Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre04.g227900.t1.2
CDS Infomation

pacid=30791439 polypeptide=Cre04.g227900.t1.2 locus=Cre04.g227900 ID=Cre04.g227900.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCCGCTGCCGGGCTGGATACCCTGCGCCTGGAGGATTCAGATGACGATTTTAAATAT
GAGGAGGTGGATGTGATGAGCGACGGGGAGGATGATGCGAGCGAGGACTTGGACGCGGCT
CTTCGGAAACTCCAGCAGTTTACAAGCAAGCAAGAAGCGGCGACCGGGCCAGCACGGACT
ACGGAGGTAAAACCGGGGCAAGTGGTGAAGAAGCCGGAGGTCATTGATGACTTCCTGCGC
AACTTCTTCATCAAAATGGGGCTGTCGCGGACGTGCGAGTGTTTCGAGGCTGAGTGGTAC
GAGCTCAAAGCCACGGGGCGGCTGGACAACAGCACCACCGTGCCGGACGTGTACCTTCGC
AACGCGGAGCTGGAGGACGATGTGGCGGGCCTGCGGCGCGAGCTGGCGGAGGCCAAGTCC
ATTGCGGGCCGCGCCTCCGCCACCTGGGACAAGTTCCGCAAGGAGCGCGACTTCCACCGC
ATGCACCACAAGCGGGTGGCGCAGGAGAAGAACAAGCTGTTGACTGACCTGCGGCGGCTC
AAGGAGCACTACGCCAAGTATGAGCCGACCATCCTGGAGCTGAAGAAGAAGTACGAGACC
CTGATGAAGGAGAAGATGATGATGAGCCTGGAGCGGGACAAGCTGGCGGCGCGGGTGGAC
GCACTGGAGCAGGTGGCGTCCTCGCCCCTACCCGGCGCGGAGCGGTCCTTGGGCGGCCAG
TCCACAGCCGCAGCCGGTGGCGGCGCCTCCGGCCGCGCCCTGGGCGCCACCAACGGCGCA
CTCACAGGCGACGTGCCGCCTGCCGCCGGGGCGGCGGCGGCGGCCGCCACGGGCCGGTCG
GGTGCGGTGTCGGCGGGTCCGCGGAGCGGTTGGGCGTCGTTGAACGCGCCGCCGCGGCGC
AACCCGTACGCGGACCTTGAGTTCCCGGCGGCTCCTGTGAAGATGCTATCGCTCAACAAG
ACGTTCAAGGGCCACCTGCTGTCGGTGGCCAACCTGGCGCTGCACCCCACCAAGCCCATC
CTGGTCACCGCCTCGGACGACAAGACCTGGAAGATGTGGCACATGCCAGGTGCGGCCGGC
GGGCGGGTGCAGGCGGCTGGGTGGTGCAAGGAGACCTACTACGGGCACCAGAACAGCTGC
AACGGCGTGAGCTTCAACATCCTGGGCACCCAGCTGGCCAGCACGGACGCGGACGGAGTG
GTGAAACTGTGGGACACACGCATGACCGCCGAGGTCGCCACCATCAATACCGGCAAGCAC
CCCGCCAACAAGTCCTGCTTCGACCGCTCCGGTCAGGTACTGGCGGTGGCGTGCGACGAC
GGCAAGGTCAAGGCCTACAGCACCACAGACGGAGTGCTGCAGGCGGAGCTGGCGGGCCAC
GAGGACGCGGTGCAGGCGGTGCTGTTCGACCCGGCGGGTCAGTACCTGGTCAGCTGCGGC
TCAGACAACACCTTCCGCCTGTGGTCGTGA

Peptide Sequence

PEP ID

Cre04.g227900.t1.2
PEP Infomation

pacid=30791439 transcript=Cre04.g227900.t1.2 locus=Cre04.g227900 ID=Cre04.g227900.t1.2.v5.5 annot-version=v5.6
Sequence

MAAAGLDTLRLEDSDDDFKYEEVDVMSDGEDDASEDLDAALRKLQQFTSKQEAATGPART
TEVKPGQVVKKPEVIDDFLRNFFIKMGLSRTCECFEAEWYELKATGRLDNSTTVPDVYLR
NAELEDDVAGLRRELAEAKSIAGRASATWDKFRKERDFHRMHHKRVAQEKNKLLTDLRRL
KEHYAKYEPTILELKKKYETLMKEKMMMSLERDKLAARVDALEQVASSPLPGAERSLGGQ
STAAAGGGASGRALGATNGALTGDVPPAAGAAAAAATGRSGAVSAGPRSGWASLNAPPRR
NPYADLEFPAAPVKMLSLNKTFKGHLLSVANLALHPTKPILVTASDDKTWKMWHMPGAAG
GRVQAAGWCKETYYGHQNSCNGVSFNILGTQLASTDADGVVKLWDTRMTAEVATINTGKH
PANKSCFDRSGQVLAVACDDGKVKAYSTTDGVLQAELAGHEDAVQAVLFDPAGQYLVSCG
SDNTFRLWS*

Transcript Sequence

Transcript ID

Cre04.g227900.t1.2
Transcript Infomation

pacid=30791439 locus=Cre04.g227900 annot-version=v5.6
Sequence

GCTTTAACAAAAACAGACCTCAAAGGCATTTTGTGACGTCCTTGCCTGTTTCCATAGAAG
CGCTTGTGGTCTGGCCAAACATGCTATTCATGAGCATCCAACGATAGGTAATAGGTAATA
GCTTCCATTATAGCACTGAAATAGAGCGCAGCGGCACAGCGGGCGAGGATGGCCGCTGCC
GGGCTGGATACCCTGCGCCTGGAGGATTCAGATGACGATTTTAAATATGAGGAGGTGGAT
GTGATGAGCGACGGGGAGGATGATGCGAGCGAGGACTTGGACGCGGCTCTTCGGAAACTC
CAGCAGTTTACAAGCAAGCAAGAAGCGGCGACCGGGCCAGCACGGACTACGGAGGTAAAA
CCGGGGCAAGTGGTGAAGAAGCCGGAGGTCATTGATGACTTCCTGCGCAACTTCTTCATC
AAAATGGGGCTGTCGCGGACGTGCGAGTGTTTCGAGGCTGAGTGGTACGAGCTCAAAGCC
ACGGGGCGGCTGGACAACAGCACCACCGTGCCGGACGTGTACCTTCGCAACGCGGAGCTG
GAGGACGATGTGGCGGGCCTGCGGCGCGAGCTGGCGGAGGCCAAGTCCATTGCGGGCCGC
GCCTCCGCCACCTGGGACAAGTTCCGCAAGGAGCGCGACTTCCACCGCATGCACCACAAG
CGGGTGGCGCAGGAGAAGAACAAGCTGTTGACTGACCTGCGGCGGCTCAAGGAGCACTAC
GCCAAGTATGAGCCGACCATCCTGGAGCTGAAGAAGAAGTACGAGACCCTGATGAAGGAG
AAGATGATGATGAGCCTGGAGCGGGACAAGCTGGCGGCGCGGGTGGACGCACTGGAGCAG
GTGGCGTCCTCGCCCCTACCCGGCGCGGAGCGGTCCTTGGGCGGCCAGTCCACAGCCGCA
GCCGGTGGCGGCGCCTCCGGCCGCGCCCTGGGCGCCACCAACGGCGCACTCACAGGCGAC
GTGCCGCCTgccgccggggcggcggcggcggccgccacgggccggTCGGGTGCGGTGTCG
GCGGGTCCGCGGAGCGGTTGGGCGTCGTTGAACGCGCCGCCGCGGCGCAACCCGTACGCG
GACCTTGAGTTCCCGGCGGCTCCTGTGAAGATGCTATCGCTCAACAAGACGTTCAAGGGC
CACCTGCTGTCGGTGGCCAACCTGGCGCTGCACCCCACCAAGCCCATCCTGGTCACCGCC
TCGGACGACAAGACCTGGAAGATGTGGCACATGCCAGGTGCGGCCGGCGGGCGGGTGCAG
GCGGCTGGGTGGTGCAAggagACCTACTACGGGCACCAGAACAGCTGCAACGGCGTGAGC
TTCAACATCCTGGGCACCCAGCTGGCCAGCACGGACGCGGACGGAGTGGTGAAACTGTGG
GACACACGCATGACCGCCGAGGTCGCCACCATCAATACCGGCAAGCACCCCGCCAACAAG
TCCTGCTTCGACCGCTCCGGTCAGGTACTGGCGGTGGCGTGCGACGACGGCAAGGTCAAG
GCCTACAGCACCACAGACGGAGTGCTGCAgGCGGAGCTGGCGGGCCACGAGGACGCGGTG
CAGGCGGTGCTGTTCGACCCGGCGGGTCAGTACCTGGTCAGCTGCGGCTCAGACAACACC
TTCCGCCTGTGGTCGTgaggaggggagcgggaggaggacgaggaggaggagggtggtgga
ggagggtagtggaggagaaggaggaggaggGTGGTAGAGAGAAACTGGCGTTGTCTCTCC
GTTCCCTTGCGCGGAAGGAGGGAGGGCAAGGGTGGAAGGTCGGAAGACGGTTGAAGGGCG
CGCGACCCGACGGCAGCCTCAGCCTTAGGCGTGCTGCTGCTAGCGGGAAGTGTGCAAGGC
AGGGACCCCGGTCCTCTGCTACCCTGGACTCTGCCGCGGGCAAGCCGTGGGGAGCAGGGG
AGGCTGCTGGTCTGCAGGCTCGGGGTAAGGGGGCTAGGAGAGTGTCGTGCAAACAACATG
TCTGCGGGATGCAGAGGGCTGTAAGATTGCTTGTGATCAACGTAATCTTCCATGGGCGTG
GGTCATGGGCGGTTTGGTGTGTCCGTTTGAGGTGTTGGAAACTGTGAGTTTGGTGATTGC
GTTTGCGCGTGCGGCAATGGGTGCATACCGGTGATGTACCTGTAAGATGGGGGCCAGCAT
GTAGCCCGCGCCACGGGGCATCCTGCTGCAAGGACCTACCCAGGGGTGAGCTGCTTTCCT
GTGGTGTCGCATGGGCCCAACTTCCGACTACCAGCTACGTGTGGGCGGTGTGTGTTTGGG
CACACGGTGCGAAGGCACGTTCACGGTGAATACGTGTGTAATGACGGCATCCA