Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre08.g378850.t1.2
CDS Infomation

pacid=30773952 polypeptide=Cre08.g378850.t1.2 locus=Cre08.g378850 ID=Cre08.g378850.t1.2.v5.5 annot-version=v5.6
Sequence

ATGATGCAGGCTAGCTCTCGCTGCGCGTCAGGTTCACGGAGCGTACCTGCACGCGTCTCC
TCACGGGCCAGCGCTGTCAGCGTGCGCTGCACCATCCAGGAGGCCCGCCCGGCGTCCACA
CCTGCCGCCGCCAGCACCCCCGCGCTCAATGGCGTCGCGTCCCCTGTCGCCGGCGCCGTG
CCGCCCATCGCGCTGCCACGTGGAGCCGTGCCCAACCGGCCCATCCTGGAGGTTCCGGAC
TGGGAGAACCAGTACCGGCGCCACACCGCCTCGGCGCGGCACGGCAGCGCCGGCACGCCC
GGCTCGCTCAGCCGGCTACGCCTGTTCTCGGGGACATCCAATCCGACCCTGGCCACCGAG
GTGGCTCACTACCTGGGCCTGGAGCTGGGCAAGATCAAGTGCAAGCGGTTCGCGGACGGC
GAAATCTACGTGCAGGTGCAGGAGTCCATCCGCGGCTGCGACGTGTTCCTGATCCAGCCC
ACCTGCCCCCCCGTGAACGACCACCTCATGGAGCTGCTCATCACCATAGACGCCTGCCGC
CGCGCCTCCGCCAGGTCCATCACCGCCGTCATCCCCTACTACGGATACGCGCGCGCAGAC
CGCAAGGTCCAGGGCCGCGAGTCCATCGCCGCCAAGCTGACCGCCAACCTGATCACCGAG
GCCGGCGCCGACCGCGTGCTGGCCATCGACCTGCACAGCGGCCAGTGCGTGGGCTACTTC
GACATACCCGTGGACCACGTGTACGGCGAGACGGTGATCCTGGACTACCTGGCCTCCAAG
CGCATCGCCACCGGGGACCTGGTGGTGGTGTCGCCCGACGTGGGCGGCGTGGCGCGGGCG
CGCGCATTCGCCAAGAAGCTCAACGATGCGCCGCTGGCCATTGTGGACAAGCGCCGCTCG
GCCCACAACGTGAGCGAGGTGATGAACCTCATCGGCGACGTCAAGGGCAAGGTGGCGGTG
CTGGTAGACGACATGATCGACACGGCCGGGACAATCACTAACGCCGCCAAGGTGCTGCAG
AAGGAGGGCGCGCGCGAGGTGTATGCCTGCGCCACGCACGCCGTGTTCTCGCCGCCCGCG
GTGGAGCGCCTGTCCAGCGGCGTGTTCCAGGAGGTGATTGTGACCAACACCATTCCGGTG
CCGCCGGAGAACGTGTTCCCGCAGCTCACCATCCTGTCCGTAGCCAACCTGCTGGGAGAG
ACCATCTGGCGCGTCTACAACGCCGCGTCCGTGCAGGCGCTGCGGGACTAG

Peptide Sequence

PEP ID

Cre08.g378850.t1.2
PEP Infomation

pacid=30773952 transcript=Cre08.g378850.t1.2 locus=Cre08.g378850 ID=Cre08.g378850.t1.2.v5.5 annot-version=v5.6
Sequence

MMQASSRCASGSRSVPARVSSRASAVSVRCTIQEARPASTPAAASTPALNGVASPVAGAV
PPIALPRGAVPNRPILEVPDWENQYRRHTASARHGSAGTPGSLSRLRLFSGTSNPTLATE
VAHYLGLELGKIKCKRFADGEIYVQVQESIRGCDVFLIQPTCPPVNDHLMELLITIDACR
RASARSITAVIPYYGYARADRKVQGRESIAAKLTANLITEAGADRVLAIDLHSGQCVGYF
DIPVDHVYGETVILDYLASKRIATGDLVVVSPDVGGVARARAFAKKLNDAPLAIVDKRRS
AHNVSEVMNLIGDVKGKVAVLVDDMIDTAGTITNAAKVLQKEGAREVYACATHAVFSPPA
VERLSSGVFQEVIVTNTIPVPPENVFPQLTILSVANLLGETIWRVYNAASVQALRD*

Transcript Sequence

Transcript ID

Cre08.g378850.t1.2
Transcript Infomation

pacid=30773952 locus=Cre08.g378850 annot-version=v5.6
Sequence

GATGTACAAAACCCCGCGATAAGGGAATTGGTGGAGCCCAGCAGTGAGCAGTCCCATTCC
GCAGGCCCACCACGGTTCCACGCCTCCAGGTCAGCTGTGCAAGCAAGTTGTCTACGCACT
TTGCACTTCAGTAATTGCAGCTGTATTTACAAATTCTGCTAAGACGACTGCGTAGGGGCG
CTAGTGTAGCGAAGGAGTTCGGTCGTCGGATGCGTTTGTAGCAGCAAAGATGCAGTGCCT
AGATAAAAGCAGGATGATGCAGGCTAGCTCTCGCTGCGCGTCAGGTTCACGGAGCGTACC
TGCACGCGTCTCCTCACGGGCCAGCGCTGTCAGCGTGCGCTGCACCATCCAGGAGGCCCG
CCCGGCGTCCACACCTGCCGCCGCCAGCACCCCCGCGCTCAATGGCGTCGCGTCCCCTGT
CGCCGGCGCCGTGCCGCCCATCGCGCTGCCACGTGGAGCCGTGCCCAACCGGCCCATCCT
GGAGGTTCCGGACTGGGAGAACCAGTACCGGCGCCACACCGCCTCGGCGCGGCACGGCAG
CGCCGGCACGCCCGGCTCGCTCAGCCGGCTACGCCTGTTCTCGGGGACATCCAATCCGAC
CCTGGCCACCGAGGTGGCTCACTACCTGGGCCTGGAGCTGGGCAAGATCAAGTGCAAGCG
GTTCGCGGACGGCGAAATCTACGTGCAGGTGCAGGAGTCCATCCGCGGCTGCGACGTGTT
CCTGATCCAGCCCACCTGCCCCCCCGTGAACGACCACCTCATGGAGCTGCTCATCACCAT
AGACGCCTGCCGCCGCGCCTCCGCCAGGTCCATCACCGCCGTCATCCCCTACTACGGATA
CGCGCGCGCAGACCGCAAGGTCCAGGGCCGCGAGTCCATCGCCGCCAAGCTGACCGCCAA
CCTGATCACCGAGGCCGGCGCCGACCGCGTGCTGGCCATCGACCTGCACAGCGGCCAGTG
CGTGGGCTACTTCGACATACCCGTGGACCACGTGTACGGCGAGACGGTGATCCTGGACTA
CCTGGCCTCCAAGCGCATCGCCACCGGGGACCTGGTGGTGGTGTCGCCCGACGTGGGCGG
CGTGGCGCGGGCGCGCGCATTCGCCAAGAAGCTCAACGATGCGCCGCTGGCCATTGTGGA
CAAGCGCCGCTCGGCCCACAACGTGAGCGAGGTGATGAACCTCATCGGCGACGTCAaggg
caagGTGGCGGTGCTGGTAGACGACATGATCGACACGGCCGGGACAATCACTAACGCCGC
CAAGGTGCTGCAGAAGGAGGGCGCGCGCGAGGTGTATGCCTGCGCCACGCACGCCGTGTT
CTCGCCGCCCGCGGTGGAGCGCCTGTCCAGCGGCGTGTTCCAGGAGGTGATTGTGACCAA
CACCATTCCGGTGCCGCCGGAGAACGTGTTCCCGCAGCTCACCATCCTGTCCGTAGCCAA
CCTGCTGGGAGAGACCATCTGGCGCGTCTACAACGCCGCGTCCGTGCAGGCGCTGCGGGA
CTAGATAGAGGGCGCTGGGGCGTGGGGTGAAGCGTGGGATGGAGGGCGTGCGGCGCCGGC
GGCTGGCGACCGGCGGGGAATGGAGCTGGAGGAGGAGAGGCAGTGAGCGGAGGTGACCAA
GGGCCAAGGGAGGCGTTGAAGGGGTGCAGGCAGCGAACAGAGCCGGGCTGGCGAGAGCGG
CTGCGACGGCGCCCGCAGGGCCGCTTGCAGCCGAGGCATGCATGGAGGAAAGGCGCGGCG
CGGAGGCTGTGCTATCGGAGCTGGCGGGCAAGGCAGCTGCTAGTGCTGCCGCTTCGCTCA
CCGTGACGGCAGCTGCCGCACAGGCGCCAGGCGGTTGCCAAGCTTGGGGCTGGCCGCAGC
TTTAGAAGCGGGTGGCTGCAGCGTTGCGCTGTGTGCTCTGGAGGCTGCTGGGCAGCGGGA
TGGAAAGATCTTGGATGTTTGTGTTTGACAGGACGCCCGCGCTGGCGCGGGTAGACTGTT
AGTTTAGGACCACACTGCTGTTTTACTACGACGGAACTCTGGACGTGACGACACACATCC
GTAGTTGGCGCACCTGCGCGGAGAGCGTGGAAGGGAGCTGGAGAGCACTCGCGAGTCGCG
GGGTTTGGCACATGGGTGGGTCCGGGGCCCAGGAGGTGCACGGACACAAAGTGTATATGG
CCGGCAGTAGGCGCCATGGGGCAGCAGGGCGTGCGATCTAGGGTGCAGTGGACCCAGGTG
GCGCCGGGGGGCAGGCAGGGGCGCGCACAGCCGCACACGTTGCTAGTAGCTGTGCACAAG
CGACGCGCACACGAGTGTCAGGGCGGCCAGGTAACTCTTGGCATGCGGGTTGGGCGACGG
CGTTTTACCTTCGTGCGTGACTTGGGAACAAATGAAAGACATGCGCGTGTGGTGGTAATA
AAGCGGTGAGGATACCGACTTGGGTGTGGCAGGAACACTGCCCTCGGGCGGTTGTGGATT
GCCCCGGCGCGTGGATGGGTGGGTGTCGGCTGCAAGGGCCAAAAGTGCGCAAGTTTGGAG
CGGGGATTCGAGGAAGGGCAGCGGCCCCAACCGTTGGCGTGTGCCGTGTAAGGCTGTAAG
CGTTGTTCCCA