Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre04.g214050.t1.2
CDS Infomation

pacid=30791541 polypeptide=Cre04.g214050.t1.2 locus=Cre04.g214050 ID=Cre04.g214050.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGCTCTACAAAATGCTTGGCAAAACACGAAGGAGCGTGCCCGCGAGACCTGGGCGCAA
CTCACCTGGTCCGAGGTGTCTGGCTCGCTGGGCGACCTGGGCACGTTCCTTCCTTTGCTG
ATCGGCCTGGTTCAGAAGGTCCATCTGGACCTGGGGACGACCCTTACTATTACAGGTCTG
TACAACATCATCAGTGGGTGGCAGTTCCGCATCCCCATGTGCGTGCAGCCGATGAAGACC
ATTGCCGCGGTGGCGCTGGCGGGCGGAGCGGCCGGTCTGGATCTGCCTCAGCTGCTGCAC
GCGGGCCTGTTCGTGGCGGGCTGTGTGGGGCTGTTGGGTGCCAGCCAGGCCATCGACCTG
TTCAACTGGCTGGTGCCGCCACCCGTCATCCGCGGCGTGCAGCTGGCGGTGGGCGTCAAG
CTGGCCATGAAGGGTGTAGACATGGCGTTGCGGCTGCACGGCGGCCCCTCCAGCGGCTGG
CGGCCGTGGCTGGGCACTGAGGGGCTGGTGGTGGGGGCGGTGGCGCTGGCGGCTATGATC
GCGACCACCCTGCCGCCGCGTGCCGCCCGCCGCGGCACCCTGGAAGCGGCCGATGAGGGC
GGTCTGGGCCCCCGCCCCACTGACACCGCCTTCGAGCCGCTGCTGCGCCGCCTGCCCGCC
TGTTGCGGCGGCGGCGACCGCGCCCCGCAAGTGGAGGGCGCCGCCGTCAGCGCGGAGCGG
GCGGGGCTGCTGGCGCACGCGGAGGGCGGCGAGCGCAGCGGCAACCTGGATGACGGCACG
GAGGCGGGCGTGGGCGCTGCGGCTGGAGGTGGAGGGTGTGGCGGAGGTGGAGGCGGCGGC
AGGATCCCCAGCGCGCTCATTGCGGTGGTGGTGGGCCTAGCGATGGCGGTGCTGCACCGG
CCGGGGCTGGTGTGGGAGCTGCGGCTGGGTCCCACATTGCCGCGCCTGCTGCGGCCCTCC
TGGCCCGACTTCAAGACCGGCGCGCTGCGGGGCGGGCTGCCGCAGCTGCCGCTGACCACG
CTCAACTCCGTCATCGCCGTGACACAGCTCGCTAACGCGCTCTTCGGCGACAAGCCGGAG
GCGGAGCGGCGGCGCTGGCGGCCCTCTGCGGTGGCGCTGTCAGTGGCGCTTCTGAATGGC
GCGGGCGTGTGGCTGGGAGCCATGCCCTGTTGCCACGGCGCAGGCGGGCTGGCGGCCCAG
TACAAGTTCGGCGCGCGCACGGGCCACGCGCCCATCCTGCTGGGCTGCATCAAGGCAGCT
CTGGGGCTGCTGTTTGGGGGCAGTCTGGTGGTTCTTCTGGAGGCATTCCCGCAGCCGCTG
CTGGGCGCGCTGCTGACTGTGTCCGGCATTGAGCTGGCGTCCGTTGTGCGCCACACGCGG
TCTCCCCGCGGCTACACCTTTGCGCTGCTGACGGCCGTTGCCATCCTGGCCCTGGACAAC
ACCGGCACCGGCTTCCTAGTGGGGCTGGTAGGAGTGGCGGCTGTAGCAGCCTACGAGGGC
GCAGTAGCAGCTGCGGCCGCTCGTTGGCCGCGGGTCTTTGCTCGCGGTGGCAGGGCGTGA

Peptide Sequence

PEP ID

Cre04.g214050.t1.2
PEP Infomation

pacid=30791541 transcript=Cre04.g214050.t1.2 locus=Cre04.g214050 ID=Cre04.g214050.t1.2.v5.5 annot-version=v5.6
Sequence

MALQNAWQNTKERARETWAQLTWSEVSGSLGDLGTFLPLLIGLVQKVHLDLGTTLTITGL
YNIISGWQFRIPMCVQPMKTIAAVALAGGAAGLDLPQLLHAGLFVAGCVGLLGASQAIDL
FNWLVPPPVIRGVQLAVGVKLAMKGVDMALRLHGGPSSGWRPWLGTEGLVVGAVALAAMI
ATTLPPRAARRGTLEAADEGGLGPRPTDTAFEPLLRRLPACCGGGDRAPQVEGAAVSAER
AGLLAHAEGGERSGNLDDGTEAGVGAAAGGGGCGGGGGGGRIPSALIAVVVGLAMAVLHR
PGLVWELRLGPTLPRLLRPSWPDFKTGALRGGLPQLPLTTLNSVIAVTQLANALFGDKPE
AERRRWRPSAVALSVALLNGAGVWLGAMPCCHGAGGLAAQYKFGARTGHAPILLGCIKAA
LGLLFGGSLVVLLEAFPQPLLGALLTVSGIELASVVRHTRSPRGYTFALLTAVAILALDN
TGTGFLVGLVGVAAVAAYEGAVAAAAARWPRVFARGGRA*

Transcript Sequence

Transcript ID

Cre04.g214050.t1.2
Transcript Infomation

pacid=30791541 locus=Cre04.g214050 annot-version=v5.6
Sequence

GAATGCGGATTATCATTAGTTAATGTGAGGATCATGGCTCTACAAAATGCTTGGCAAAAC
ACGAAGGAGCGTGCCCGCGAGACCTGGGCGCAACTCACCTGGTCCGAGGTGTCTGGCTCG
CTGGGCGACCTGGGCACGTTCCTTCCTTTGCTGATCGGCCTGGTTCAGAAGGTCCATCTG
GACCTGGGGACGACCCTTACTATTACAGGTCTGTACAACATCATCAGTGGGTGGCAGTTC
CGCATCCCCATGTGCGTGCAGCCGATGAAGACCATTGCCGCGGTGGCGCTGGCGGGCGGA
GCGGCCGGTCTGGATCTGCCTCAGCTGCTGCACGCGGGCCTGTTCGTGGCGGGCTGTGTG
GGGCTGTTGGGTGCCAGCCAGGCCATCGACCTGTTCAACTGGCTGGTGCCGCCACCCGTC
ATCCGCGGCGTGCAGCTGGCGGTGGGCGTCAAGCTGGCCATGAAGGGTGTAGACATGGCG
TTGCGGCTGCACGGCGGCCCCTCCAGCGGCTGGCGGCCGTGGCTGGGCACTGAGGGGCTG
GTGGTGGGGGCGGTGGCGCTGGCGGCTATGATCGCGACCACCCTGCCGCCGCGTGccgcc
cgccgcggcacccTGGAAGCGGCCGATGAGGGCGGTCTGGGCCCCCGCCCCACTGACACC
GCCTTCGAGCCGCTGCTGCGCCGCCTGCCCGCCTGTTGCGGCGGCGGCGACCGCGCCCCG
CAAGTGGAGGGCGCCGCCGTCAGCGCGGAGCGGGCGGGGCTGCTGGCGCACGCGGAGGGC
GGCGAGCGCAGCGGCAACCTGGATGACGGCAcggaggcgggcgtgggcgctgcggctgga
ggtggagggtgtggcggaggtggaggcggcggcaggATCCCCAGCGCGCTCATTGCGGTG
GTGGTGGGCCTAGCGATGGCGGTGCTGCACCGGCCGGGGCTGGTGTGGGAGCTGCGGCTG
GGTCCCACATTGCCGCGCCTGCTGCGGCCCTCCTGGCCCGACTTCAAGACCGGCGCGCTG
CGGGGCGGGCTGCCGCAGCTGCCGCTGACCACGCTCAACTCCGTCATCGCCGTGACACAG
CTCGCTAACGCGCTCTTCGGCGACAAGCCGGAGGCGGAGCGGCGGCGCTGGCGGCCCTCT
GCGGTGGCGCTGTCAGTGGCGCTTCTGAATGGCGCGGGCGTGTGGCTGGGAGCCATGCCC
TGTTGCCACGGCGCAGGCGGGCTGGCGGCCCAGTACAAGTTCGGCGCGCGCACGGGCCAC
GCGCCCATCCTGCTGGGCTGCATCAAGGCAGCTCTGGGGCTGCTGTTTGGGGGCAGTCTG
GTGGTTCTTCTGGAGGCATTCCCGCAGCCGCTGCTGGGCGCGCTGCTGACTGTGTCCGGC
ATTGAGCTGGCGTCCGTTGTGCGCCACACGCGGTCTCCCCGCGGCTACACCTTTGCGCTG
CTGACGGCCGTTGCCATCCTGGCCCTGGACAACACCGGCACCGGCTTCCTAGTGGGGCTG
GTAGGAGTGGCGGCTGTAGCAGCCTACGAGGGCGCAGTAGCAGCTGCGGCCGCTCGTTGG
CCGCGGGTCTTTGCTCGCGGTGGCAGGGCGTGAAAATGAGAGGGGGGGGGGTTCTATGCC
CGTGCCCAGCAACATTGGTCCCAATTGTCAGGGAATTgggggggggggcggggcggggTG
GAGGTCTGGGACTCTGGATGGTGGCGGTTCGATAGTGTACAGCAGGATGACCTACACCAG
GGATTACCTGACAGCAGCGTGGGGGATAGCGCTTGGGTCCGTGTGTTCTGGGAAAGGGAA
GGGTGCGGTGTGCATGGCGCCACATCAGCTACCGCCTTTTCGCAGAGGCGTTGTCGGCAG
AAATGTGACAGAATCGCGGGATTGACTCGTTTGTTGAGTCGGAGCTGCCAGCGGGGATTG
ATTCGTTTGTTGAGTAGTCGAGTACGTAGGAGCCGTCAGCGGCGGGCTTCACGGCGGGGG
CCTGTCATGTTCGGGGTTCTCGTTGCGGTAAGTTCATGGGTCACTGTGGGAGGAAAGGGA
GCCGTTAGGACGGTCCTTGAGTGCATGCAAGAACGGCACGCACTAGAGACGCCACCGAGC
GAACGTAATTGAATGGGGACCAAACAGGGTCCTCCCCAGTTGCCGTCCTGCAGGAGGCAC
CAGATCCCATCTATATATCCAACACACACGTCTAACACCCATGACTTTCAATCGACCGCC
GTGCATCACTGCATCCATCGAACTATGGAAGACCGCAGACCAACCGTTCTCCGTATGACA
GCGCAAACCATGGAATACGGCACATGTAACAAGTAGCCCGC