Plant GARDEN
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TOP > About the Species(Chlamydomonas reinhardtii ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Chlamydomonas reinhardtii

CDS Sequence

CDS ID

Cre03.g178300.t1.2
CDS Infomation

pacid=30787482 polypeptide=Cre03.g178300.t1.2 locus=Cre03.g178300 ID=Cre03.g178300.t1.2.v5.5 annot-version=v5.6
Sequence

ATGGAAATCCATGGCTCCAACACCACCTTCAACCTCGAGAACGTGCTGCGTCAAAACATC
CTGAGCTCGGACTACTACAAGGGGACCTGCTCGGAACTGAGCAACTGTTCAGACATTGTG
GACGAAATCTACGAGTCTGTCGATCATGTGGAACCTTGGATGAGCGGCAACGCGCGCGGG
CCTTCCACGGCCTTCTGCCTTCTGCACCGCCTCTTCACGCTCAAGCTCTCAGCAAAGGAG
GTGAAAGGCATGCTGGACCACAAGGACTCTCCCTACATCCGCGCAGTGGGCTTCCTGTAC
CTGCGCTACGTGGGGGACCCGAAGACGCTGTGGAGCTGGGTGGCGCCGTACGTGAAGGAT
CAGGAGAAATTTTCGCCGAGCGGGCCGAACGAGAAGGAGGTGGCCATGGGCGACTACGTA
CGTGACCTGCTGCTCTCCCAGTACTACTTCGAGACCATCTTCCCGCGCATCCCGAAGCCC
GTGCAAGACCAAATCAACGACGAGCTGACGAAGCGCAGCCTGGCCACGACGGCCAAGGGC
AATGGCGGCGCCGGCGGCGCTGACCGCCGCGGCATGGACGACTCCGGCAACCGTCGACCC
GCCTCGGTGAAGGCGTCGCTGTCGGTCGCGTTCGGCCAGCGCGCGCCCAACCGCTCCGGT
GCTCGCGAGGAGGGTCGCGGCCGGGACCCATCGCTTGCGCAGCGCGACGGCACTGCAGCG
GCTCGCGGCGGCCGCGGCTCCGCCTCGCCGGAGCCGCCACGCGACCGGCGGGAGGCGCCG
GCACCGCGGCGGGATTTCGACCGGGAGCGGGACGTGCGCGGAGGCGGTGGTGGCGGCGCT
GACCGCCGTGACAACCGGGACTACGGCCGCGACCGGGACCGTGGTCGCGACTACGACAAG
AGCCGGGATTATGACAAGAGCCGGGATTACGCCAAGGGCAGGGACTATGACCGGGGGCGG
GACTACGGGCGCGGCGGTGGCGCTGGTGGTGGCGGCCGCGGCTACGATGACCGCCGGGAC
GAACGGCGGCGCAGCCGGAGCCGGAGCCGCAGCCGGGACCGCAACGGCGGCGGTGCTCGG
GACGCGCGCGATGTATTCAAGGACGCCCGGCGGTAG

Peptide Sequence

PEP ID

Cre03.g178300.t1.2
PEP Infomation

pacid=30787482 transcript=Cre03.g178300.t1.2 locus=Cre03.g178300 ID=Cre03.g178300.t1.2.v5.5 annot-version=v5.6
Sequence

MEIHGSNTTFNLENVLRQNILSSDYYKGTCSELSNCSDIVDEIYESVDHVEPWMSGNARG
PSTAFCLLHRLFTLKLSAKEVKGMLDHKDSPYIRAVGFLYLRYVGDPKTLWSWVAPYVKD
QEKFSPSGPNEKEVAMGDYVRDLLLSQYYFETIFPRIPKPVQDQINDELTKRSLATTAKG
NGGAGGADRRGMDDSGNRRPASVKASLSVAFGQRAPNRSGAREEGRGRDPSLAQRDGTAA
ARGGRGSASPEPPRDRREAPAPRRDFDRERDVRGGGGGGADRRDNRDYGRDRDRGRDYDK
SRDYDKSRDYAKGRDYDRGRDYGRGGGAGGGGRGYDDRRDERRRSRSRSRSRDRNGGGAR
DARDVFKDARR*

Transcript Sequence

Transcript ID

Cre03.g178300.t1.2
Transcript Infomation

pacid=30787482 locus=Cre03.g178300 annot-version=v5.6
Sequence

TATACACTATAGCGCGCCCTGGACACCTTACTTCAAACAGTGCGTATAGGTGAATCTTGC
CATCTTCCTCCACAGTATTGAGTCAGAGCTCTGACGCTGCTAGACTGCACAAGGTTTACC
TCCAACATTACAAGCTCGATAGCTGGGTCGCTGAACACACTAGACTTGTGGGCACGGCAG
GGGTGCAGAGCCGGGGCTGGCCACACGCCGGCGCTGCGGTGGAGCCCTGCGCGGCGCAGT
AGCCAGTGAGCAGATAGCACAATGGAAATCCATGGCTCCAACACCACCTTCAACCTCGAG
AACGTGCTGCGTCAAAACATCCTGAGCTCGGACTACTACAAGGGGACCTGCTCGGAACTG
AGCAACTGTTCAGACATTGTGGACGAAATCTACGAGTCTGTCGATCATGTGGAACCTTGG
ATGAGCGGCAACGCGCGCGGGCCTTCCACGGCCTTCTGCCTTCTGCACCGCCTCTTCACG
CTCAAGCTCTCAGCAAAGGAGGTGAAAGGCATGCTGGACCACAAGGACTCTCCCTACATC
CGCGCAGTGGGCTTCCTGTACCTGCGCTACGTGGGGGACCCGAAGACGCTGTGGAGCTGG
GTGGCGCCGTACGTGAAGGATCAGGAGAAATTTTCGCCGAGCGGGCCGAACGAGAAGGAG
GTGGCCATGGGCGACTACGTACGTGACCTGCTGCTCTCCCAGTACTACTTCGAGACCATC
TTCCCGCGCATCCCGAAGCCCGTGCAAGACCAAATCAACGACGAGCTGACGAAGCGCAGC
CTGGCCACGACGGCCAAGGGCAATGGCGGCGCCGGCGGCGCTGACCGCCGCGGCATGGAC
GACTCCGGCAACCGTCGACCCGCCTCGGTGAAGGCGTCGCTGTCGGTCGCGTTCGGCCAG
CGCGCGCCCAACCGCTCCGGTGCTCGCGAGGAGGGTCGCGGCCGGGACCCATCGCTTGCG
CAGCGCGACGGCACTGCAGCGGCTcgcggcggccgcggctccgcctcgccggagccgcca
cgcgaccggcgggaggcgccggcaccgcggcgggATTTCGACCGGGAGCGGGACGTGCGC
GGAGGCGGTGGTGGCGGCGCTGACCGCCGTGACAACCGGGACTACGGCCGCGACCGGGAC
CGTGGTCGCGACTACGACAAGAGCCGGGATTATGACAAGAGCCGGGATTACGCCAAGGGC
AGGGACTATGACcgggggcgggactacgggcgcggcggtggcgctggtggtggcggccgc
ggctacgatgaccgccgggacgaacggcggcgcagccggagccggagccgcagccgggac
cgcaacggcggcggtgCTCGGGACGCGCGCGATGTATTCAAGGACGCCCGGCGGTAGCGG
GCTTCGCGATGATAGCGCCATGTCAACCATGAAAGGGTTCAAGAAGATGGTGAATGAGTT
GGTGTTTCTAGGGCCTGTCCAGGTTTGTGCAAGGACATCGGTGTTGAGAGCTTGAGTAGT
AATTAGTAGTGCATGCGACAATACTTGAAACGAGTGCCTGGGGATGGGGCGGGCCCCAGT
GTGAAGTGTGTGCCAGCGGAAGCTGCACTGGTATGGAGGACAGATGGCATCAGACAGAGC
GACATCCGGTGGCTGGACGTTTCCGCCGTTCCTGCGCTTGCATGGCCGTCGCCCTAGCTA
CATGTTGACGGTCCAAATTGAGCGGAGCGTCACATTGAAACGCTTGACAGGATGAGGGTA
CGGGCATGAAAGCGCGTTGTCGTTGTACGCATCCATTTTGCAAGTCTAAGGCCTTGGGTA
TGCGTGTGTCGGCCAGGCTTGACATGTAGTCACGAAATTCACTTGAGATGACGCAGAGGC
GGGCAGACGCCTGTTGTAAATCTACGCGAGGAGGACTGCATAGTTCTGCTTAGCAAGGAT
TGTCGGCCAGTGTGGACCCATGGCGGCCTAGACTATATTGCATGTGCCTACAGAATTTTG
GGGACAGGCCGAAAGCTGGCATGGCCCAGGCCCCAACCCATGAGGCCAGGATGAAATGTA
GCCAGGGGC