGCCAGCTGCAGCCATACAAGTCCATG
GTCAGCCAGATGCGGCAGGACAACTTCATGTCCTGCTTGCGGTTTGTGCTGGGGAGCAAG
AACACCGAGCGCATCAGCAAGATTATGAAGCACCTGAAGCATGCGCTTACACTTTGA

Peptide Sequence

PEP ID

Cre09.g397364.t1.1
PEP Infomation

pacid=30780269 transcript=Cre09.g397364.t1.1 locus=Cre09.g397364 ID=Cre09.g397364.t1.1.v5.5 annot-version=v5.6
Sequence

MAEAPAKRHCSAPTGVSLLWRAKELGQLQAGALVFAAWVARSKSRFPEVVYYCSSDVSEE
QLGRADHEQLLGALQSLTSQHLLGQLCGLAPEQVAVTRLEEYDTSATSSSAAPTQPADVK
RSHKERLQRLLESAGQCSDGPFLAYVLTAGHKVVVKQLVGGGLARATFCSEEWGAAFEDK
MYIARTTWPPGAMSMELPAGHLGWYAAFLAYGRGAYVLHPTAESWLLPDAVAEEQPESTG
HVWRISSAPVAVQLEQRLGQPPRMTCTCSSFRVVGAAVSRCLHTAYVSSVEWLLEAGPPP
PRLVPAARCARSDDGRVLPGDYIWLPGRTLVACTRQTGALRCCHSGCGAACQHVTEARAA
FEPHLLPAVAVAAAPAAASSGQIRTPAGAEGDADDTQTQQAGAPAPAAAAAVADEAVEEA
VPPPSEVRYPYPPDKATIIAMMTFELSLMQLQGERLAAAGGGGGSGGANGSSGGGAVLKL
APPLPPSGCCACGQPYTERRVATVTTVYGPDTVGPVRAHLFELYSGCSCLACVMAYDGVA
DGLFRYSRSSFFCLRHMYTYADQLLGSGMNVEAYVSSQRRLAATTLLADAQRPKQFSATL
FRRTWQQFEARLDRFHTFKCPICDWRPRVLICDATAITFLVEHYRGTPVTTLAAQLSSGR
REHKRSDRCWCPEEKGRSALRGFSSALLGDGKDVYGHRVEGWAGAADSVMLHSSPAALEA
VHASLPEADRASGLTVGFVRVVSSAVSSVGGVPGSPARLALARLLDCMGSTAPAVAYMPL
LYTAASDACAMVVESQPQHPAVSLALATLADALKDGAPVLSRALTVLSQHASIVPVAAML
PIAVFLRRLSQLAQLCGTGCDGGPSLEATGAASAETDECLLTANCCGLGVVRPRYAMGMD
GKSGSADEEGGAASCKHNFCARGPRTGGIFTVFCEHGVCYAFFVLPRAEGRNEMYSWMVS
FLPRAPEVVVYDFACSLHEYCLNRAPAFFCGTRFVVDRFHWSNHTGCSHAYNMSLYPDLD
GLNSEVAEQVNSQLQPYKSMVSQMRQDNFMSCLRFVLGSKNTERISKIMKHLKHALTL*

Transcript Sequence

Transcript ID

Cre09.g397364.t1.1
Transcript Infomation

pacid=30780269 locus=Cre09.g397364 annot-version=v5.6
Sequence

TTTCAGCACCCGCCCGCGAGAAATTCGAAGCCCTCCCGCCGAGCAGAAAACTATGTCGCG
AGGCCCTCTTCGCGCCCGCGCGCGCCTGTTTCATTCCTTTCGCCGTCCCTACTCGCGACC
CCCTATAGTATTTATTGTCGGCGCCCCAGGCTAGGCCGCCCGAGGACTGCGCGACGCCAC
CACGCGGGCCTCCAGTCAAACGCCCCGGGCTGAATGGCTGAAGCGCCCGCCAAGCGCCAC
TGCAGCGCACCAACCGGCGTGTCGCTGCTTTGGCGTGCCAAAGAGCTGGGCCAGCTGCAA
GCTGGGGCGCTGGTGTTCGCGGCATGGGTGGCGCGGAGTAAGAGCCGCTTCCCGGAGGTG
GTGTACTACTGCAGCAGCGACGTGTCGGAGGAGCAGCTTGGGCGGGCCGACCACGAGCAG
CTTCTGGGAGCGCTGCAGAGTCTTACCTCGCAGCATCTGCTGGGTCAGCTCTGCGGCCTG
GCTCCGGAGCAGGTTGCGGTGACCAGGCTTGAGGAGTACGACACGTCAGCCACCAGCAGC
AGCGCCGCGCCCACCCAGCCTGCAGACGTCAAGCGCAGCCACAAGGAGCGCCTACAGCGG
CTGCTGGAAAGCGCAGGGCAGTGCTCGGATGGGCCCTTCCTGGCTTACGTACTTACAGCC
GGCCACAAGGTTGTCGTGAAGCAGCTTGTTGGCGGCGGCCTGGCGCGCGCCACCTTCTGC
AGTGAGGAGTGGGGCGCGGCATTCGAAGACAAGATGTACATCGCGCGCACAACATGGCCG
CCGGGGGCCATGAGCATGGAGCTGCCGGCGGGGCACCTGGGCTGGTACGCGGCGTTCCTT
GCGTACGGCCGCGGCGCATACGTCCTGCACCCAACCGCTGAGTCGTGGCTGCTGCCTGAC
GCGGTGGCAGAGGAGCAGCCTGAGAGTACCGGGCACGTGTGGCGCATCTCGTCCGCGCCT
GTCGCCGTGCAGTTGGAGCAGCGGCTTGGGCAGCCGCCCCGCATGACCTGCACCTGCAGC
AGCTTCAGGGTCGTGGGCGCCGCCGTGAGCAGGTGCCTGCACACCGCCTACGTCAGCAGT
GTGGAATGGCTGCTGGAGGCGGGGCCGCCGCCGCCTCGGCTGGTCCCAGCCGCACGGTGC
GCGCGGTCGGACGATGGGCGGGTGCTGCCGGGCGACTACATCTGGCTGCCGGGGCGGACG
CTGGTGGCGTGTACACGGCAGACAGGGGCGCTTCGCTGCTGCCACAGCGGCTGCGGCGCT
GCCTGCCAGCATGTCACGGAGGCACGGGCAGCGTTCGAGCCGCACCTGCTGCCTGCAGTA
GCAGTggcggcggcgccggcggcggcATCTTCTGGGCAAATCAGGACACCAGCGGGCGCG
GAGGGCGACGCAGATGACACCCAGACAcagcaggctggagcgccagcgccagcagcagca
gcagcagtagcggACGAGGCGGTTGAGGAGGCAGTGCCGCCGCCGTCGGAAGTGCGGTAC
CCATACCCGCCTGACAAGGCAACCATCATCGCCATGATGACGTTTGAGCTGTCACTGATg
cagctgcagggcgagcggctagcagcggcggggggtggcggcggaagcggtggtgccaat
ggcagcagcggcggcggcgCGGTCTTGAAGCTAGCCCCGCCGCTGCCGCCAAGCGGCTGC
TGTGCCTGTGGCCAGCCCTACACGGAGCGCAGGGTCGCAACCGTTACCACTGTGTACGGC
CCAGATACTGTCGGCCCCGTGCGCGCGCACCTGTTCGAGCTGTACTCCGGCTGCTCCTGC
CTGGCGTGCGTGATGGCGTATGACGGCGTCGCAGACGGGCTCTTTCGCTACAGCAGGAGC
TCCTTCTTCTGCCTCCGCCACATGTACACATATGCGGACCAGCTCCTCGGCAGCGGCATG
AACGTGGAGGCGTACGTCAGCTCACAGCGGCGCCTGGCAGCAACGACGCTGCTTGCGGAC
GCGCAGCGGCCGAAGCAGTTCTCTGCGACGCTGTTCCGGCGCACATGGCAGCAGTTTGAG
GCGCGGCTCGACCGCTTTCACACTTTCAAATGCCCCATCTGCGACTGGCGGCCTCGTGTG
CTGATCTGCGATGCCACGGCTATCACGTTCTTGGTGGAGCACTACCGTGGCACACCGGTA
ACGACGCTGGCGGCGCAGCTCAGCAGCGGGAGGCGGGAGCACAAGCGCTCCGACCGCTGC
TGGTGCCCGGAGGAGAAGGGGCGGTCGGCGCTGCGCGGCTTCAGTAGCGCACTGTTGGGC
GACGGCAAGGACGTGTACGGGCACCGCGTAGAGGGCTGGGCTGGCGCGGCGGACAGCGTC
ATGCTGCATTCCTCGCCAGCTGCTCTGGAGGCCGTGCATGCTAGCCTACCGGAGGCAGAC
CGCGCCTCTGGCCTGACGGTCGGCTTTGTGCGGGTTGTATCCAGCGCGGTCTCCTCGGTG
GGAGGCGTGCCAGGCTCCCCGGCGCGGCTGGCGCTGGCGCGCCTGTTGGATTGCATGGGC
AGCACCGCGCCCGCCGTCGCCTACATGCCGCTGCTGTATACAGCCGCATCTGACGCGTGC
GCTATGGTAGTGGAGAGCCAGCCTCAGCACCCAGCCGTCTCGCTCGCACTGGCCACCCTA
GCGGATGCGCTGAAGGATGGCGCACCCGTGCTGTCGCGGGCGCTGACTGTGCTTTCTCAG
CACGCCTCCATTGTACCGGTCGCCGCCATGCTCCCAATCGCCGTGTTTCTGCGGCGGCTG
AGCCAGCTGGCTCAGCTGTGTGGCACCGGTTGCGACGGCGGGCCGTCGCTTGAGGCCACT
GGCGCAGCCTCCGCTGAGACAGACGAGTGCCTGCTAACGGCCAACTGCTGTGGCCTTGGT
GTCGTGCGGCCGCGGTATGCCATGGGCATGGACGGCAAGAGTGGCAGCGCGGACGAGGAG
GGAGGGGCGGCTTCCTGCAAACACAACTTCTGTGCGCGGGGCCCGCGGACTGGCGGCATC
TTCACGGTGTTCTGTGAGCACGGTGTGTGCTATGCGTTCTTTGTGTTGCCGCGGGCTGAG
GGGCGGAATGAGATGTACAGCTGGATGGTGTCGTTCCTACCGCGTGCACCTGAGGTGGTG
GTGTACGACTTCGCGTGCAGCTTGCACGAGTACTGCCTCAACCGGGCCCCAGCGTTCTTC
TGCGGCACACGCTTTGTGGTGGACCGCTTCCACTGGAGCAACCACACCGGCTGCTCGCAC
GCCTACAACATGTCACTTTACCCGGACCTGGACGGACTTAACTCGGAGGTGGCGGAGCAG
GTGAACAGCCAGCTGCAGCCATACAAGTCCATGGTCAGCCAGATGCGGCAGGACAACTTC
ATGTCCTGCTTGCGGTTTGTGCTGGGGAGCAAGAACACCGAGCGCATCAGCAAGATTATG
AAGCACCTGAAGCATGCGCTTACACTTTGAGACTGGGAGGCATGGGGACGGTGCACGGTT
ACAGGGTTAGATGGGCGCCTGGGCGGTTAATGATTGGGATCACGTGCCATGAAGCGCTGC
AGCACGCCCTTTGAATGAAGCACTGCAGGCGATGCAAATGCTGTGCCCGCTGAGTGTGCA
GTTGATTGGCGTGAAGTCGATCGGGCGCTTAGTGGACCAGTGCGGGTAGTGCGGGCACAA
GCTGAGGTGTAAGCTGATAGATAA