Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre06.g303500.t1.2
CDS Infomation

pacid=30780054 polypeptide=Cre06.g303500.t1.2 locus=Cre06.g303500 ID=Cre06.g303500.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCAGACGGCGAGCAAAAGGCCTCTCTGGCCTTCTCGTTTCAGAAGAAGAAAACTGTC
CAGAAGGTCGCTGTTAACCTCGAAGAGAACAAAAATGCTGGGCAGCTCATTACCGGCTTC
GATGGCGCGAAAGCTCAGGTCGTTGGCGGGGAGGCGGAGGCAAAGGCGCTGGTGATTCCC
AAGTTGGAGAACACTTTTAAAACGGGTGTGGGTCCAAAGAAGTTCACGCCCACGTTCAAG
CCGCCCAGCGGCGAGGTGGTCAACCTGAAGGAGGGCGAGGACAAGTTCGTGCAAGCGGAG
TCCACCGTCCCCACTATCACCGAGTATGGCCTGCAGCTGCGCGACGTCAAGCCAGAGGAG
CGCGTGGCGGCGGCGGCAGCAGCAAACGGGGGCAAGAACATGGCTGCCGCTGCGGCGGAG
GAGAAGGCCTACAAGGACTCGGTGGAAGACCTGCCGGAGGTGGCCGACCTTGACGCCTAC
GAGGCGATGCCCATCGAGGAGTTTGGCCGCGCCATGCTCCGCGGCATGGGCTGGGAGGAG
GGCATGGGCGTGGGGCGCAACCGCAAGCAGGTGGACGCCATCGAGTACGTGCGGCGCCCG
GAGCGCCTGGGGCTGGGCGCGCAGCCGGTCAAGGTGTCGGAGGACAAGAGCAAGGTCGTC
AAGATGGGCGACAAGCCGCGCAAGCAGGATTTGGTGCTGGCGCCGGACGCGGACGGCCGG
CAGCGCAATGTGCGCACACTGGACGAAAAGCTGGTGTCGCGGGCCACGGTCCTGCCGGGC
CCGCAGCCCAACAAGCCCATGCGCATCATGACCGGCGCGCACAGCGGCCTGCTGTGTACG
GCGCTGGAGGCACTGCCCAAGCCGGAGGGGCGGCCGGAGCGCTGGCGGGTGCGGCTGGCG
GCCAGCAATGAGGACGTGGAGGTGCTTGCCAGCGAGCTCGGCGAGCGCTGGCAGAAGGAC
CCGGCGCCTGCAGCAGGGGGCCGGGAGGAGCGCGGCGGAAGTGCGGGGCCGCGGCGGGGC
ATGGAGGAGGAGGAGGGCGGGCGCGCGGCGCCCAGCGGGCGTGGGCGGAGTGGCAGCGCG
GACCCAGACGGTGACTACCGGAGAGGCGGCAGCGCTGGTGACGACCGCGACAGGCGGAGA
GACAAGGACAGGGAACGTGACCGCGACTTGGAACGGGACAAGGACAGGGGCCGGGACGAG
GACCGTGGGGGCGGCGGCAGCAAGCGCAAGCACCGGGACGACGAGGAGGAGGACGGCGGT
GGCGGCAAGCACCGCAAACACCACAAGCAGGACAAGCGGCAGAAGCACGACAAGAAAGAG
AAAAAGGACAAGAAGCACAAGAAGGAATCTAAGGAGCACCGGCACCGCGACCGGGGGCGA
AGCGAAAGCGACAGCGAGGACGACAGTGGCGGCGACGCAAGGCCCTCTGGGCCCTCCTGG
CTGCTCCCACACATCAAGGTTCGCATCGTGGACAAGTCGGTGCGCGGCGGGAAGCTGTAC
CTGAAGAAGGGCACGCTGGTGGACGTGCACCCGGGCGCGACAGCTGACGTGGCGGTGGAC
GACACAGGCGATGTGTTGCGGCTGCCGCAGTCGTCGCTGGAGACGGTGGTGCCCAAGCAC
GACGGCGCGCCGGTCATGGTGGTGGGCGGGCCGCACCGAGGGCAGCGCGGGCGGCTGCTG
CAGATCAACGTCAATGCTGGCGCTGCGGCCGTTCAGCTGAGCGCGGACTTCAGCATAGTG
CGGTTGCTGCTTGATGACGTGGCTGGGTACGCTGGGGAGATGGAGGAGGAGTGA

Peptide Sequence

PEP ID

Cre06.g303500.t1.2
PEP Infomation

pacid=30780054 transcript=Cre06.g303500.t1.2 locus=Cre06.g303500 ID=Cre06.g303500.t1.2.v5.5 annot-version=v5.6
Sequence

MADGEQKASLAFSFQKKKTVQKVAVNLEENKNAGQLITGFDGAKAQVVGGEAEAKALVIP
KLENTFKTGVGPKKFTPTFKPPSGEVVNLKEGEDKFVQAESTVPTITEYGLQLRDVKPEE
RVAAAAAANGGKNMAAAAAEEKAYKDSVEDLPEVADLDAYEAMPIEEFGRAMLRGMGWEE
GMGVGRNRKQVDAIEYVRRPERLGLGAQPVKVSEDKSKVVKMGDKPRKQDLVLAPDADGR
QRNVRTLDEKLVSRATVLPGPQPNKPMRIMTGAHSGLLCTALEALPKPEGRPERWRVRLA
ASNEDVEVLASELGERWQKDPAPAAGGREERGGSAGPRRGMEEEEGGRAAPSGRGRSGSA
DPDGDYRRGGSAGDDRDRRRDKDRERDRDLERDKDRGRDEDRGGGGSKRKHRDDEEEDGG
GGKHRKHHKQDKRQKHDKKEKKDKKHKKESKEHRHRDRGRSESDSEDDSGGDARPSGPSW
LLPHIKVRIVDKSVRGGKLYLKKGTLVDVHPGATADVAVDDTGDVLRLPQSSLETVVPKH
DGAPVMVVGGPHRGQRGRLLQINVNAGAAAVQLSADFSIVRLLLDDVAGYAGEMEEE*

Transcript Sequence

Transcript ID

Cre06.g303500.t1.2
Transcript Infomation

pacid=30780054 locus=Cre06.g303500 annot-version=v5.6
Sequence

ACTCTTACACTTCTGCGCTGTGCCTCACAGTAGACCGAGAGCCTGCAGAGGTGAAGCCCA
ACCGGGCCCAAGCCCATGTCGGCCATGTGGATCCACTAGTAGCTCTAGAAGCACTACACT
CAATACAGCTTGTAGTCCAGTGCTTCGATGGCAGACGGCGAGCAAAAGGCCTCTCTGGCC
TTCTCGTTTCAGAAGAAGAAAACTGTCCAGAAGGTCGCTGTTAACCTCGAAGAGAACAAA
AATGCTGGGCAGCTCATTACCGGCTTCGATGGCGCGAAAGCTCAGGTCGTTGGCGGGGAG
GCGGAGGCAAAGGCGCTGGTGATTCCCAAGTTGGAGAACACTTTTAAAACGGGTGTGGGT
CCAAAGAAGTTCACGCCCACGTTCAAGCCGCCCAGCGGCGAGGTGGTCAACCTGAAGGAG
GGCGAGGACAAGTTCGTGCAAGCGGAGTCCACCGTCCCCACTATCACCGAGTATGGCCTG
CAGCTGCGCGACGTCAAGCCAGAGGAGCGCGTGGCGGCGGCGGCAGCAGCAAACGGGGGC
AAGAACATGGCTGCCGCTGCGGCGGAGGAGAAGGCCTACAAGGACTCGGTGGAAGACCTG
CCGGAGGTGGCCGACCTTGACGCCTACGAGGCGATGCCCATCGAGGAGTTTGGCCGCGCC
ATGCTCCGCGGCATGGGCTGGGAGGAGGGCATGGGCGTGGGGCGCAACCGCAAGCAGGTG
GACGCCATCGAGTACGTGCGGCGCCCGGAGCGCCTGGGGCTGGGCGCGCAGCCGGTCAAG
GTGTCGGAGGACAAGAGCAAGGTCGTCAAGATGGGCGACAAGCCGCGCAAGCAGGATTTG
GTGCTGGCGCCGGACGCGGACGGCCGGCAGCGCAATGTGCGCACACTGGACGAAAAGCTG
GTGTCGCGGGCCACGGTCCTGCCGGGCCCGCAGCCCAACAAGCCCATGCGCATCATGACC
GGCGCGCACAGCGGCCTGCTGTGTACGGCGCTGGAGGCACTGCCCAAGCcggaggggcgg
ccggAGCGCTGGCGGGTGCGGCTGGCGGCCAGCAATGAGGACGTGGAGGTGCTTGCCAGC
GAGCTCGGCGAGCGCTGGCAGAAGGACCCGGCGCCTGCAGCAGGGGGCCGGGAGGAGCGC
GGCGGAAGTGCGGGGCCGCGGCGGGGCATGGAGGAGGAGGAGGGCGGGCGCGCGGCGCCC
AGCGGGCGTGGGCGGAGTGGCAGCGCGGACCCAGACGGTGACTACCGGAGAGGCGGCAGC
GCTGGTGACGACCGCGACAGGCGGAGAGACAAGGACAGGGAACGTGACCGCGACTTGGAA
CGGGACAAGGACAGGGGCCGGGACGAGGACCGTGGGGGCGGCGGCAGCAAGCGCAAGCAC
CGGGACGACGAGGAGGAGGACGGCGGTGGCGGCAAGCACCGCAAACACCACAAGCAGGAC
AAGCGGCAGAAGCACGACAAGAAAGAGAAAAAGGACAAGAAGCACAAGAAGGAATCTAAG
GAGCACCGGCACCGCGACCGGGGGCGAAGCGAAAGCGACAGCGAGGACGACAGTGGCGGC
GACGCAAGGCCCTCTGGGCCCTCCTGGCTGCTCCCACACATCAAGGTTCGCATCGTGGAC
AAGTCGGTGCGCGGCGGGAAGCTGTACCTGAAGAAGGGCACGCTGGTGGACGTGCACCCG
GGCGCGACAGCTGACGTGGCGGTGGACGACACAGGCGATGTGTTGCGGCTGCCGCAGTCG
TCGCTGGAGACGGTGGTGCCCAAGCACGACGGCGCGCCGGTCATGGTGGTGGGCGGGCCG
CACCGAGGGCAGCGCGGGCGGCTGCTGCAGATCAACGTCAATGCTGGCGCTGCGGCCGTT
CAGCTGAGCGCGGACTTCAGCATAGTGCGGTTGCTGCTTGATGACGTGGCTGGGTACGCT
GGGGAGATGGAGGAGGAGTGATGCCATGGCGAGCGGAGGAGAGGAGAAGGCGCGGCGGAT
GGGCAGTTTCCCGGCATTTGGCGACTCTAGTAATTCTCGGATGGTGTGTATGTTGGCTGG
GACTTCTTTCATGGAGCCACGCGCCAAGGCACAGACTCTTTGAACGTAGCTAGCGTGTCG
CGGCATGTGCGCGCTCTTAAGAGCAGCGAGGAaacaaggaggtggctgccttagggaggc
aggaaaagggctgagccctcccctcccgggtcgttatcaacccagccaccttgacgcggg
cgcctactaagcacacgcctctatgttgggggcctttggcatccccgcaaatccggacgt
ggccggttgggtggggtgcacagtccgtgctaacccgcagctaacaaactagtcacgtca
ctcgccgccaatcgacacgtgcaccctcagccccacgccctgctagcgccgttcaggctc
tcagcGAGGAGGAAATCCGACCTGAGGTCAGAACTCACGTGGAGGGCACGCGTGGAAGGC
GCTCACGGGGTCTCAGGCGGGTTGCAAGTGCAACATGTTGCCGTGGTGTCAGGCCGGTTG
CAATTGCAACAAGACGCTGTGTCATGATATCTCCTCCGGGTGTAATATGCAAGCACA