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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre09.g386500.t1.2
CDS Infomation

pacid=30780431 polypeptide=Cre09.g386500.t1.2 locus=Cre09.g386500 ID=Cre09.g386500.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGAACAGATATGCGGCCTTAAGGTGGTCACAGCGGCCACTGCCCTCAGCGTGCCGTTC
AGCAGTGACCCCACACGGCTGCGGCTGGACTGGACAGCCCGCATGCGAGAGGCCAGGCGC
CGCCTGCGGCGTGTCGCCCACCTGCGACTCTCCGTCTTTGGCCGCGCCAGTGCAGCCTCA
GCCTACTGCACCTCCATGGTGACATGGCACATGGAACACAGCGGGTTGCCCGACGACATA
GCCCAGGAACTGGAGCGATTGGTGGCGCGGGTGGTCGACCGCCGACTGGCCCCGGACTCG
ACCGAGAAGCGCCTTACGGGCATCCCGACGGAGCTGCTTTATGGCCACCCCACCACTGGC
GGCTTCGGCGCACTGCCTATCCGGCAGCACGTGCGTGGCCGGCATGCGACATGGGCCGCA
CGCCTGGCCGCCCATGACGACATCCCGGCCGCCCCGCAGCGCCAGCCGTGGTGTGTCGCC
TATGACGTCTACCTCCGCGCGCACCACCCATCCCTGCGCCCCAGTAGCACGCTGACGGCA
GTACCGGTGGCGGAGGGCGCCGGCGACATCATCCCCAGCCACCCGCTCCCCGAGGATACC
GAGCGCACGATTTCAGCGCTGGGGTGGCTGCCGCCGGTGCAAGCACTGACTGAGGCACCG
GAGCCTGGTGCATGGTGCTTCACGGCGCCGCTGTGGGGCAACCCGCTCCTCACCCCGTCC
CCCGCGGCGGCCAACGGCGAGCAGGAGGAGGAGGATAGCGGCAGCGATGGCGAAACAGCT
GTGGAGCCCGTTCCGGCAGGAGTAGCGCGGCGCACGCGAGGGCGTGGTCTCGACTACCGC
CATAGGACGCTGCAAGCCTGCGCGCGTCTGGTGACCATCGGTGACTTAGTGCGAGCCCAC
GCTGCACGACCACCTGCGGCGGCTGCAGTCGACTGGAAGGGCCTTGTCGGCGACATCCCG
CCATCATGGTGGAGTGCAGCGCAGGCTCACGCCGCACAGCTGGCGAGCCCCGGCCCAGCG
CCTGTCCCGGCGCCGTCCACCAGTGAGGTCATCCGCACCACCATCATGCCGCGCATGGGC
TGGAAGCTCTCTGGCTCTGAGACCCTCAAAGTCCCCCTAGCGAAGCTGTCCGTCCGCATG
GCCACATCCATGCAGCTGGACGATGTGGCCACACGGCGGGCGGACCTACACGAGGATTAT
GAGTGCGCGGTACAGGGCCTGCCGCCGCGCGCTGTGGTGCGGCGGGAGGACCTGCCAGCA
GCTGCGGCTGCAACGCTTGGCGCCATTAGGGACACCCTGGCGCGCCTTTGGCAGGAGCAC
TACCTCTGGGATTGCGCGGTGGCGAAGGCCGTGGTGGCGCAGATCAACGCACACAACCCC
GGTCCGGCTCCCATCAGCCAAGCCCAGCTGTGGCTGGTCCAGGCGCCGCCGGGTTCTCAG
CAGTGTGTTTGGGACGTGGTGGTGATGGCGGCGCTGGCCGCCACAGAACATGGCCGGGTG
CGGCTGCGCGGGATGACGCGCGCCGCAGCGGCCCTGGGAATTCAGACGGCGGCGGCAGCA
GCTCCCGAGGCTGCGGTGGCAGGTGCAGTGGAGGCGGAACCCGATCTTGACGAGATCCCG
CCCACACAGCTGACGCCGCCGCAGCCAGGCGTCCACCCCGTCGAGCTTGCGCGCGCTGGC
GCAGTCGCGGACTTCTGGTCGCGGCTGATGCAGTTCGCGCAGCTCGGCGTGCCCCAAAAG
GGCTGGGATGGTATTGACGCCACTCACCTCATCCTGGCGGTGGTGAACGGCGAAATGCTG
TGCGCGTTGCCGCAAGCTATGGAGCTGGAGGCTTGA

Peptide Sequence

PEP ID

Cre09.g386500.t1.2
PEP Infomation

pacid=30780431 transcript=Cre09.g386500.t1.2 locus=Cre09.g386500 ID=Cre09.g386500.t1.2.v5.5 annot-version=v5.6
Sequence

MEQICGLKVVTAATALSVPFSSDPTRLRLDWTARMREARRRLRRVAHLRLSVFGRASAAS
AYCTSMVTWHMEHSGLPDDIAQELERLVARVVDRRLAPDSTEKRLTGIPTELLYGHPTTG
GFGALPIRQHVRGRHATWAARLAAHDDIPAAPQRQPWCVAYDVYLRAHHPSLRPSSTLTA
VPVAEGAGDIIPSHPLPEDTERTISALGWLPPVQALTEAPEPGAWCFTAPLWGNPLLTPS
PAAANGEQEEEDSGSDGETAVEPVPAGVARRTRGRGLDYRHRTLQACARLVTIGDLVRAH
AARPPAAAAVDWKGLVGDIPPSWWSAAQAHAAQLASPGPAPVPAPSTSEVIRTTIMPRMG
WKLSGSETLKVPLAKLSVRMATSMQLDDVATRRADLHEDYECAVQGLPPRAVVRREDLPA
AAAATLGAIRDTLARLWQEHYLWDCAVAKAVVAQINAHNPGPAPISQAQLWLVQAPPGSQ
QCVWDVVVMAALAATEHGRVRLRGMTRAAAALGIQTAAAAAPEAAVAGAVEAEPDLDEIP
PTQLTPPQPGVHPVELARAGAVADFWSRLMQFAQLGVPQKGWDGIDATHLILAVVNGEML
CALPQAMELEA*

Transcript Sequence

Transcript ID

Cre09.g386500.t1.2
Transcript Infomation

pacid=30780431 locus=Cre09.g386500 annot-version=v5.6
Sequence

attgtacttagtgggcgggacttgggacgcgtgatacttagcttgtctgctgcacgccgc
ctctcttgtcgccgttgccattcacatgcccgtgacacttcctcgctgccgccctatgcc
catgcttccactttcgcctataggtgagctcgactacgaccagcgggcgggaatctggga
attaggcgtgctgggtaaacgttgtttagcgcgcccagggtgcggagcatggacgcatgc
aggtgcaacgcggggtcaggccgaatggtcgcccgtggggttccaggcttatcgcgggta
agtatgactacctgggtcacgacagtcacgcgacgctcggtaaaatggaacagatatgcg
gccttaaggtggtcacagcggccactgccctcagcgtgccgttcagcagtgaccccacac
ggctgcggctggactggacagcccgcatgcgagaggccaggcgccgcctgcggcgtgtcg
cccacctgcgactctccgtctttggccgcgccagtgcagcctcagcctactgcacctcca
tggtgacatggcacatggaacacagcgggttgcccgacgacatagcccaggaactggagc
gattggtggcgcgggtggtcgaccgccgactggccccggactcgaccgagaagcgcctta
cgggcatcccgacggagctgctttatggccaccccaccactggcggcttcggcgcactgc
ctatccggcagcacgtgcgtggccggcatgcgacatgggccgcacgcctggccgcccatg
acgacatcccggccgccccgcagcgccagccgtggtgtgtcgcctatgacgtctacctcc
gcgcgcaccacccatccctgcgccccagtagcacgctgacggcagtaccggtggcggagg
gcgccggcgacatcatccccagccacccgctccccgaggataccgagcgcacgatttcag
cgctggggtggctgccgccggtgcaagcactgactgaggcaccggagcctggtgcatggt
gcttcacggcgccgctgtggggcaacccgctcctCACCCCGTCCCCCGCGGCGGCCAACG
GCGAGCAGGAGGAGGAGGATAGCGGCAGCGATGGCGAAACAGCTGTGGAGCCCGTTCCGG
CAGGAGTAGCGCGGCGCACGCGAGGGCGTGGTCTcgactaccgccataggacgctgcaag
cctgcgcgcgtctggtgaccatcggtgacttagtgcgagcccacgctgcacgaccacctg
cggcggctgcagtcgactggaagggccttgtcggcgacatcccgccatcatggtggagtg
cagcgcaggctcacgccgcacagctggcgagccccggcccagcgcctgtcccggcgccgt
ccaccagtgaggtcatccgcaccaccatcatgccgcgcatgggctggaagctctctggct
ctgagaccctcaaagtccccctagcgaagctgtccgtccgcatggccacatccatgcagc
tggacgatgtggccacacggcgggcggacctacacgaggattatgagtgcgcggtacagg
gcctgccgccgcgcgctgtggtgcggcgggaggacctgccagcagctgcggctgcaacgc
ttggcgccattagggacaccctggcgcgcctttggcaggagcactacctctgggattgcg
cggtggcgaaggccgtggtggcgcagatcaacgcacacaaccccggtccggctcccatca
gccaagcccagctgtggctggtccaggcgccgccgggttctcagcagtgtgtttgggacg
tggtggtgatggcggcgctggccgccacagaacatggccgggtgcggctgcgcgggatga
cgcgcgccgcagcggccctgggaattcagacggcggcggcagcagctcccgaggctgcgg
tggcaggtgcagtggaggcggaacccgatcttgacgagatcccgcccacacagctgacgc
cgccgcagccaggcgtccaccccgtcgagcttgcgcgcgctggcgcagtcgcggacttct
ggtcgcggctgatgcagttcgcgcagctcggcgtgccccaaaagggctgggatggtattg
acgccactcacctcatcctggcggtggtgaacggcgaaatgctgtgcgcgttgccgcaag
ctatggagctggaggcttgaaagggatcagcccttaggagaagcgcgtgagcactaggct
tatcgcgggtaagtatgactacAGGCTTATCGCGGGTATCGCGGGTATGACTCTGCTGGC
CCCTACCTGCTGTGGGCTTGTGGCTACGAATTTGAGCTTTTCGTGCCTTGTGCggcggcg
tatgtgatggcggcggcgcagggcctggcagctgcggcggcagtgcagggcccagcggcg
gcgcaggacctggcggcagcggcggcagcggccctgggcccagcagtggcggcgtgcatg
tgcgtagcggagggggcgaacaagtaaggtcatgtggaagaggagagcgtggcgccgcct
gagaagcggcgccggcgcgcaggttgagacctgtctgtggctggtctgcggtctctgctg
gcgagcatagcgGGGCTAACTTCATCACTTTTCCATGGCCGACTACGAGTCCATGTCCGC
CTTGCCCAGGTCATCACGTGTGCGGGGACTTCGTCGTGCCTTGTGCCTTCGTGAGCCCGG
GTACCTCCAGCCACGTCC