Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre04.g223300.t1.2
CDS Infomation

pacid=30791132 polypeptide=Cre04.g223300.t1.2 locus=Cre04.g223300 ID=Cre04.g223300.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCATCCGACGCTATGACTATCAACGAGTCGCTGATGGAGGTGGAGCACACTCCCGCC
GTCCACAAGCGCATTCTGGATATCCTGCCCGGCATTTCAGGCGGTGTGGCCCGTGTCATG
ATCGGCCAGCCCTTTGACACCATCAAGGTGCGGCTGCAAGTGCTGGGTCAGGGCACTGCC
CTGGCGGCCAAGCTGCCGCCGTCGGAGGTGTACAAGGACTCGATGGACTGCATCCGCAAG
ATGATCAAGAGCGAGGGCCCGCTGTCCTTCTACAAGGGCACCGTCGCGCCCCTGGTCGGC
AACATGGTCCTGCTGGGCATCCACTTCCCCGTCTTCTCGGCCGTGCGAAAGCAGCTGGAG
GGTGATGACCACTACTCCAACTTCTCCCACGCCAACGTCCTGCTGTCGGGCGCGGCTGCC
GGTGCCGCCGGTTCTCTGATCTCTGCCCCCGTGGAGCTGGTCCGCACCAAGATGCAGATG
CAGCGCCGCGCCGCTCTGGCTGGCACGGTGGCCGCCGGCGCCGCCGCCTCGGCTGGCGCC
GAGGAGTTCTACAAGGGCTCGCTGGACTGCTTCAAGCAGGTCATGTCCAAGCACGGCATC
AAGGGCCTGTACCGTGGTTTCACCTCCACCATCCTGCGTGACATGCAGGGCTACGCCTGG
TTCTTCCTGGGCTACGAGGCCACTGTCAACCACTTCCTGCAGAACGCCGGCCCCGGTGTG
CACACCAAGGCCGACCTCAACTACCTGCAGGTCATGGCCGCCGGCGTGGTGGCGGGCTTC
GGCCTGTGGGGCTCCATGTTCCCCATCGACACCATCAAGTCCAAGCTGCAGGCCGACTCC
TTCGCCAAGCCCCAGTACTCGTCCACGATGGACTGCCTCAAGAAGGTGCTGGCGAGCGAG
GGCCAGGCGGGTCTGTGGCGCGGCTTCTCCGCCGCCATGTACCGCGCCATCCCCGTCAAC
GCCGGCATCTTCCTGGCGGTGGAGGGCACGCGCCAGGGCATCAAGTGGTACGAGGAGAAC
GTGGAGCACATCTACGGCGGCGTGATCGGCCCCGCCACGCCCACCGCCGCGCAGTAA

Peptide Sequence

PEP ID

Cre04.g223300.t1.2
PEP Infomation

pacid=30791132 transcript=Cre04.g223300.t1.2 locus=Cre04.g223300 ID=Cre04.g223300.t1.2.v5.5 annot-version=v5.6
Sequence

MSSDAMTINESLMEVEHTPAVHKRILDILPGISGGVARVMIGQPFDTIKVRLQVLGQGTA
LAAKLPPSEVYKDSMDCIRKMIKSEGPLSFYKGTVAPLVGNMVLLGIHFPVFSAVRKQLE
GDDHYSNFSHANVLLSGAAAGAAGSLISAPVELVRTKMQMQRRAALAGTVAAGAAASAGA
EEFYKGSLDCFKQVMSKHGIKGLYRGFTSTILRDMQGYAWFFLGYEATVNHFLQNAGPGV
HTKADLNYLQVMAAGVVAGFGLWGSMFPIDTIKSKLQADSFAKPQYSSTMDCLKKVLASE
GQAGLWRGFSAAMYRAIPVNAGIFLAVEGTRQGIKWYEENVEHIYGGVIGPATPTAAQ*

Transcript Sequence

Transcript ID

Cre04.g223300.t1.2
Transcript Infomation

pacid=30791132 locus=Cre04.g223300 annot-version=v5.6
Sequence

GTCTATTCCTCGTGCCAAGGCACTTTCTCCGGAAGCGCACCCACCTCTCCGCGCCGCTCG
CCTTCACGCGTGCTCTCAGCTCAACACCACTGTAACTCAGGCCTTGACGGGCTTGTTTTA
TCAAAACCAGCAAGAATGTCATCCGACGCTATGACTATCAACGAGTCGCTGATGGAGGTG
GAGCACACTCCCGCCGTCCACAAGCGCATTCTGGATATCCTGCCCGGCATTTCAGGCGGT
GTGGCCCGTGTCATGATCGGCCAGCCCTTTGACACCATCAAGGTGCGGCTGCAAGTGCTG
GGTCAGGGCACTGCCCTGGCGGCCAAGCTGCCGCCGTCGGAGGTGTACAAGGACTCGATG
GACTGCATCCGCAAGATGATCAAGAGCGAGGGCCCGCTGTCCTTCTACAAGGGCACCGTC
GCGCCCCTGGTCGGCAACATGGTCCTGCTGGGCATCCACTTCCCCGTCTTCTCGGCCGTG
CGAAAGCAGCTGGAGGGTGATGACCACTACTCCAACTTCTCCCACGCCAACGTCCTGCTG
TCGGGCGCGGCTGCCGGTGCCGCCGGTTCTCTGATCTCTGCCCCCGTGGAGCTGGTCCGC
ACCAAGATGCAGATGCAGCGCCGCGCCGCTCTGGCTGGCACGGTGGCCGCCGGCGCCGCC
GCCTCGGCTGGCGCCGAGGAGTTCTACAAGGGCTCGCTGGACTGCTTCAAGCAGGTCATG
TCCAAGCACGGCATCAAGGGCCTGTACCGTGGTTTCACCTCCACCATCCTGCGTGACATG
CAGGGCTACGCCTGGTTCTTCCTGGGCTACGAGGCCACTGTCAACCACTTCCTGCAGAAC
GCCGGCCCCGGTGTGCACACCAAGGCCGACCTCAACTACCTGCAGGTCATGGCCGCCGGC
GTGGTGGCGGGCTTCGGCCTGTGGGGCTCCATGTTCCCCATCGACACCATCAAGTCCAAG
CTGCAGGCCGACTCCTTCGCCAAGCCCCAGTACTCGTCCACGATGGACTGCCTCAAGAAG
GTGCTGGCGAGCGAGGGCCAGGCGGGTCTGTGGCGCGGCTTCTCCGCCGCCATGTACCGC
GCCATCCCCGTCAACGCCGGCATCTTCCTGGCGGTGGAGGGCACGCGCCAGGGCATCAAG
TGGTACGAGGAGAACGTGGAGCACATCTACGGCGGCGTGATCGGCCCCGCCACGCCCACC
GCCGCGCAGTAAATGTGGCCGCGGCTGCGGCTACGTGCTTGAGCGCCCGCGTGTGCTCTA
TCTAGCTGCTGCAACAGCTGCTGTTGCGCACGCGGCGCAAGGCGCAACCTCCTGGCATGA
CAACATGGCTCAAAAGGTGTCACgtgtgtgtgtgtgtgtgtatgtttgtgtgtgcgtgtg
GAGAGTCTGGCATAGGTAGATGTGGTCGTTAGCTTTCTGCTTCGTTCCCCATCGTGAGGC
GCATACATGCGGCAACAAGCCAGTGGATGCACTCTGGGCAGAACGTGCGTGTGTGCTCGT
TTTTCCTAGCTTAGTGGTGGCAGCAGCGGCAACAGAAAGAGGTAGGCAGAAGCAGGAGCG
GTCGAGGGAACAGGACAGCTGCTGAATACAAAGGCGTCAGACCTGAACGTAATTTTGTGC
GGGCACCATACCCCGCTTACGGTCCAAGGGCATGATGCCTTTTTGATGCACACATCACCC
CTCCCCGCGCATGTATGTTAAATGATGATTTTGACTGCTGTTTTTGAGAGCGGAACAAGG
GGAACTGCAGTACTGGCTCGGACATGAGAGGAGAGGCCGGCGAGAGAGGCTCATGACAAA
AAGTGGAATGGGCTTGCAGATGTATATAGCAGGGCAAACTGGCAAAAGGAGCGATACCTT
TCGTAAGCACAGGGCTGAGGTGCATGGTCGTGGAAGGTCACGGGAGTTGAGCCGCTACAC
CGGCTGTCAGTGCTGGTCTGTTTCTCCATCGGGAAACGCGGGTCAATATGTAATCGTGAT
GGGTT