Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre05.g233900.t1.2
CDS Infomation

pacid=30783103 polypeptide=Cre05.g233900.t1.2 locus=Cre05.g233900 ID=Cre05.g233900.t1.2.v5.5 annot-version=v5.6
Sequence

ATGCAGGTCGCTTTTAAGTCATCGAGCACGGTGCAGCGCTCGGGCGCGCGGTCGAGCACC
CGGCGCTCCGTCCTGCGCGTTGTTGCGCAAGCGGGCCCTGTTTCTCGCCGCGACCTGCTG
AGCGTTGCCCTGGTCGCTGGTGCCGCCCCACTGGTGCTGGGCGCCCAGCCCGCCTCCGCC
GCTCCGCTGCCGGTGACCCAGATGCCTGTGGAGCAGCTGGGCCTGCTGCAGAAGCAGGCG
CAGCTCAAGGAGTTCCGCACCCGTGCGGAGGCCGCTATCAAGGAGGTTGTGACCACCGAG
GACGGCCCCCTCTGTGTGCGCCTGGTGCTCAACGACGCCGCGGACTGGGACCCCGTGACC
AAGACTGGCGGCGTCAACGGCTCCATCGTGACCCCTGAGGCGCTGGCCCGCCCCGAGAAC
GCCGGCCTGGAGGTGGTGGTGGCCAAGCTGGCCAAGGCCAAGGCCAAGATCGACGCCGCC
GGCGCCGAGGACGGCGCCGGCCCCATCTCCTGGGCGGACCTGATCGTGCTGGCGGCCAAG
GTGACTACCCAGTCCGGCTGGTCTGCCACCAAGGTGTCTCGCGCTCAGATTGCTAGCGGC
GGCGAGGTGATTGCCGGGCCCGCCTTCTCGGCTGCCTGGCCTGTGCGCCTGGGCCGTGTG
GACAGCCCCGCGGCCGCGGCCGTCAAGGTGCCCACCTACGACTCGCCCGTGGCGGAGATC
AAGGCCTTCGCTGCCACCCTGGGCGCTAAGCCCGGTGCCAGCAGCGGCTTCCTGGCCGCC
AAGCCGCCGATTTGGGAGCGCCCCGCCTTCGTGCTGTGGACCGCTGGCGCCGCCAACCCG
GCTGTGGAGGAGGCGCGCTGGGTGAGCGAGGACCCCGCCACCTTCAAGAGCGTCAAGGAG
ATGTACGACCGCTCCCGGCGCACCGTGACCCGCACTGACTACGAGGTGGACTTCGTGGAC
TACTTCACGCTGCTCACTTCCTTCGCCACCTTCAAGCCCGACGCCTACCTGCACCCCGAG
GCCGTGACCGCCATCCGGTTCTAA

Peptide Sequence

PEP ID

Cre05.g233900.t1.2
PEP Infomation

pacid=30783103 transcript=Cre05.g233900.t1.2 locus=Cre05.g233900 ID=Cre05.g233900.t1.2.v5.5 annot-version=v5.6
Sequence

MQVAFKSSSTVQRSGARSSTRRSVLRVVAQAGPVSRRDLLSVALVAGAAPLVLGAQPASA
APLPVTQMPVEQLGLLQKQAQLKEFRTRAEAAIKEVVTTEDGPLCVRLVLNDAADWDPVT
KTGGVNGSIVTPEALARPENAGLEVVVAKLAKAKAKIDAAGAEDGAGPISWADLIVLAAK
VTTQSGWSATKVSRAQIASGGEVIAGPAFSAAWPVRLGRVDSPAAAAVKVPTYDSPVAEI
KAFAATLGAKPGASSGFLAAKPPIWERPAFVLWTAGAANPAVEEARWVSEDPATFKSVKE
MYDRSRRTVTRTDYEVDFVDYFTLLTSFATFKPDAYLHPEAVTAIRF*

Transcript Sequence

Transcript ID

Cre05.g233900.t1.2
Transcript Infomation

pacid=30783103 locus=Cre05.g233900 annot-version=v5.6
Sequence

TACATCCACATCACCTCCTCCATTGCCAGGCAGGCCAGCGCGTGCCTACCTCCGACAACC
AACACCACATCCCTCCACATCTGAGGCAAGACAGCCGCACTGAGCAAAAATGCAGGTCGC
TTTTAAGTCATCGAGCACGGTGCAGCGCTCGGGCGCGCGGTCGAGCACCCGGCGCTCCGT
CCTGCGCGTTGTTGCGCAAGCGGGCCCTGTTTCTCGCCGCGACCTGCTGAGCGTTGCCCT
GGTCGCTGGTGCCGCCCCACTGGTGCTGGGCGCCCAGCCCGCCTCCGCCGCTCCGCTGCC
GGTGACCCAGATGCCTGTGGAGCAGCTGGGCCTGCTGCAGAAGCAGGCGCAGCTCAAGGA
GTTCCGCACCCGTGCGGAGGCCGCTATCAAGGAGGTTGTGACCACCGAGGACGGCCCCCT
CTGTGTGCGCCTGGTGCTCAACGACGCCGCGGACTGGGACCCCGTGACCAAGACTGGCGG
CGTCAACGGCTCCATCGTGACCCCTGAGGCGCTGGCCCGCCCCGAGAACGCCGGCCTGGA
GGTGGTGGTGGCCAAGCTGGCCAAGGCCAAGGCCAAGATCGACGCCGCCGGCGCCGAGGA
CGGCGCCGGCCCCATCTCCTGGGCGGACCTGATCGTGCTGGCGGCCAAGGTGACTACCCA
GTCCGGCTGGTCTGCCACCAAGGTGTCTCGCGCTCAGATTGCTAGCGGCGGCGAGGTGAT
TGCCGGGCCCGCCTTCTCGGCTGCCTGGCCTGTGCGCCTGGGCCGTGTGGACAGCCCCGC
GGCCGCGGCCGTCAAGGTGCCCACCTACGACTCGCCCGTGGCGGAGATCAAGGCCTTCGC
TGCCACCCTGGGCGCTAAGCCCGGTGCCAGCAGCGGCTTCCTGGCCGCCAAGCCGCCGAT
TTGGGAGCGCCCCGCCTTCGTGCTGTGGACCGCTGGCGCCGCCAACCCGGCTGTGGAGGA
GGCGCGCTGGGTGAGCGAGGACCCCGCCACCTTCAAGAGCGTCAAGGAGATGTACGACCG
CTCCCGGCGCACCGTGACCCGCACTGACTACGAGGTGGACTTCGTGGACTACTTCACGCT
GCTCACTTCCTTCGCCACCTTCAAGCCCGACGCCTACCTGCACCCCGAGGCCGTGACCGC
CATCCGGTTCTAAGCAGCAGCAGACACGCATGTGACGTGCTTGACTTGACGAGCAGCCTC
GTCCGTGGTACCCACGCTATCTGAACACAAACATTGGATTTTGCGGACGTGCCGAGGAGG
AGCTTAGGAGGGCGCACGGCGTGAGTGCGGTGGGATCGGGTGCTCGTAACGTCGTACGTG
TTGCATGCACGCATTTTGGGTGAGCGCTTGTGGCACGACACGATAGATGAGCGTGAATCA
TTTTTTGTCAAGAGACcggtccgtgcgtccacccaaccggccacgtcatgatttgcgggg
atgccaaaggcccccaacatagaggcgtgtgcaatttgcgtgtgcttagtaggcgcccgc
gtcaaggtggctgggttgataacgacccgggaggggagggctcagcccttttcctgcctc
cctaaggcagccacctccttgttgtcaagagAGACGTTTGTGCAGAGTGTTCGGGCAAGG
TGCTCCGATTTTGAGCGAGTTGTGGCCCCCATGCATGACGGGGTGAGCGCGGGAATCCCC
TGATGCGCTAGGTCGCCTGAAACAAGGTAGCCGTGCGGTGTCGACACGGCTGCTGAAGGC
CTGCTGTCCCCAGCTGCCCAATGCAGCTCTCAAGGTACTGCGGGCCTGCGATCGTGAGAT
AAATGGGATGCATTGCCGTTTCACGTTGGGCACTGCATGCATTCCGTGTGTGTGGAAGCG
CTGAACGGACAGCCACAGGTGCTGGGGTACACGAGTACGCCAGTATGACCGGCTCTTAGA
ATGATTCCCGTCCAGGACCCTACGCCGACGTGCGCACGTGATCCTCGCATCATAGGCAGC
CCGCCTAATTTCTTCACCCTCACAGCCGCCAGAAGGGCGTGACAGGTCAACGCTGCACCG
TACACAGCTCTGCTTGCCGCGTCTGCACGCAAAGCAATGCCCTTTCTGCCCGCCCGCCCA
CGCCTACGACAGCATGCATTGCAGGGTGGCAGCAAGCCAGCCCGGCCAGCCCGCTATCCA
GTCGCCACCATCACTCATCAGGGTTCTCCCCCCCAAACAAATGAATGCAGGCGCCCCGAT
TGCAGCACTCAGTCATCGGAAGTACCGGTACGAAGGAATCAACACACCCTCATCTGTGCG
TATGCATGTGGATCACCATCGCGGGATTCCTCATCTCTGCAGACCACTTCGGGCCT