Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre06.g259550.t1.2
CDS Infomation

pacid=30779794 polypeptide=Cre06.g259550.t1.2 locus=Cre06.g259550 ID=Cre06.g259550.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCGTTCCTCGCTGACTTCTGGGAGAAACTTAAGAAAGGAGATTACAGGGCCATCGAC
ATCGCGTTGACGGCGGCGCTCACGCTGGGCGCAACCATTTCTACCGGCATCTCCATTTAT
GAGGTCTACCTGAAGCGGCAGACCCAGGCTGCCGCACGTGAAGCCGCCAGCAGCGGTCCA
AAGCGAGGCAGGCCACTGCCGGAGAGCCTGATTGCTCTGCACGGGCTGCGACCCGAGCAG
CTTCAGTTCCTGGACGTGCACGAGGGGCTGATGCTGACGTGTCTGGTGCCGCCGGGGCAG
CTGGCCCTGGCCTCGGGCGAGGTGTACGGCGTGGACGTGGTGCTGGACGACCTGAAGCGC
AAGCTGCTGCGGCCGGTGCAGCTGCGCGACTGGTACAGCCGCGGCCTGTGGCGCCTGCCC
AAGGGCGTGCTGCTGTACGGACCGTCAGGCACTGGCAAGACGTCGCTCGCCAAGGTGATC
GCCAAGGCCGGCCAGTTCCGGTTCCTGCACCTGAGCGCCGCGGCCATCAGCGACAAGTGG
ATCGGCGAGGGGCCCAAGCGCGTGCGGGCCGCGTTCAGCCTGGCGCACAGGGTGGCGCCC
TGCATCATATTCGTGGACGAGGTGGACACGCTGCTGTCGCGGCGCACCGACGCCAACCAG
CCGGGCGGACACGAGGCCTACGACCAAGTCAAGACCGAGTTCATGTCGCAGTGGGACGGC
CTGCTGAGTGAGGCGGCGCAGCTGAGCGGGGTGGTGGTGATGGGCGCAACCAACCGGCGG
CAGGCGCTGGACCCAGCCGTGCTGCGCCGCTTCACCCTGCAGTACGAGGTCCCGGCTCCC
GGACTGCCCCAACGCCGGGCCATCCTGCTGGGCTACCTGCGCCGCCACGTCGGACCCGTG
GAGCACGACCTGCTGCCGCCGGGGCTCATGGCGGCGGAGGCGCGGGCGGCACTGCGCCGC
CGGCAGCGGCAGCAGCAGAAGCAGGCCCGGCAGCAGCAGCCGGTGGCGGCGTCAGAGGCG
GCGGCGGCGGCAGAGGCGCGGGAAGAGGGGGCGGGGCGTGTGGAGGAGGGAGAGGTGTCG
TCCGATGCCGCCTGCTCCAGCGTCAGCGCCAGCGCCAGTGACGCCTCGTGCGACGGGCCC
GAACCGAGTAGTGACATCAGCACCAGCGATGTGGAGTGTGGTGCGGCCGCTGGCAGGAGG
GGCCGCAGCTCGGGCGCAGGTGACGACACCAGCACCAGCACAAACACAACCGATGCCAGC
AGAGACACGCTCACGGACCCTCAGAAGCGCGACATCAAACTCAACACCACCAGCACGAGC
AGTAGCAGCAGTGGCGGCACCCTCATCAAAGGCCCCCAACAGAAGGCTCACGTGGACTCA
CCAGCTGCGGGGCAAACAGCGGCTGCGGAGGCGGCGGCACCGGCGACCATGGTGACAGCA
GACAACGAGCCCGGCACCGAGCCTGACGCCGGGGCAGAGGGGGAAGCGGGATTGCCGCTG
GACGCTGCCGATGATCACAATGACGACGATGAGACGGGTGCTGACAGTGATGGCGGAAGC
GGCGATGACGTTGACGCGCCCGGTCTGGACTGGCTGGCTGCGGCGACGGAGGGCCTCACG
GGGGCCCACCTGCGGGAGCTGTGCCACCGCGCGGCGCTGCTGGTGCTGGATGAGGTGCCC
GAGGAGCAGCTCAAGAGCTTGCACCCGGACCGGGGCGGCGTGGAAGTGCTGCGGGCGCTC
TGTCGGCACGACTTTGAAGTGGCGCTGCGGCTGCAGAGCGGCGCACCTCTGGCGGGGTGA

Peptide Sequence

PEP ID

Cre06.g259550.t1.2
PEP Infomation

pacid=30779794 transcript=Cre06.g259550.t1.2 locus=Cre06.g259550 ID=Cre06.g259550.t1.2.v5.5 annot-version=v5.6
Sequence

MSFLADFWEKLKKGDYRAIDIALTAALTLGATISTGISIYEVYLKRQTQAAAREAASSGP
KRGRPLPESLIALHGLRPEQLQFLDVHEGLMLTCLVPPGQLALASGEVYGVDVVLDDLKR
KLLRPVQLRDWYSRGLWRLPKGVLLYGPSGTGKTSLAKVIAKAGQFRFLHLSAAAISDKW
IGEGPKRVRAAFSLAHRVAPCIIFVDEVDTLLSRRTDANQPGGHEAYDQVKTEFMSQWDG
LLSEAAQLSGVVVMGATNRRQALDPAVLRRFTLQYEVPAPGLPQRRAILLGYLRRHVGPV
EHDLLPPGLMAAEARAALRRRQRQQQKQARQQQPVAASEAAAAAEAREEGAGRVEEGEVS
SDAACSSVSASASDASCDGPEPSSDISTSDVECGAAAGRRGRSSGAGDDTSTSTNTTDAS
RDTLTDPQKRDIKLNTTSTSSSSSGGTLIKGPQQKAHVDSPAAGQTAAAEAAAPATMVTA
DNEPGTEPDAGAEGEAGLPLDAADDHNDDDETGADSDGGSGDDVDAPGLDWLAAATEGLT
GAHLRELCHRAALLVLDEVPEEQLKSLHPDRGGVEVLRALCRHDFEVALRLQSGAPLAG*

Transcript Sequence

Transcript ID

Cre06.g259550.t1.2
Transcript Infomation

pacid=30779794 locus=Cre06.g259550 annot-version=v5.6
Sequence

CAATCGACAGCGCGATGCAAGGAATAGAAGACGAGAAGACGAGATTTGATGCAAATTGCC
TTTCATGAGACAGACAATGACAACTAGGAGAAGAACCTGAAACGCTTTGTACCCATCGGC
GCCATCTGCTCGACGCCGATGTCGTTCCTCGCTGACTTCTGGGAGAAACTTAAGAAAGGA
GATTACAGGGCCATCGACATCGCGTTGACGGCGGCGCTCACGCTGGGCGCAACCATTTCT
ACCGGCATCTCCATTTATGAGGTCTACCTGAAGCGGCAGACCCAGGCTGCCGCACGTGAA
GCCGCCAGCAGCGGTCCAAAGCGAGGCAGGCCACTGCCGGAGAGCCTGATTGCTCTGCAC
GGGCTGCGACCCGAGCAGCTTCAGTTCCTGGACGTGCACGAGGGGCTGATGCTGACGTGT
CTGGTGCCGCCGGGGCAGCTGGCCCTGGCCTCGGGCGAGGTGTACGGCGTGGACGTGGTG
CTGGACGACCTGAAGCGCAAGCTGCTGCGGCCGGTGCAGCTGCGCGACTGGTACAGCCGC
GGCCTGTGGCGCCTGCCCAAGGGCGTGCTGCTGTACGGACCGTCAGGCACTGGCAAGACG
TCGCTCGCCAAGGTGATCGCCAAGGCCGGCCAGTTCCGGTTCCTGCACCTGAGCGCCGCG
GCCATCAGCGACAAGTGGATCGGCGAGGGGCCCAAGCGCGTGCGGGCCGCGTTCAGCCTG
GCGCACAGGGTGGCGCCCTGCATCATATTCgtggACGAGGTGGACACGCTGCTGTCGCGG
CGCACCGACGCCAACCAGCCGGGCGGACACGAGGCCTACGACCAAGTCAAGACCGAGTTC
ATGTCGCAGTGGGACGGCCTGCTGAGTGAGGCGGCGCAGCTGAGCGGGGTGGTGGTGATG
GGCGCAACCAACCGGCGGCAGGCGCTGGACCCAGCCGTGCTGCGCCGCTTCACCCTGCAG
TACGAGGTCCCGGCTCCCGGACTGCCCCAACGCCGGGCCATCCTGCTGGGCTACCTGCGC
CGCCACGTCGGACCCGTGGAGCACGACCTGCTGCCGCCGGGGCTCATggcggcggaggcg
cgggcggcactgcgccgccggcagcggcagcagcagaagcaggcccggcagcagcagccg
gtggcggcgtcagaggcggcggcggcggcagaggcgCGGGAAGAGGGGGCGGGGCGTGTG
GAGGAGGGAGAGGTGTCGTCCGATGCCGCCTGCTCCAGCGTCAGCGCCAGCGCCAGTGAC
GCCTCGTGCGACGGGCCCGAACCGAGTAGTGACATCAGCACCAGCGATGTGGAGTGTGGT
GCGGCCGCTGGCAGGAGGGGCCGCAGCTCGGGCGCAGGTGACGACACCAGCACCAGCACA
AACACAACCGATGCCAGCAGAGACACGCTCACGGACCCTCAGAAGCGCGACATCAAACTC
AACACCACCAGCACGAGCAGTAGCAGCAGTGGCGGCACCCTCATCAAAGGCCCCCAACAG
AAGGCTCACGTGGACTCACCAGCTGCGGGGCAAACAGCGGCTGCGGAGGCGGCGGCACCG
GCGACCATGGTGACAGCAGACAACGAGCCCGGCACCGAGCCTGACGCCGGGGCAGAGGGG
GAAGCGGGATTGCCGCTGGACGCTGCCGATGATCACAATGACGACGATGAGACGGGTGCT
GACAGTGATGGCGGAAGCGGCGATGACGTTGACGCGCCCGGTCTGGACTGGCTGGCTGCG
GCGACGGAGGGCCTCACGGGGGCCCACCTGCGGGAGCTGTGCCACCGCGCGGCGCTGCTG
GTGCTGGATGAGGTGCCCGAGGAGCAGCTCAAGAGCTTGCACCCGGACCGGGGCGGCGTG
GAAGTGCTGCGGGCGCTCTGTCGGCACGACTTTGAAGTGGCGCTGCGGCTGCAGAGCGGC
GCACCTCTGGCGGGGTGATGGCAGCTTCCGGGCTGGTAGCGGCATTTCGCGTGGGCACAT
CCGCATTTGAATGCGACATTACGCAAAGGCGTACCGTATGGGCAACATACAGGGCAGGGA
AATGACGCGGATGGGGCACCGTACGAAACGTATGCCGCACAACCGAGTGCGGCCGTTACG
GTGCGCGATCCATTTCTGCATTTGCTTGTGTGGGAGGCAGAGGTCAAGAGCTGCCTGTCT
GCTTGGTACGTATATACTGCTGGCAGCGACAGTTTCGCTTTGTAGGACTACTGGGATACA
GACTACAGAGACAGGTGGCATGATAGCCCCGGTAGAGAGGTGCACGGCTGTTGCAGTCAC
TGTGACGACACGGATGACACGGGCACGGGGGACGGTCAACTTTCATACGGAAACCATCTG
GAGGCAATAACCCATAGCCCGGTAATGCTCCACGCACCCTCGCGCACGCGACGACTGTCA
AGCACTTCAGAAGCTTGTCAAGGAAACGGTCCATGCATGGGGTTGGTTGGGTCCGGAACG
TTGGTGGGTCGGGAATCGCATGTTACGGCCTGGCGTCCAGCGTTGTTCATGCACGGCACG
ACGGGGGAACGGCGGTATCCGTCACCATAGCACACTCTTGCCTTATAGCCACAGGATGCA
CAACGCGCAATTGATGCAGATGAATAAGCTGTAACGAAAGCAGTGC