Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g396800.t1.1
CDS Infomation

pacid=30780460 polypeptide=Cre09.g396800.t1.1 locus=Cre09.g396800 ID=Cre09.g396800.t1.1.v5.5 annot-version=v5.6
Sequence

ATGCGTTTAATACGTGTGCCAGCTGCGGCACTACTACTGGCAGTCGGGGCGTGCCTTCTG
AGCTTCGCCCATGGCCAAGGGTCAGCAGCGCTGTATAACCTTACGGCGCGCTATGAGGGA
AGCTCTTTGGCGTCCATATTTGGAGTCAGCGATGACTTCGCCATCAACCAAGCAGTCGTC
GGTGCGTGGCAAGCACAGCTAGCGCAGCGTGCCAGCACATTCCTGGAAGTGCCACTGAAC
CAGGTGGTAGTCCGCTCCTTCGCCATTGAGCAGCAGGCGGTGGGCGTGCGCCGCCGCACC
CGGGAGCTGTCGAGCCTGGACCTAGCCGTGGCGGCAGTCAGCAGCGGCAGTAGCAGCGGC
AGTAGCAGCAGGCGGCAGTTGCTGCAGTCGGGCGCGGGAACCACTGTGGCGCTGCTGGCG
ACGTTTGACGTGCTGGATACGCAGCCCGGCGCCCACGCCGCCTGGGACTTCACAGCCCTG
GCTACGGCGCTGGGGGCTGCCTCCGTGGCGGTCAACGGCGTTGACCGGAGCGCGGGGGTG
CTTGTCGGCTTCTTCGCATCCCCGCCACCCTCGCCGCGTCCGGGCGCAGCGGCCCTGAGG
GGCCAGCCGCCGCTGGCGCCACAGCTGTTTGCCTACTTCGACTCCATGCTGGCGCCGGGC
GCGCCGGGCCGGAGCAGGGAGGTGGTGTGGTACGACGACTCGGACTTCCTGGAGGAGCGG
CTGGACGGCACGCCACTCAACCTGGTGTGGCGCAACAAGACGGCCTGCTTCACGCGACCC
ACCTGCGGCGCCTGCTCCCGCGCCTGGGGCGCCACAACGGCGCCCTACGTCGTCACGCTG
TACTTCCGCGACCCGGTGCAGCTGGCCACCATTGCCATCCGCCAGGTCAACGCGCCGGCC
GTCAAGACCGTCCAGCTGCTGCCGTGGCCCGCCGTCAACATCTCCGGCGCGCCCGCGCCC
CGGACCGGCTTCCTGGGCCCCCCCCTGTTCAACGAGTCCGCCGACATCACGCCCTGCCCC
GGCACCCTCACGCTCGCAGTCCCCCGCAGGCGCAGCGGTCTGGCGGAGGCGGTGCCTGTG
GGCGGCAGCCAGGCGGAGCTGCCCAAGGCGCTGCGCAGGAGCGCGGTGGGCGGCGTGCGG
ATCTCTCTGAACGCGCCGCCGACGGGTGCGTCGCAGCGCACAGTGGTGGAATGGGTGCGC
TTCACGGGGCGTGCGCTGTATCCTCTGGACGCGTCCGAGTACTCCATGTGA

Peptide Sequence

PEP ID

Cre09.g396800.t1.1
PEP Infomation

pacid=30780460 transcript=Cre09.g396800.t1.1 locus=Cre09.g396800 ID=Cre09.g396800.t1.1.v5.5 annot-version=v5.6
Sequence

MRLIRVPAAALLLAVGACLLSFAHGQGSAALYNLTARYEGSSLASIFGVSDDFAINQAVV
GAWQAQLAQRASTFLEVPLNQVVVRSFAIEQQAVGVRRRTRELSSLDLAVAAVSSGSSSG
SSSRRQLLQSGAGTTVALLATFDVLDTQPGAHAAWDFTALATALGAASVAVNGVDRSAGV
LVGFFASPPPSPRPGAAALRGQPPLAPQLFAYFDSMLAPGAPGRSREVVWYDDSDFLEER
LDGTPLNLVWRNKTACFTRPTCGACSRAWGATTAPYVVTLYFRDPVQLATIAIRQVNAPA
VKTVQLLPWPAVNISGAPAPRTGFLGPPLFNESADITPCPGTLTLAVPRRRSGLAEAVPV
GGSQAELPKALRRSAVGGVRISLNAPPTGASQRTVVEWVRFTGRALYPLDASEYSM*

Transcript Sequence

Transcript ID

Cre09.g396800.t1.1
Transcript Infomation

pacid=30780460 locus=Cre09.g396800 annot-version=v5.6
Sequence

GACCAGTTACGGGCGCCGGCCTTTCTGCTGATAATATAAGAACCGATATTGCTCGTCGAG
GATCGTAGTATCGGTTTGACAACCAGGAGCTAAGCGCAGACGACAACTCCCGAGTAACTT
CTGAACTCACGCTCCAGAACTCGACGGACGGCTCTAGTCGATCACAATCACCTAGTACAC
TCTAAGAACACGTCGGTGGCCGTGTGAAGGCCCTAGCTCAGCGCAAAATTACCTGCCGAG
GCTTGTTAATTTACGTTGTTTAGTGTCGCCAGCATCTGCATAAGATACAGATATGCGTTT
AATACGTGTGCCAGCTGCGGCACTACTACTGGCAGTCGGGGCGTGCCTTCTGAGCTTCGC
CCATGGCCAAGGGTCAGCAGCGCTGTATAACCTTACGGCGCGCTATGAGGGAAGCTCTTT
GGCGTCCATATTTGGAGTCAGCGATGACTTCGCCATCAACCAAGCAGTCGTCGGTGCGTG
GCAAGCACAGCTAGCGCAGCGTGCCAGCACATTCCTGGAAGTGCCACTGAACCAGGTGGT
AGTCCGCTCCTTCGCCATTGAGCAGCAGGCGGTGGGCGTGCGCCGCCGCACCCGGGAGCT
GTCGAGCCTGGACCTAGCCGTGgcggcagtcagcagcggcagtagcagcggcagtagcag
cagGCGGCAGTTGCTGCAGTCGGGCGCGGGAACCACTGTGGCGCTGCTGGCGACGTTTGA
CGTGCTGGATACGCAGCCCGGCGCCCACGCCGCCTGGGACTTCACAGCCCTGGCTACGGC
GCTGGGGGCTGCCTCCGTGGCGGTCAACGGCGTTGACCGGAGCGCGGGGGTGCTTGTCGG
CTTCTTCGCATCCCCGCCACCCTCGCCGCGTCCGGGCGCAGCGGCCCTGAGGGGCCAGCC
GCCGCTGGCGCCACAGCTGTTTGCCTACTTCGACTCCATGCTggcgccgggcgcgccggg
ccggAGCAGGGAGGTGGTGTGGTACGACGACTCGGACTTCCTGGAGGAGCGGCTGGACGG
CACGCCACTCAACCTGGTGTGGCGCAACAAGACGGCCTGCTTCACGCGACCCACCTGCGG
CGCCTGCTCCCGCGCCTGGGGCGCCACAACGGCGCCCTACGTCGTCACGCTGTACTTCCG
CGACCCGGTGCAGCTGGCCACCATTGCCATCCGCCAGGTCAACGCGCCGGCCGTCAAGAC
CGTCCAGCTGCTGCCGTGGCCCGCCGTCAACATCTCCGGCGCGCCCGCGCCCCGGACCGG
CTTCCTGGGCCCCCCCCTGTTCAACGAGTCCGCCGACATCACGCCCTGCCCCGGCACCCT
CACGCTCGCAGTCCCCCGCAGGCGCAGCGGTCTGGCGGAGGCGGTGCCTGTGGGCGGCAG
CCAGGCGGAGCTGCCCAAGGCGCTGCGCAGGAGCGCGGTGGGCGGCGTGCGGATCTCTCT
GAACGCGCCGCCGACGGGTGCGTCGCAGCGCACAGTGGTGGAATGGGTGCGCTTCACGGG
GCGTGCGCTGTATCCTCTGGACGCGTCCGAGTACTCCATGTGATTGGGAGTGTGACAGAG
TGTGTGCTTTGTCAATGCTAGGCTGAGCAGGATGCTACGAGGTCGGCGGGTGGTGGGCGA
GACTGGAGTCGGACGAGAGGCGCCTGGCCTGGCCTGGCGATTTGGCCGGTGGGCGATGCG
GTAGGTTGGAAAGGTGAGGGTGCCAGCGGATTGGAACCGTTGGATTTGCTAAGAAGCCAT
AAAGCAACAGAGAGTTTAGGTTAATGTGACGCAGTGTACAAAGTTAAGCCTCAAGGCGAA
TAAAAGGGGTGCGAAGGTCGTGCGCAGCGATACGCCACGGCAGCCGTCTGACACGGCCAC
GCACGCGCATCGCCGCATTCAGCTGCTGCCATTATTTGGATGTCTTATTCCACTGTGCTA
GTGGGATCTTAGTAAATGGCATTACGGTCATTGCATGATCGTCTGTGCACCTGACTAGAC
CAGGCGCGTGGGGTTAGCAATTCCGCATTCAATGCATCAACACATCACATGGTCGGGCTC
CAATCGTGGGCTCCAATGCTCCATCAGTATTCAGGTTCATGGGTGTTTGTCTTGTCCTAG
TGTTGGCTGTGACACGCCGCGGCTGGTTTTGGTAGTCCCGCACGACAGGCGCTCCTGAGC
GCAGATGTCATGGGAGCGTCTGGGCGAATGAGCGGGCCTGCTGGGGAACGGATCCTGGCA
ACTGGCAGGCAGAGAGCGAGGAACGCGTGGTTGAGGCATACATTACGAGACCATTTAGCG
CGGGTGCTGTCTCTAGTGTCTAAAGTACCTGTGTATGCAAGTAGGGACGCAGTCATAGTC
CCTCAGTCATGTAGTAGGCGGCAAAAGCGCAACGGAATGGTGCGCGGCATGTTGATGCGT
GTTGATACCGGGCCCGTGCTCATCTTGCGGTCATCTCGCGGTCGGTTGATCATGGAATTA
CTCATTGatgctaaaatctgagccagtcagttttgtcgcattactcaactccatatggga
gcgtagggagtaggaacgtgccccctacaaggggagaacaataagtagaacgccatcata
tgttggggttataatggactacccggcccgggcctccggttttcgtgaggcaggaagaca
cgcaaagatcgtgcgcaccatcgtgtaaccagacatccac