Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre03.g189950.t1.2
CDS Infomation

pacid=30786610 polypeptide=Cre03.g189950.t1.2 locus=Cre03.g189950 ID=Cre03.g189950.t1.2.v5.5 annot-version=v5.6
Sequence

ATGTCTTCGGACGAGCTTAAGGCCAAGGGAAATGCCGCGTTCAGCGCGGGCAACTTCGAG
GAGGCTGCTAAGTTCTTCACGGAGGCAATTGGCGTGGACCCAGGCAACCACGTCCTCTAC
AGCAACCGCAGCGCGTCGTATGCGAGCCTCAAGCGGTATACCGATGCGCTGGATGACGCA
AAGAAGTGTGTGTCGCTCAAGCCTGACTGGGCCAAGGGCTACAGCCGCCTGGGTGCGGCC
TATCACGGCCTGGGCGAGTACCCCGAGGCCATCCAGGCCTACGAGGACGGCCTGAAGCAC
GACGCCAACAGCGAGCAGCTCAAGAGCGCGCTGGAGGAGGCGCGCGCCGCCGCCGCCGCG
CCGCGCCGCCCCGGCTCCATCTTCTCCTCGCCCGAGCTGCTCATGAAGCTGGCCATGGAC
CCCCGCGGCAAGGCGCTGTTGGGCCAGCCCGACTTTATGGCCATGCTGGGCGACATCCAG
AACGACCCCTCCCGCATCAACATGTACCTCAAGGACCCGCGCATGCAGCTGGTGCTGGAG
CTGGCTCTGGGCGCAAAGTTCGGGGCGCCAGGCGGCGGAGAGGACGAGGAGCCGGCCAGC
GCCACCGCGCACAAGGAGGCTGAGTCACACAAGCCCGCCTCCGCCTCGCACGCACATGAC
AAGAAGCCCGCGCCGCAGCCGGAGCCGGAGCATGCGGAGGTCAGCGAGGAGGAGCGGGAG
GCTGCCGCCAAGAAGGCTGCGGCCCTGAAGGAGAAGGAGCTTGGTAATGAGGCCTACAAG
AAGAAGGAGTTTGAGACGGCCATTGCCCACTACAACAAGGCCATTGAGCTGTACGACGGT
GACATGACCTTCCTCACCAACCGCGCGGCCGTGTTCTTCGAGCAGGGCGAGTTCGACAAG
TGCGTTGCGGACTGCGACGCGGCGGTGGACAAGGGCCGCGAGATGCGCACCGACTTCAAG
GTCATTGCACGCGCACTCACGCGCAAGGGCAATGCGCTCGTCAAGCTCAACAGGCTTGAG
GACGCCATCGCGGCCTACAACAAGTCGCTGATGGAGCACCGCAACGCCGACACCCTGGCG
CTGCTGCACAAGACCGAGAAGACGCTCAAGGAGCGGCGGGAGGCGGACTACATCAACATG
GAGCTGTGCGAGGTGGAGCGGGAAAAGGGCAACACCGCATTCAAGGAGCAGCGCTACCCA
GAGGCTGTGCAAGCCTACCAGGAGGCTCTCAAGCGCGGCCCGCCTGCCGTCAACCCGGAG
GCCTACAAGCTCTACTCCAACCTGGCCGCCTGCTACACAAAGCTGGGCGCCTACCCAGAG
GGCGTCAAGGCCGCGGACAAGTGCATTGAGCTCAAGCCCGACTTCGCCAAGGGCTACAGC
CGCAAGGGCACGCTGCAGTACTTCATGAAGGAGTACGACAAGGCCATTGAGACGTACAAC
AAGGGCCTGGAGCTGGAGCCCGACAGCACCGAGCTGCAGGAGGGGCTGCAGCGCGCCGTG
GAGGCCATCAGCAGGTTCGCGAGCGGCCAGGCCAGTGCGGAGGAGGTCAAGGAGCGCCAG
GCGCGGTCGCTGTCCGACCCCGACATCCAAAACATCCTCAAGGACCCGGTCATGCAGCAG
GTGCTGCGTGACTTCCAGGAGGACCCCCGCGGCGCACAGAAGCACCTCAAGAGCCCCGAG
ATCATGGTCAAGATCAACAAGCTGGTGGCGGCCGGCATCATCCAGGTCAAGTGA

Peptide Sequence

PEP ID

Cre03.g189950.t1.2
PEP Infomation

pacid=30786610 transcript=Cre03.g189950.t1.2 locus=Cre03.g189950 ID=Cre03.g189950.t1.2.v5.5 annot-version=v5.6
Sequence

MSSDELKAKGNAAFSAGNFEEAAKFFTEAIGVDPGNHVLYSNRSASYASLKRYTDALDDA
KKCVSLKPDWAKGYSRLGAAYHGLGEYPEAIQAYEDGLKHDANSEQLKSALEEARAAAAA
PRRPGSIFSSPELLMKLAMDPRGKALLGQPDFMAMLGDIQNDPSRINMYLKDPRMQLVLE
LALGAKFGAPGGGEDEEPASATAHKEAESHKPASASHAHDKKPAPQPEPEHAEVSEEERE
AAAKKAAALKEKELGNEAYKKKEFETAIAHYNKAIELYDGDMTFLTNRAAVFFEQGEFDK
CVADCDAAVDKGREMRTDFKVIARALTRKGNALVKLNRLEDAIAAYNKSLMEHRNADTLA
LLHKTEKTLKERREADYINMELCEVEREKGNTAFKEQRYPEAVQAYQEALKRGPPAVNPE
AYKLYSNLAACYTKLGAYPEGVKAADKCIELKPDFAKGYSRKGTLQYFMKEYDKAIETYN
KGLELEPDSTELQEGLQRAVEAISRFASGQASAEEVKERQARSLSDPDIQNILKDPVMQQ
VLRDFQEDPRGAQKHLKSPEIMVKINKLVAAGIIQVK*

Transcript Sequence

Transcript ID

Cre03.g189950.t1.2
Transcript Infomation

pacid=30786610 locus=Cre03.g189950 annot-version=v5.6
Sequence

GATTGCTGCAAACCTGCACGTTGAGTAGGAATACAGAAACAGCATACACGGCATTTCTAT
TCGGAGATCCTCAAGACTAAACCGGGAGGACTGAGCCACGAAGAGCACGTAACCATGTCT
TCGGACGAGCTTAAGGCCAAGGGAAATGCCGCGTTCAGCGCGGGCAACTTCGAGGAGGCT
GCTAAGTTCTTCACGGAGGCAATTGGCGTGGACCCAGGCAACCACGTCCTCTACAGCAAC
CGCAGCGCGTCGTATGCGAGCCTCAAGCGGTATACCGATGCGCTGGATGACGCAAAGAAG
TGTGTGTCGCTCAAGCCTGACTGGGCCAAGGGCTACAGCCGCCTGGGTGCGGCCTATCAC
GGCCTGGGCGAGTACCCCGAGGCCATCCAGGCCTACGAGGACGGCCTGAAGCACGACGCC
AACAGCGAGCAGCTCAAGAGCGCGCTGGAGGAggcgcgcgccgccgccgccgcgccgcgc
cgccccggcTCCATCTTCTCCTCGCCCGAGCTGCTCATGAAGCTGGCCATGGACCCCCGC
GGCAAGGCGCTGTTGGGCCAGCCCGACTTTATGGCCATGCTGGGCGACATCCAGAACGAC
CCCTCCCGCATCAACATGTACCTCAAGGACCCGCGCATGCAGCTGGTGCTGGAGCTGGCT
CTGGGCGCAAAGTTCGGGGCGCCAGGCGGCGGAGAGGACGAGGAGCCGGCCAGCGCCACC
GCGCACAAGGAGGCTGAGTCACACAAGCCCGCCTCCGCCTCGCACGCACATGACAAGAAG
CCCGCGCCGCAGCCGGAGCCGGAGCATGCGGAGGTCAGCGAGGAGGAGCGGGAGGCTGCC
GCCAAGAAGGCTGCGGCCCTGAAGGAGAAGGAGCTTGGTAATGAGGCCTACAAGAAGAAG
GAGTTTGAGACGGCCATTGCCCACTACAACAAGGCCATTGAGCTGTACGACGGTGACATG
ACCTTCCTCACCAACCGCGCGGCCGTGTTCTTCGAGCAGGGCGAGTTCGACAAGTGCGTT
GCGGACTGCGACGCGGCGGTGGACAAGGGCCGCGAGATGCGCACCGACTTCAAGGTCATT
GCACGCGCACTCACGCGCAAGGGCAATGCGCTCGTCAAGCTCAACAGGCTTGAGGACGCC
ATCGCGGCCTACAACAAGTCGCTGATGGAGCACCGCAACGCCGACACCCTGGCGCTGCTG
CACAAGACCGAGAAGACGCTCAAGGAGCGGCGGGAGGCGGACTACATCAACATGGAGCTG
TGCGAGGTGGAGCGGGAAAAGGGCAACACCGCATTCAAGGAGCAGCGCTACCCAGAGGCT
GTGCAAGCCTACCAGGAGGCTCTCAAGCGCGGCCCGCCTGCCGTCAACCCGGAGGCCTAC
AAGCTCTACTCCAACCTGGCCGCCTGCTACACAAAGCTGGGCGCCTACCCAGAGGGCGTC
AAGGCCGCGGACAAGTGCATTGAGCTCAAGCCCGACTTCGCCAAGGGCTACAGCCGCAAG
GGCACGCTGCAGTACTTCATGAAGGAGTACGACAAGGCCATTGAGACGTACAACAAGGGC
CTGGAGCTGGAGCCCGACAGCACCGAGCTGCAGGAGGGGCTGCAGCGCGCCGTGGAGGCC
ATCAGCAGGTTCGCGAGCGGCCAGGCCAGTGCGGAGGAGGTCAAGGAGCGCCAGGCGCGG
TCGCTGTCCGACCCCGACATCCAAAACATCCTCAAGGACCCGGTCATGCAGCAGGTGCTG
CGTGACTTCCAGGAGGACCCCCGCGGCGCACAGAAGCACCTCAAGAGCCCCGAGATCATG
GTCAAGATCAACAAGCTGGTGGCGGCCGGCATCATCCAGGTCAAGTGATGAGGGACGGAT
GAGCGGCCGTCACTCTTGACAGAGGCGTTGGTGGTGtgttgttgttgttgttgttgGTAT
GCGAGGATGTGCGGTCTGTGCGTGGAGTGTGGAGCGTATGTGTGGAGCGGTCTCAGGGCA
ATAGGGGCGCCCATACCCCCGCGCCGGGCCCATCCGTGGCAAACGAAACCAGAGGAGCGC
GAGCGTTGACATTGTGCGCAGGAGGTTCACTAGAATAAGGTGTGGCTGCAAGGGAGGTGC
AAGACATGGAGTAGGGCAGTACGCGCAAGGCTGCAAGCTGCGTATGGCTGAGCGGTTGCA
GGCGGGCGGCAGTGATCGCCGCGCACTCGTCAGTATGGGAGCACCATTGCGTTGCTGATG
CTACGGTCTGCGGCTGAACCTAGCATCGCCGTTATTAATTGCGGATTTGCGGTATCGTGG
ATGCGGGCCTGAAGAAAGGCGCTGCCTCTTGCCAGTGGCGTTAAAGACAGGCTGTGTGAC
CGTTCGCTATAGTGCAGCTGACAGTTCAAGGCGATCACGGGGACTCGCCTGGGTGCGGCG
CAGACGCGCAGTCACAGCACAGTGTTTTGCGGGTGCCACTGGACTACAGCATCCGCGGCC
TTTTCAGGTTCTCCTGGTCTCGCCGGTTAGCTGGGCCCTCGGGCTGCACTGAGCTTACGG
ACTACTGG